Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00604 ATGAGAAAACGTATCAGTATGGAAAGTGATGCTGACTTCTTCAATTCCTTTGCCACATCCTCCTCCTCCTCTACTTCCACTTCCACTTCTACCACCACCACCACCACAACCCCTTCAATCTTCATTGATACCAACACTTCTAGCACATCATCATCATCTTCAACACCCTGCACATCTTCTACCTCAAACTCAGATTCATGCATCAAAGAACACTCCAAGACCCCTCAAGATGACTCAACAACTCCTCAAACCTCGTTGGAAAATGAGAAGGACTCAAAGGGGTGCAAGAAGAGGCAGAGGGAGAATCCCAGCAATCAGAACTACCCTACTTATAGGGGTGTGAGGATGAGGAACTGGGGCAAATGGGTGTCTGAAATCCGTGAGCCAAGGAAGAAATCAAGAATTTGGCTTGGAACATACCCTACAGCAGAAATGGCTGCTAGAGCACATGATGTGGCTGCCTTAGCCATCAAGGGCCATTCTGCATACCTCAATTTCCCTGAATTGGCTCAAGAACTTCCAAGGCCAGCTACCACATCACCCAAGGACATTCAAGCTGCAGCTGCAAAAGCAGCAAACACATCCTTTGAGGTGGTTAAGCATTGCCAAAGTACTACTACTATTGAAGATGAAGAAGAAGGAGAAGAACCAAACCAAGCAGAACATGCCTCATCTTCAACTCTCTCAATGGACAACACACAAGAATCTTCAAGCTCTCACTCTACCAATGATGATGACACTTTGTTTGACCTACCAGATCTTTTCCCTGATCAACTTTGCTCCTATTCTTCTTCTTGGCATTTGTGTGCAGTTGGTAGTGGATTTAGGCTTGAGGAGTCACTTTTTTGGGAGAATTATTAG 861 0.4483 MRKRISMESDADFFNSFATSSSSSTSTSTSTTTTTTTPSIFIDTNTSSTSSSSSTPCTSSTSNSDSCIKEHSKTPQDDSTTPQTSLENEKDSKGCKKRQRENPSNQNYPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQELPRPATTSPKDIQAAAAKAANTSFEVVKHCQSTTTIEDEEEGEEPNQAEHASSSTLSMDNTQESSSSHSTNDDDTLFDLPDLFPDQLCSYSSSWHLCAVGSGFRLEESLFWENY* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00604 286 Gene3D AP2/ERF domain 110 168 IPR036955 GO:0003700|GO:0006355
Phac10g00604 286 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Phac10g00604 286 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Phac10g00604 286 FunFam Ethylene-responsive transcription factor 2 110 168 - -
Phac10g00604 286 MobiDBLite consensus disorder prediction 220 245 - -
Phac10g00604 286 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 64 258 - -
Phac10g00604 286 MobiDBLite consensus disorder prediction 12 69 - -
Phac10g00604 286 ProSiteProfiles AP2/ERF domain profile. 110 167 IPR001471 GO:0003700|GO:0006355
Phac10g00604 286 MobiDBLite consensus disorder prediction 203 245 - -
Phac10g00604 286 SUPERFAMILY DNA-binding domain 110 168 IPR016177 GO:0003677
Phac10g00604 286 Pfam AP2 domain 109 160 IPR001471 GO:0003700|GO:0006355
Phac10g00604 286 MobiDBLite consensus disorder prediction 1 112 - -
Phac10g00604 286 CDD AP2 111 169 IPR001471 GO:0003700|GO:0006355
Phac10g00604 286 SMART rav1_2 110 173 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00604 Phac-Chr10 7337384 7338706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00604 97 282 AP2-EREBP Transcription Factor Family AT2G44940 54.067 4.19e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac10g00604 AP2 3.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00604 - - gsj:114420351 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g00604 10 7337384 7338706 Phac10g00604 10 7337384 7338706 ECH