Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00585 ATGGGTGAAAAAGATGATGGGTTGGGGTTGAGGTTGAGTTTGAGATGGGGAGAAAATGATGATAATAACATGAATCAACAACACCCTTTCAACATGCACAAACCTCCTCCACCTGTTCCAAACCAAAGGGCTTCTTCTTTCAATAACTTGTTCCATTTCCATGGCGCGTCTCATGTAACCAATCGGAACTCCGAGCCGCCACCGTTTTTCTTTGGAATAGATGTTAACTTGCCGCCGCCACCAACACCAACACCTTCGGTGGTACCATGCGAAGAGGACAATCTTGTGTCTTCGCCGAACAGTGCAGTATCAAGCATCAGCGGGAAGAGGAGCGAAAGAGAGGAGAATGAGAGAGGGTCGTGTTCGCATGGCGGAAGTGAAGATGATGATGGCGGAGGGTTTGGTGGTGAAGGCGATGGCGACATGTCAAGGAAGAAACTGAGGTTATCGAAGGAACAGGCCTTGGTGCTGGAAGAAACATTCAAGGAACACAACACTCTGAATCCGAAACAAAAGCAAGCTTTGGCAAAGCAGTTGAATCTGAGTCCTAGACAGGTTGAGGTGTGGTTTCAAAACAGAAGAGCAAGGACCAAGCTGAAGCAGACTGAAGTGGATTGTGAATACTTAAAGAGATGTTGCGAGAATCTAACTGAGGAGAATAGGAGGCTACAGAAGGAAGTGCAAGAGCTAAGAGCATTGAAGTTTTCTCCACAGCTCTACATGCACATGAATCCTCCAACCACTCTTACTATGTGTCCTTCCTGTGAGCGTGTTGCTGTCTCATCTGCATCCTCCTCCTCATCAGCCGCCATGCCTTCTGTGCCACCTCCAGCTAATCACAACCCATTAGGCCCTACCATCCAGCGGCCAGTGCCGGTCAACCCTTGGGCAGCAATGTCAATTCAACGCCGTCCCCTGCCGTAA 924 0.4881 MGEKDDGLGLRLSLRWGENDDNNMNQQHPFNMHKPPPPVPNQRASSFNNLFHFHGASHVTNRNSEPPPFFFGIDVNLPPPPTPTPSVVPCEEDNLVSSPNSAVSSISGKRSEREENERGSCSHGGSEDDDGGGFGGEGDGDMSRKKLRLSKEQALVLEETFKEHNTLNPKQKQALAKQLNLSPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRALKFSPQLYMHMNPPTTLTMCPSCERVAVSSASSSSSAAMPSVPPPANHNPLGPTIQRPVPVNPWAAMSIQRRPLP* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00585 307 CDD bZIP 193 232 - -
Phac10g00585 307 Pfam Homeobox associated leucine zipper 200 233 IPR003106 GO:0006355|GO:0043565
Phac10g00585 307 SUPERFAMILY Homeodomain-like 129 201 IPR009057 -
Phac10g00585 307 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 9 271 - -
Phac10g00585 307 MobiDBLite consensus disorder prediction 16 46 - -
Phac10g00585 307 Coils Coil 206 233 - -
Phac10g00585 307 FunFam Homeobox-leucine zipper protein 18 133 205 - -
Phac10g00585 307 ProSiteProfiles 'Homeobox' domain profile. 140 200 IPR001356 GO:0003677
Phac10g00585 307 MobiDBLite consensus disorder prediction 91 107 - -
Phac10g00585 307 Pfam Homeodomain 144 198 IPR001356 GO:0003677
Phac10g00585 307 SMART halz 200 243 IPR003106 GO:0006355|GO:0043565
Phac10g00585 307 ProSitePatterns 'Homeobox' domain signature. 175 198 IPR017970 GO:0000981|GO:0006355
Phac10g00585 307 MobiDBLite consensus disorder prediction 108 125 - -
Phac10g00585 307 CDD homeodomain 144 201 IPR001356 GO:0003677
Phac10g00585 307 SMART HOX_1 142 204 IPR001356 GO:0003677
Phac10g00585 307 MobiDBLite consensus disorder prediction 266 289 - -
Phac10g00585 307 Gene3D - 148 198 - -
Phac10g00585 307 Pfam HD-ZIP protein N terminus 1 114 IPR006712 GO:0005634
Phac10g00585 307 MobiDBLite consensus disorder prediction 82 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00585 Phac-Chr10 7142622 7148067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00585 40 305 Homeobox Transcription Factor Family AT3G60390 59.859 1.78e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac10g00585 HD-ZIP_N 2.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00585 K09338 - gmx:100798480 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g00585 10 7142622 7148067 Phac10g00585 10 7142622 7148067 ECH