Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00611 ATGGCTTCTAACGCCATCATCCAATACACCTCTTCTTCTTCATCTCCTGCAACTCACATCTACGACGTTTTTGTGAGCTTCCGCGGTGAAGACACGCGCAACAACTTCACTGATTTTCTCTTTCATGCTCTCCGTACAAAAGGCATCCATGTCTTCAAAGATGATGAAGATCTCAAAAAAGGTGAATCCATTGCACCCGAGCTGCTGCAAGCCATTCAAGCCTCTCGACTTTTCATTGTTGTCTTCTCACAGAACTATGCTTCCTCCACCTGGTGCTTGCGTGAATTGGCGGAGATATGTAACTGCTTTGAAGCTTCGCCAAGACGTGTTATTATACCTATTTTTTATGATGTTCGTCCTTCGGTGGTGCGCAAACAGAGTGGACGTTATGAGAAAGCATTTGCAGAACACGAAAAGAGATTCAAAGAAGATGGAGTGAAGATGAAGGAAGTTCATAGATGGAGAGAAGCTCTCACACAAGTGGCTGATCTCTCTGGTTGGGATATCCGAAACAAGTCACAGTCTGAACAGATTGGAAAAATCATTCAAACCGTAATAAATATTTTGGGACCCAAAATGTCAAAACTTCCGAAGGATGAATTGGTTGGGATAGAGTCTCGGGTTGAAGAATTAACTAATCTTCTACGGTTAGATTTAGTTAATGATGTTCGAGTTGTTGGAATTAGTGGGATGGGTGGCATAGGAAAGACAACTCTTGCTCAAGCTTTATACGAAAGAATCTCTCATCAATATGATTTTCATTGTTTTATTGATGATGTGAGCAAAATTTATAGAGATTCTAGTTTACTAGGTGTTCAAAAGGAGCTAATTACTCGGTGTCTAAGTGAGAAAAATCTTGAAATTTGTAATGTTATTGACGGAACATATTTGGTGTGGACTAGGCTGCACAATGCAAGAACACTTCTAGTTCTTGACAATGTTGATCAAGGTGCACAACTTAAGCTATTCACAGGGAACAGAGATATACGTAGATGTGTAGGTGGAGGGAGCAGAATCATCATAATTTCAAGGGATGAACATATTTTGAAGACACATGGAGTGGATGATGTTTATCAAGTCCAATTGTTGAGTTGGGAAAATGCTGTGCAGTTGTTTTGTATAAATGCTTTCAAAGTTAATTATATATTGGACGATTATGAAGAGTTGGCACGTGAGGTACTTTCACATGCTCAAGGTCATCCCTTGGGAATTGAAGTAATTGGATCATCTTTGTTTGGTCGAAATATCTCACAATGGAGAAGTGCATTGGGTAGGCTAAGATATAATAAAGACAAAAATATTATGAATGTTTTACGTATAAGTTTTGATCAGTTGGAAGAAGAAGAAAAAGAAATATTCCTTGATATTGCATGTTTCCTTCATAATCACTTCTATTATAATGAAATTTTAAGCATTCGTGGATTTGATTATGAAAATGGCATTCCAGCTCTCATCGAGAAATCTCTCATAACATGTGAATATGGGGATATTTATATGCATAGGTTGTTGATGGATTTGGGACAAAGTATTGTTAGAGAAAAATCACCTAAGGAACCTCTAAAGTGGAGTAGGTTATGGGATTGCAAAGATTTCGAGAAAGCTATGTTAGACAATGAGGCATCTGAAAATCTTGAAGTCATATATATTGAATGTGATTTGCTTTTGGGGACAGTGAGGGCAGATGGTCTATCGAAAGTTAGACACCTTAAGTTGCTTAAACTTGAAGATGTGAATTTTTCAGGCAGTCTCAATCATCTTTCGAATGAACTAGCATATCTTAATTGGAAGGAATATCCTTTTAAATGTTTGCCTCAAAGTTTTCAGCCAGAAAAACTAGTTGAGTTATACCTTGTTGGGAGCAGTATTAAGCGACTATGGGAAGGCACAAAGCCATTGCACAATTTGAAGCTTTTGGATCTCTCTTACTCTGAAGATTTAGTTGAGATGCCAGATGTTAGAGAGGCCCTAAATCTTGAAAAGATAAAACTTAAAGGATGTATAAAGCTCCCAAAAATCAATCCATCAATCGGTCTTTTGAAAAAGCTTTCATTGTTGAATTTGAGAAACTGCAAAAACCTAGTAAGCTTACCCAATACCATTTTGGGCCTGAATTCTCTTGAATATCTGGATGTCTCTGGATGTTCAAAACTTTGTTTGGTTGAAGCTACTATTCTTTCCCAATCAACATCCTTTTTTATAAAAAAAATGTTGTATTCCAGAGCACAAAGAGACTTAGTCAGCTATTTATTGCCCTCCTCTCCTACTTCCCCTTCTTCTCTCACTTGTTTGCGTGAACTCGATCTAAGCTTCTGTAACTTAGTTCGAATCCCTGATGCCATTGGAAAGTTAAGTTGCCTAGAACACCTAAATTTGGAGGGTAACAATTTTACCACACTTCCCAACCTCGATAACCTTTTCAGACTGTATCATTTAAACTTACAACATTGCAAGCGATTCAAACACTTTCCTGTTCTCCCTTCCCAAACCGACTTTCCCTCAGAAACTTGCAAACTTCCACTACCATATTTGACATATGAAGATTTGGTAGGACTAATCCTTTATAATTGCCCAGAATTAGTTGAGAGGGAACACTGTAATAGCATGATTTTTTCGTGGATGATACAAATTTTTCAGTCTTACGAGGCGAGGTGCTCAAGAAACACATGTAGTCTCAAATTACGTCCAAATATTGCCTGTGTTATCCCAGGAAGTGAAATACCGAGGTGGTTCAACAATCAGTTTGGGAGCATGGACAATTCAATAAGGATTGATACCTCTCCTGTTATGCATGACAATAATTGGATTGGTGTAATGTGTTGCGCAATATTTCACATGGACATTGAAAGAGATATGACTGGTTATAGATCCATAGATCGTAGTGCTAGAATTCCTCCAATCGATTTGAGGAGCGATCTAGTCATCGACCATTCGGATCATATGTGGCTATTTTATTTGTCTCATCAAGAGTTTGGTGAACGACGTTATGATTGCAGATGGTACACATCTTATAATGGGGTTATTAGTGTGGAATTTACAAAATTGATGATGGACACGGGCGAATTCGAGAAGGGAGAACACCAATATGTTAAGGTGTATGTGAAGAAATATGGGTATCGGTGGGTATATGAGAAAGATCGACAACTACCAAACTCAGGCTAG 3159 0.3811 MASNAIIQYTSSSSSPATHIYDVFVSFRGEDTRNNFTDFLFHALRTKGIHVFKDDEDLKKGESIAPELLQAIQASRLFIVVFSQNYASSTWCLRELAEICNCFEASPRRVIIPIFYDVRPSVVRKQSGRYEKAFAEHEKRFKEDGVKMKEVHRWREALTQVADLSGWDIRNKSQSEQIGKIIQTVINILGPKMSKLPKDELVGIESRVEELTNLLRLDLVNDVRVVGISGMGGIGKTTLAQALYERISHQYDFHCFIDDVSKIYRDSSLLGVQKELITRCLSEKNLEICNVIDGTYLVWTRLHNARTLLVLDNVDQGAQLKLFTGNRDIRRCVGGGSRIIIISRDEHILKTHGVDDVYQVQLLSWENAVQLFCINAFKVNYILDDYEELAREVLSHAQGHPLGIEVIGSSLFGRNISQWRSALGRLRYNKDKNIMNVLRISFDQLEEEEKEIFLDIACFLHNHFYYNEILSIRGFDYENGIPALIEKSLITCEYGDIYMHRLLMDLGQSIVREKSPKEPLKWSRLWDCKDFEKAMLDNEASENLEVIYIECDLLLGTVRADGLSKVRHLKLLKLEDVNFSGSLNHLSNELAYLNWKEYPFKCLPQSFQPEKLVELYLVGSSIKRLWEGTKPLHNLKLLDLSYSEDLVEMPDVREALNLEKIKLKGCIKLPKINPSIGLLKKLSLLNLRNCKNLVSLPNTILGLNSLEYLDVSGCSKLCLVEATILSQSTSFFIKKMLYSRAQRDLVSYLLPSSPTSPSSLTCLRELDLSFCNLVRIPDAIGKLSCLEHLNLEGNNFTTLPNLDNLFRLYHLNLQHCKRFKHFPVLPSQTDFPSETCKLPLPYLTYEDLVGLILYNCPELVEREHCNSMIFSWMIQIFQSYEARCSRNTCSLKLRPNIACVIPGSEIPRWFNNQFGSMDNSIRIDTSPVMHDNNWIGVMCCAIFHMDIERDMTGYRSIDRSARIPPIDLRSDLVIDHSDHMWLFYLSHQEFGERRYDCRWYTSYNGVISVEFTKLMMDTGEFEKGEHQYVKVYVKKYGYRWVYEKDRQLPNSG* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00611 1052 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 190 - -
Phac10g00611 1052 Gene3D - 363 446 IPR042197 -
Phac10g00611 1052 SUPERFAMILY "Winged helix" DNA-binding domain 433 531 IPR036390 -
Phac10g00611 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 456 IPR027417 -
Phac10g00611 1052 PRINTS Disease resistance protein signature 301 315 - -
Phac10g00611 1052 PRINTS Disease resistance protein signature 225 240 - -
Phac10g00611 1052 PRINTS Disease resistance protein signature 397 411 - -
Phac10g00611 1052 PRINTS Disease resistance protein signature 630 646 - -
Phac10g00611 1052 ProSiteProfiles Leucine-rich repeat profile. 785 806 IPR001611 GO:0005515
Phac10g00611 1052 SMART LRR_typ_2 783 808 IPR003591 -
Phac10g00611 1052 SMART LRR_typ_2 760 782 IPR003591 -
Phac10g00611 1052 Pfam NB-ARC domain 207 428 IPR002182 GO:0043531
Phac10g00611 1052 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 167 IPR035897 -
Phac10g00611 1052 Pfam TIR domain 21 195 IPR000157 GO:0007165
Phac10g00611 1052 Gene3D - 192 356 IPR027417 -
Phac10g00611 1052 Gene3D Ribonuclease Inhibitor 536 727 IPR032675 -
Phac10g00611 1052 Gene3D Ribonuclease Inhibitor 728 870 IPR032675 -
Phac10g00611 1052 Pfam C-JID domain 901 1046 IPR045344 -
Phac10g00611 1052 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 721 IPR044974 GO:0006952
Phac10g00611 1052 Gene3D - 16 191 IPR035897 -
Phac10g00611 1052 SMART till_3 20 164 IPR000157 GO:0007165
Phac10g00611 1052 ProSiteProfiles TIR domain profile. 19 189 IPR000157 GO:0007165
Phac10g00611 1052 SUPERFAMILY L domain-like 551 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00611 Phac-Chr10 7394699 7401098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00611 21 840 WRKY Transcription Factor Family AT4G12020 28.821 2.68e-77 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00611 - - pvu:PHAVU_010G055200g 1645.94