Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00617 ATGTCAAGACTTCCGAAGGATGAACTGGTTGGGATAGAGTCTCGAGTTAGAGAATTAACAAATATTCTACGCTTGGATTCAATTAATGATGTTCTAGTTATTGGGATTAGTGGAATGGGTGGCATAGGAAAGACAACTCTTGCTCGAGCTTTATATGAAAGAATTTATCATCAATATGATTGTCGTTGTTTTATTGATGATGTGAGCAAGATTTATCGAGATTCTGGTTTATTAGGTGTACAAAAGCAGTTAATTTCCCAGTCTCTAAATGTGAAAAATCTTGAAATTTGTAATGCTATTGATGGAACATATTGGGTGTGGACTAGGCTGCACAATGCAAGAACACTTCTAGTTCTTGACAATGTTGATCAAGGTGAACAACTTAAGTTGTTCACATCAAATAGAGATATACGTGGATGTGTAGGTGAAGGGAGCAGAGTCGTCATAATTTCAAGAGATGAACATATATTGAAGACACATGGAATGGATGATGTTTATCAAGTCCAGATGTTGAGTTGGGAAAATGCTGTGCAGTTGTTTTGTAGAAATGCTTTCAAAGTTAATTATATATTGGATGATTATGAAGAGTTGGCATGTGAGGTACTTTCGCATGCTCAAGGTCATCCCTTGGCAATTGAAATAATTGGGTCATCTTTGTTTGGTCGAAATGTCTCACAATGGAGAAGTGCATTGAGTAAGCTAAGATATAATAAAGATAGAAATATTATGGATGTTTTACGAATAAGTTTTGATCAGTTGAAAGAAGAAGAAAAGGAAATATTTCTTGATATTGCATGCTTCCTCTACAGATGCGGTTATTCAAAGGATGAAGTGGAGAAATTTCTAAGATTTCGTGGATTTGATTATGAAAATGGCATACCAGCTCTAATTGAGAAATCTCTAATAACATGTGAAGATGGAGTTATTTATATGCATAGGTTGTTGATGGATTTGGGACAGAGTATTGTTAGAGAAAAATCACCTAAGGAGCCTCTAAAGTGGAGTAGGTTGTGGGATTACGAAGATTTCAAGAAAGCTATGTTAGACAATGAGCCATTGCAAAATTTGAAGCTTTTGGATCTCTCTTACTCCGAAGATTTAGTTGAGATGCCTGATGTTAGAGACACCCTAAATCTTGAAAAGATAGAACTTAAAGGATGCATAAAGCTCCGAAAAATCAATCCATCGATCGGTCTTTTGAAAAAGCTTGCTTTTATGAATTTGGGAAATTGCAAAAACCTAGTAAGCTTACCCCATACCATATTGGACTTGAATTCTCTTGAATATTTGAATGTCTCTGGCTGTTCAAAATTGTATAATAATGAGTTATTAGATGAACGAAGGAACAAGGATCATTTGAAAAAGCTTTGTTTAGTTGAAGCTCCTATTCTTTCCCAATCAACACCCACTTTCATAAAAAAAATGTTCTTGCAACCTTTAGATTTGTTGTTTCCCTCCTCTCCTACTCTTCCTTGTTCTCTCACTTGTTTGCATGAACTCGATCTAAGCTTCTGTAAATTAGTTCGAATCCCTGATGTCATTGGAAAGTTAAGTTGCCTAGAAAGGCTAAATTTGAAGGGAAACAATTTTACTACACTTCCCAACCTCCAAAACCTTTTCAGATTGTATCATTTAAACTTACAACATTGCAAGAAATTCAAACGATTGCCTGTTCTCCCTTTACAAACCGACTACTCCTCAGAATTTTGTAAGCTTCCACTCTCATATTTCACAGATGAAAAACTGGTAGGATTAATCATTTACAACTGCCCAAAATTAGTTGAGAGAGAACTTTGTACTAGCTTGATTTTTTCGTGGATGATACAAATTGTTCAGTCTTACGAGGCAAGGTTCTTTGAAAATGCGAGTAGTCAAATTAAACCATGTGTTGGAAGTGTTATCCCGGGAAGTGAACTACCGAGGTGGTTCAACAATCAGTTTGTGAGCATGGATAATTCAATAAGGATTGATACCTCTCTTGTTATGCATGACAATAATTGGATTGGTGTTGTGTGTTGTGCAATATTCCATGTGGGCAATGAAAGCGAGATCATTGATTATACATGCATAGATCGTAGTGCTAGAATTCCTCCAGTCGATTTGAGAACAGATCAAGTCATTGACCATTCAGATCATATGTGGCTATTTTATTTGTCTCGTCAAGAGTTTGGTGGAGGACATTATGATTTCAGATGGTACAAATCTTATAATGGCGTTATAAGTGTGGAATTTAGAAGACTGGTGATGGAATGGAGCGAATTCCGGAAGGACAAAGACCGATATGTTAATGTGTATGTGAAGAAATATGGGTATCGCAGGGTATATGAGAAAGATCGACAAATACCAAACTCAGGTACTTAA 2361 0.3604 MSRLPKDELVGIESRVRELTNILRLDSINDVLVIGISGMGGIGKTTLARALYERIYHQYDCRCFIDDVSKIYRDSGLLGVQKQLISQSLNVKNLEICNAIDGTYWVWTRLHNARTLLVLDNVDQGEQLKLFTSNRDIRGCVGEGSRVVIISRDEHILKTHGMDDVYQVQMLSWENAVQLFCRNAFKVNYILDDYEELACEVLSHAQGHPLAIEIIGSSLFGRNVSQWRSALSKLRYNKDRNIMDVLRISFDQLKEEEKEIFLDIACFLYRCGYSKDEVEKFLRFRGFDYENGIPALIEKSLITCEDGVIYMHRLLMDLGQSIVREKSPKEPLKWSRLWDYEDFKKAMLDNEPLQNLKLLDLSYSEDLVEMPDVRDTLNLEKIELKGCIKLRKINPSIGLLKKLAFMNLGNCKNLVSLPHTILDLNSLEYLNVSGCSKLYNNELLDERRNKDHLKKLCLVEAPILSQSTPTFIKKMFLQPLDLLFPSSPTLPCSLTCLHELDLSFCKLVRIPDVIGKLSCLERLNLKGNNFTTLPNLQNLFRLYHLNLQHCKKFKRLPVLPLQTDYSSEFCKLPLSYFTDEKLVGLIIYNCPKLVERELCTSLIFSWMIQIVQSYEARFFENASSQIKPCVGSVIPGSELPRWFNNQFVSMDNSIRIDTSLVMHDNNWIGVVCCAIFHVGNESEIIDYTCIDRSARIPPVDLRTDQVIDHSDHMWLFYLSRQEFGGGHYDFRWYKSYNGVISVEFRRLVMEWSEFRKDKDRYVNVYVKKYGYRRVYEKDRQIPNSGT* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00617 786 Pfam NB-ARC domain 14 237 IPR002182 GO:0043531
Phac10g00617 786 ProSiteProfiles Leucine-rich repeat profile. 519 540 IPR001611 GO:0005515
Phac10g00617 786 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 439 IPR044974 GO:0006952
Phac10g00617 786 Pfam C-JID domain 634 779 IPR045344 -
Phac10g00617 786 Gene3D - 3 165 IPR027417 -
Phac10g00617 786 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 264 IPR027417 -
Phac10g00617 786 SUPERFAMILY L domain-like 331 669 - -
Phac10g00617 786 Gene3D Ribonuclease Inhibitor 332 475 IPR032675 -
Phac10g00617 786 PRINTS Disease resistance protein signature 351 367 - -
Phac10g00617 786 PRINTS Disease resistance protein signature 33 48 - -
Phac10g00617 786 PRINTS Disease resistance protein signature 109 123 - -
Phac10g00617 786 PRINTS Disease resistance protein signature 205 219 - -
Phac10g00617 786 Gene3D Ribonuclease Inhibitor 484 667 IPR032675 -
Phac10g00617 786 Gene3D - 170 254 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00617 Phac-Chr10 7556908 7560319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00617 340 560 WRKY Transcription Factor Family AT5G45050 28.000 5.71e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00617 - - pvu:PHAVU_010G055100g 928.317