Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00580 ATGTTGCATTCTGAAAAGCCATTGAGGAGAACACTCTTCCTTTCTGTCTTGGTCTCAACTGGTTTTTTTCCAACTTTGTCTTCTTATGGGAAGACAAAGGGTAAGAATCCTTATGACGAAAATCGGTTGCTACAACAAAATCGGCGGATACAGAAAGAAAACAATGCGCCTGAGGAATTCCCAAATTTTATTAGAGAAGGTTTCAAAGTTAAAATAGTATCTTCAGAGAACTATGTAAAGAGTGACTCAGGGCTCATATACCGGGATTTTGTAGTTGGTGAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCACTTTTCACTATGTTGGTTATAATGAATCTGGTCGTCGAATCGACAGCTCTTACTTGCAGGGTACTCCTGCCAAAATCCGCATGGGTACCAAGGCATTAGTTCCAGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATCATCCCCCCTGAACTTGGACCACCAGTAGGACCTTCAACCTTTTTCAGCGCAAAACAGTTTGAAGTTTTTGATGTTGAGCTATTAAGCGTACAGAACTGTGAAAGGAGGACGGTAGCCTTTTACTCAGATGTCATTTGCAATTGA 615 0.4195 MLHSEKPLRRTLFLSVLVSTGFFPTLSSYGKTKGKNPYDENRLLQQNRRIQKENNAPEEFPNFIREGFKVKIVSSENYVKSDSGLIYRDFVVGEGDCPKDGQQVTFHYVGYNESGRRIDSSYLQGTPAKIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQNCERRTVAFYSDVICN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00580 204 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 2 204 IPR044239 -
Phac10g00580 204 Gene3D - 45 196 IPR046357 GO:0003755
Phac10g00580 204 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 101 188 IPR001179 GO:0003755
Phac10g00580 204 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 98 184 IPR001179 GO:0003755
Phac10g00580 204 SUPERFAMILY FKBP-like 47 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00580 Phac-Chr10 7133252 7137233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00580 96 190 Calmodulin-binding Proteins AT5G48570 32.353 1.25e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00580 - - var:108347486 390.193