Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00616 ATGGATGTTTTACGTATAAGTTTTGATCAGTTGGAAGAAGAAGAAAAAGAAATATTTCTTGATATTGCATGTTTTCTCACCAGTGAGTATGAAAGTATGTGTTACTCAAAGGATGAAGTGGAGACAATTCTAAGCTTCCGTGGATTTGATTACAAAAATGGCATACCAGCTCTGATTGAGAAATCTCTAATAACATGTAGACTTGGGGATATTTATATGCATAGGTTGTTGAGGGATTTGGGACAGAGTATTGTTAGAGAAAAATCACCTAAGGAGCCTCTAAAGTGGAGTAGGTTGTGGAATTACAAAGATTTCAAGAAAGCTATGTCAGAGAATGAGGCAACTGGAAATCTTGAAGTCATATATATTGAATGTATTTGGGGTGTTTCAGAGACTCTGAGGGCAGATGGTCTATCAAAAATTAGACACCTTAACTTGCTTAGTCTTGAGGGTGTGAACTTTTCAGGAAGTCTGAATCATCTTTCGAATGAACTAGCGTACCTTAATTGGAGTGAATATCCTTTTAAATGTTTGCCTCAAAGTTTTCAGCCAGAAAATCTAGTTGCATTACGCCTTGTTGAAAGCAGTATTAAACAACTATGGAAAGGCACAAAGCCATTGCACAATTTGAAGCTTTTGAATCTCTCTTACTCCAGACAATTAGTTGAGATGCCAGATGTTAAAGAGGCCCTAAATCTTGAAATGATAGAACTTCAAGGATGCATAAAGCTTCGAAAAATCAATCCATCAATCGGTCTTTTGAAAAAAATGGTTGCTTTGAATTTGGAAAACTGCAAAAACCTAGAAAGCTTACCCAATACCATATTGGGCCTGAATTCTCTTGAATATCTGAATGTCTCTGGCTGTTCAAAATTGTATAATAATGAGTTATTAGATGAACGAAGGAACACAGAGCATTTGAAGAAGCTTTGTTTAGTTGAAGCTCCTATTCTTTCCCAGTTAACATTCTCTCTCACTTGTTTGCGTGAACTCAATCTAAGCTTCTGTAACTTAATTCGAATCCCTGATGTCATTGGGAAGTTAAGGTGTCTTGAATGGCTAAATTTGAAGGGAAACAATTTTACTACACTTCCCAACCTCCAGAACCTTTTCAGACTGTATCATTTAAACTTACAACATTGCAAGCAATTGAAACGCTTGCCTGCTCTCCCTTTGCAAACCGACTACTTCTTAGAATTTTGCAAGCTTCCACTTGCATATTCCACAGATGAAGAAATGACAGGATTAATAATTTACAATTGCCCAGAATTAGTTGAGAGGGAACACTATACTAGCTTGATTTCTTCGTGGATGATACAAATTTTTCAGTCTTACGAGGCGAGGTGCTTAGAAAATGAGCAAAGAAGTTACATGAATCCATGTGTTGGAAGTGTTATCCCGGGAAGTCAAATACCGAGGTGGTTCAATAATCAGTTTGTCGTGAGCACGGACAATTCAATAAGGATTGATGCCTCTCCTCTTATGCATGACAATAATTGTATTGGTGTTATGTGTTGTGCAATATTTCACATGGGCAATGAAAGGGAGATGACTGGTAATATATCCACGGATCATAAACATAGAATTCCTCCAGTCAATTTGAGAACATATCTAGTCATTGACCAGTCAGATCATATGTGGCTATTTTATTTGTCTCGTCGAGATTTTCATGCGCAAAGTTATTATTGCAGATGGTACAAATCTTATAATGGTATTATTAGTGTGAAATTTAAAAAACTGATAATGGACGGGAGCCAAATCTACCCAAGAGAAAACCAATATGTTAAGGTGTATGTGAAGAAATATGGGTATCGCTGGGTATATAAGCAAGATCGACAACTACCAGTCTCATGTACTTAA 1860 0.3667 MDVLRISFDQLEEEEKEIFLDIACFLTSEYESMCYSKDEVETILSFRGFDYKNGIPALIEKSLITCRLGDIYMHRLLRDLGQSIVREKSPKEPLKWSRLWNYKDFKKAMSENEATGNLEVIYIECIWGVSETLRADGLSKIRHLNLLSLEGVNFSGSLNHLSNELAYLNWSEYPFKCLPQSFQPENLVALRLVESSIKQLWKGTKPLHNLKLLNLSYSRQLVEMPDVKEALNLEMIELQGCIKLRKINPSIGLLKKMVALNLENCKNLESLPNTILGLNSLEYLNVSGCSKLYNNELLDERRNTEHLKKLCLVEAPILSQLTFSLTCLRELNLSFCNLIRIPDVIGKLRCLEWLNLKGNNFTTLPNLQNLFRLYHLNLQHCKQLKRLPALPLQTDYFLEFCKLPLAYSTDEEMTGLIIYNCPELVEREHYTSLISSWMIQIFQSYEARCLENEQRSYMNPCVGSVIPGSQIPRWFNNQFVVSTDNSIRIDASPLMHDNNCIGVMCCAIFHMGNEREMTGNISTDHKHRIPPVNLRTYLVIDQSDHMWLFYLSRRDFHAQSYYCRWYKSYNGIISVKFKKLIMDGSQIYPRENQYVKVYVKKYGYRWVYKQDRQLPVSCT* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00616 619 Pfam C-JID domain 466 612 IPR045344 -
Phac10g00616 619 SUPERFAMILY L domain-like 73 392 - -
Phac10g00616 619 ProSiteProfiles Leucine-rich repeat profile. 350 371 IPR001611 GO:0005515
Phac10g00616 619 Gene3D Ribonuclease Inhibitor 315 407 IPR032675 -
Phac10g00616 619 Gene3D Ribonuclease Inhibitor 115 302 IPR032675 -
Phac10g00616 619 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 293 IPR044974 GO:0006952
Phac10g00616 619 SUPERFAMILY "Winged helix" DNA-binding domain 2 107 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00616 Phac-Chr10 7517530 7521509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00616 11 366 WRKY Transcription Factor Family AT4G12020 35.589 2.42e-48 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00616 - - pvu:PHAVU_010G055200g 905.205