Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00586 ATGTCTGTCCACCGCCATGTTTGCAACACCTCAAAGCTATCAAAGATCCCTTGGAAGTACAAGAAGTTCGCCATAGCACAGGGCCAGAAGTCTCTCACTGATTATCTCCACGCCACGCGCTGCATTCCTTACGCCTTCGCTGATCAAATCTCCAAGAATTCCAACACTGCCCTCATTAACCTCATCACCAAGCTCACTTCTTTCTCCCCTCCCCACTATCCCCACAACCTCAACAAGTTCCTCAGGTACAACCCCATCAACGAATTTGAATTCTTCTTTGAGAGCATTGGCATACACCCCTCCAAGTTCCCCTCTTTGTTTCCCCAGAACAAGTTCTTCTTTTCAGAAGATGGGACCCTTTTGGATGCTGCTTGTGTTCTCAGCGAATTTGGGTTTCCCTGGGACAAGCTTGGGGTGCTGTATGTGGAGAGTGGGTGTGTGTTCAACTGGGGTGTTTCTGAGTTGAAGGGTAGGCTTTGTGGGTTCAAAAAGTATGGTTTTTGCAATATGCAGGTTGTGGGGATATGCCTGGCTTTCCCCTTTGTGTTTGATGGCCAGAAGGGTGTTGAGGTTGAGGCTTTGTTTTGTGATCTGAGGTTGCTTTTTGGGAAGTTTGGTTTGGCTGGGTGTGTTGAAGAGAAGGGGAATGGTGTGGATGATTGGGTTGGGGTGTGTAGGAAGATAAGGTTGTTTTATGATTTGATTGGAGGGAAGAACATAGGGGAGTTCATTGGAGGGAACAATGGTGTTGGGGTAGGTGTTATTGTTGAGCATGGGGAAGAGGAGTTGGTTCAAGCAATTGAGTATTTTTGTAGGTTTGGTGCAAAGAAAGAGGACGTGGCACGGTTGATTGTAAATGGACCGGAATTGTTGGAGCTTGAATTGAAGACGGGGATGGTCAATGTGATGAAGCTGTTGAAACACTTTGGAATGAGTTCCAATGGGGTTGATATTGTTAGGAGGGATTCGGCTCATGTGTTGGGGACAGTCAAGATGTGTAATCTGCCAAATGTGATGAGAGCTTTGGGTTTACATGAGTGGTTCTTTGAGAAGATTAAGGATGGGAATCATAGTTTGTTGGTTAGTTTTGTCGCGAACAATCCCAATGTTGTACGAGATAAAGGTTATCTAGATTTTTTGAAGACTATTCAGGTGTCAAGAACTCCAACTCACAATATGAGTAAGTTGAACTTCTTGCATGCCATTGGCTTTGGAGAAAATGCTCTGACCATGAATATTTTCTCTTATATGCACGGAACAAGTGATGAGTTACAAAGGAGATTTGATTGCCTTCTACATCTTGGTATTGAGTTTTCAAAGGTGTGTAAGATGATCACAATTCATCCCAAGATTCTTAGCCAAAACCCTGAAAGTTTGGAGCAAAAGATTAATTTCTTGTGTCAGGAAATGGGACACTCATTGGAGAATTTGGTCACTTTTCCATCATTCTTGTGCTTTGACTTAGAGAATCGCATTAAGCCTAGGCATAGGTTCCATTCGTGGATTATGGAAAAGGGTCTGTCTTCCAAAAGATATTCCATTGCAAGCATGGTTGCAACAAGCAACAGGAATTTTGTTGCCCGTGCTTTTAAAATCCACCCTGCAGCTCCAAAACATTGGTTTGAGCAATTTTATCTCTGA 1641 0.4357 MSVHRHVCNTSKLSKIPWKYKKFAIAQGQKSLTDYLHATRCIPYAFADQISKNSNTALINLITKLTSFSPPHYPHNLNKFLRYNPINEFEFFFESIGIHPSKFPSLFPQNKFFFSEDGTLLDAACVLSEFGFPWDKLGVLYVESGCVFNWGVSELKGRLCGFKKYGFCNMQVVGICLAFPFVFDGQKGVEVEALFCDLRLLFGKFGLAGCVEEKGNGVDDWVGVCRKIRLFYDLIGGKNIGEFIGGNNGVGVGVIVEHGEEELVQAIEYFCRFGAKKEDVARLIVNGPELLELELKTGMVNVMKLLKHFGMSSNGVDIVRRDSAHVLGTVKMCNLPNVMRALGLHEWFFEKIKDGNHSLLVSFVANNPNVVRDKGYLDFLKTIQVSRTPTHNMSKLNFLHAIGFGENALTMNIFSYMHGTSDELQRRFDCLLHLGIEFSKVCKMITIHPKILSQNPESLEQKINFLCQEMGHSLENLVTFPSFLCFDLENRIKPRHRFHSWIMEKGLSSKRYSIASMVATSNRNFVARAFKIHPAAPKHWFEQFYL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00586 546 SMART mt_12 474 508 IPR003690 GO:0003690|GO:0006355
Phac10g00586 546 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Phac10g00586 546 SMART mt_12 442 473 IPR003690 GO:0003690|GO:0006355
Phac10g00586 546 Gene3D Transcription termination factor 3, mitochondrial 257 544 IPR038538 -
Phac10g00586 546 FunFam Transcription termination factor MTEF18, mitochondrial 380 540 - -
Phac10g00586 546 PANTHER CGI-12 PROTEIN-RELATED 88 532 IPR003690 GO:0003690|GO:0006355
Phac10g00586 546 Pfam mTERF 421 525 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00586 Phac-Chr10 7157275 7160584 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac10g00586 mTERF 6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00586 - - gmx:100812245 879.396