Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00613 ATGTCAAAACTTCCGAAGGATGAATTGGTTGGGATAGAGTCTCGGGTTGAAGAATTAACTAATCTTCTACGGTTAGATTTAGTTAATGATGTTCGAGTTGTTGGAATTAGTGGGATGGGTGGCATAGGAAAGACAACTCTTGCTCAAGCTTTATACGAAAGAATCTCTCATCAATATGATTTTCATTGTTTTATTGATGATGTGAGCAAAATTTATAGAGATTCTAGTTTACTAGGTGTTCAAAAGGAGCTAATTACTCGGTGTCTAAGTGAGAAAAATCTTGAAATTTGTAATGTTATTGACGGAACATATTTGGTGTGGACTAGGCTGCACAATGCAAGAACACTTCTAGTTCTTGACAATGTTGATCAAGGTGCACAACTTAAGCTATTCACAGGGAACAGAGATATACGTAGATGTGTAGGTGGAGGGAGCAGAATCATCATAATTTCAAGGGATGAACATATTTTGAAGACACATGGAGTGGATGATGTTTATCAAGTCCAATTGTTGAGTTGGGAAAATGCTGTGCAGTTGTTTTGTATAAATGCTTTCAAAGTTAATTATATATTGGACGATTATGAAGAGTTGGCACGTGAGGTACTTTCACATGCTCAAGGTCATCCCTTGGGAATTGAAGTAATTGGATCATCTTTGTTTGGTCGAAATATCTCACAATGGAGAAGTGCATTGGGTAGGCTAAGATATAATAAAGACAAAAATATTATGAATGTTTTACGTATAAGTTTTGATCAGTTGGAAGAAGAAGAAAAAGAAATATTCCTTGATATTGCATGTTTCCTTCATAATCACTTCTATTATAATGAAATTTTAAGCATTCGTGGATTTGATTATGAAAATGGCATTCCAGCTCTCATCGAGAAATCTCTCATAACATGTGAATATGGGGATATTTATATGCATAGGTTGTTGATGGATTTGGGACAAAGTATTGTTAGAGAAAAATCACCTAAGGAACCTCTAAAGTGGAGTAGGTTATGGGATTGCAAAGATTTCGAGAAAGCTATGTTAGACAATGAGGCATCTGAAAATCTTGAAGTCATATATATTGAATGTGATTTGCTTTTGGGGACAGTGAGGGCAGATGGTCTATCGAAAGTTAGACACCTTAAGTTGCTTAAACTTGAAGATGTGAATTTTTCAGGCAGTCTCAATCATCTTTCGAATGAACTAGCATATCTTAATTGGAAGGAATATCCTTTTAAATGTTTGCCTCAAAGTTTTCAGCCAGAAAAACTAGTTGAGTTATACCTTGTTGGGAGCAGTATTAAGCGACTATGGGAAGGCACAAAGCCATTGCACAATTTGAAGCTTTTGGATCTCTCTTACTCTGAAGATTTAGTTGAGATGCCAGATGTTAGAGAGGCCCTAAATCTTGAAAAGATAAAACTTAAAGGATGTATAAAGCTCCCAAAAATCAATCCATCAATCGGTCTTTTGAAAAAGCTTTCATTGTTGAATTTGAGAAACTGCAAAAACCTAGTAAGCTTACCCAATACCATTTTGGGCCTGAATTCTCTTGAATATCTGGATGTCTCTGGATGTTCAAAACTTTGTTTGGTTGAAGCTACTATTCTTTCCCAATCAACATCCTTTTTTATAAAAAAAATGTTGTATTCCAGAGCACAAAGAGACTTAGTCAGCTATTTATTGCCCTCCTCTCCTACTTCCCCTTCTTCTCTCACTTGTTTGCGTGAACTCGATCTAAGCTTCTGTAACTTAGTTCGAATCCCTGATGCCATTGGAAAGTTAAGTTGCCTAGAACACCTAAATTTGGAGGGTAACAATTTTACCACACTTCCCAACCTCGATAACCTTTTCAGACTGTATCATTTAAACTTACAACATTGCAAGCGATTCAAACACTTTCCTGTTCTCCCTTCCCAAACCGACTTTCCCTCAGAAACTTGCAAACTTCCACTACCATATTTGACATATGAAGATTTGGTAGGACTAATCCTTTATAATTGCCCAGAATTAGTTGAGAGGGAACACTGTAATAGCATGATTTTTTCGTGGATGATACAAATTTTTCAGTCTTACGAGGCGAGGTGCTCAAGAAACACATGTAGTCTCAAATTACGTCCAAATATTGCCTGTGTTATCCCAGGAAGTGAAATACCGAGGTGGTTCAACAATCAGTTTGGGAGCATGGACAATTCAATAAGGATTGATACCTCTCCTGTTATGCATGACAATAATTGGATTGGTGTAATGTGTTGCGCAATATTTCACATGGACATTGAAAGAGATATGACTGGTTATAGATCCATAGATCGTAGTGCTAGAATTCCTCCAATCGATTTGAGGAGCGATCTAGTCATCGACCATTCGGATCATATGTGGCTATTTTATTTGTCTCATCAAGAGTTTGGTGAACGACGTTATGATTGCAGATGGTACACATCTTATAATGGGGTTATTAGTGTGGAATTTACAAAATTGATGATGGACACGGGCGAATTCGAGAAGGGAGAACACCAATATGTTAAGGTGTATGTGAAGAAATATGGGTATCGGTGGGTATATGAGAAAGATCGACAACTACCAAACTCAGGATCAAGGATAGACATCCCACAGTTCTTTGGAACATCTTTACACGAGTACTCCTTTAAGGCATGTAGCCAAGAAGTTATTTTGCAATTGATGCAGTAG 2676 0.37 MSKLPKDELVGIESRVEELTNLLRLDLVNDVRVVGISGMGGIGKTTLAQALYERISHQYDFHCFIDDVSKIYRDSSLLGVQKELITRCLSEKNLEICNVIDGTYLVWTRLHNARTLLVLDNVDQGAQLKLFTGNRDIRRCVGGGSRIIIISRDEHILKTHGVDDVYQVQLLSWENAVQLFCINAFKVNYILDDYEELAREVLSHAQGHPLGIEVIGSSLFGRNISQWRSALGRLRYNKDKNIMNVLRISFDQLEEEEKEIFLDIACFLHNHFYYNEILSIRGFDYENGIPALIEKSLITCEYGDIYMHRLLMDLGQSIVREKSPKEPLKWSRLWDCKDFEKAMLDNEASENLEVIYIECDLLLGTVRADGLSKVRHLKLLKLEDVNFSGSLNHLSNELAYLNWKEYPFKCLPQSFQPEKLVELYLVGSSIKRLWEGTKPLHNLKLLDLSYSEDLVEMPDVREALNLEKIKLKGCIKLPKINPSIGLLKKLSLLNLRNCKNLVSLPNTILGLNSLEYLDVSGCSKLCLVEATILSQSTSFFIKKMLYSRAQRDLVSYLLPSSPTSPSSLTCLRELDLSFCNLVRIPDAIGKLSCLEHLNLEGNNFTTLPNLDNLFRLYHLNLQHCKRFKHFPVLPSQTDFPSETCKLPLPYLTYEDLVGLILYNCPELVEREHCNSMIFSWMIQIFQSYEARCSRNTCSLKLRPNIACVIPGSEIPRWFNNQFGSMDNSIRIDTSPVMHDNNWIGVMCCAIFHMDIERDMTGYRSIDRSARIPPIDLRSDLVIDHSDHMWLFYLSHQEFGERRYDCRWYTSYNGVISVEFTKLMMDTGEFEKGEHQYVKVYVKKYGYRWVYEKDRQLPNSGSRIDIPQFFGTSLHEYSFKACSQEVILQLMQ* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00613 891 Gene3D - 171 254 IPR042197 -
Phac10g00613 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 264 IPR027417 -
Phac10g00613 891 SUPERFAMILY "Winged helix" DNA-binding domain 241 339 IPR036390 -
Phac10g00613 891 Pfam NB-ARC domain 15 236 IPR002182 GO:0043531
Phac10g00613 891 SUPERFAMILY L domain-like 358 716 - -
Phac10g00613 891 Gene3D - 3 165 IPR027417 -
Phac10g00613 891 ProSiteProfiles Leucine-rich repeat profile. 593 614 IPR001611 GO:0005515
Phac10g00613 891 SMART LRR_typ_2 591 616 IPR003591 -
Phac10g00613 891 SMART LRR_typ_2 568 590 IPR003591 -
Phac10g00613 891 Pfam C-JID domain 709 854 IPR045344 -
Phac10g00613 891 PRINTS Disease resistance protein signature 109 123 - -
Phac10g00613 891 PRINTS Disease resistance protein signature 438 454 - -
Phac10g00613 891 PRINTS Disease resistance protein signature 33 48 - -
Phac10g00613 891 PRINTS Disease resistance protein signature 205 219 - -
Phac10g00613 891 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 527 IPR044974 GO:0006952
Phac10g00613 891 Gene3D Ribonuclease Inhibitor 549 677 IPR032675 -
Phac10g00613 891 Gene3D Ribonuclease Inhibitor 334 544 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00613 Phac-Chr10 7394699 7401098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00613 8 829 WRKY Transcription Factor Family AT5G45050 28.256 3.21e-75 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00613 - - pvu:PHAVU_010G055200g 1377.46