Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00561 ATGAACTTCAACACCACTCTTCAGTCCCATGATTATGCTCTTCTTCAGTCCATTCAACATTTCCTCCTCGACGATACCCAAGACTTAAATGCTCTCACGGCGGTTTTGGCCGCACCCAACGGCGTTTCACCTCGGGAGAGCGACGGCGGATCCACGTCCACCCTTTTCACCACCGCCGTTAACTCTCCATCAGCCTCGCTGGGACAGTCAACAACGACCTCCACGGCAGCGCGTGGAGAATATACGGTGGCGCGTGGTGGCAACACGCCTTACCAGAACTTCAAGGGAGTGAGACGCAGACCTTGGGGGAAGTTTGCGGCTGAGATAAGAGATCCGAAGAGAAACGGCGCCAGAGTTTGGCTTGGAACTTACGAGTCGGCTGAGAGTGCGGCTTTGGCTTATGATCGAGCCGCTTTTGAAATGCGTGGCTCCAAAGCTAAGCTTAATTTTCCTCATTTAATTGGAAGCCATGAGCCAAGCCATGAGCCAAGCTATGAGCCAAGCTATGAGCCAAGCTATGAGCCAAGCTATGAGCCAAGCCATGAGCCAAGCTATGAGTCAAGCTAA 567 0.5273 MNFNTTLQSHDYALLQSIQHFLLDDTQDLNALTAVLAAPNGVSPRESDGGSTSTLFTTAVNSPSASLGQSTTTSTAARGEYTVARGGNTPYQNFKGVRRRPWGKFAAEIRDPKRNGARVWLGTYESAESAALAYDRAAFEMRGSKAKLNFPHLIGSHEPSHEPSYEPSYEPSYEPSYEPSHEPSYESS* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00561 188 FunFam Ethylene-responsive transcription factor 2 92 152 - -
Phac10g00561 188 SUPERFAMILY DNA-binding domain 94 152 IPR016177 GO:0003677
Phac10g00561 188 PANTHER DNA-BINDING DOMAIN 70 166 IPR044808 GO:0003700|GO:0009873
Phac10g00561 188 SMART rav1_2 93 157 IPR001471 GO:0003700|GO:0006355
Phac10g00561 188 Gene3D AP2/ERF domain 92 152 IPR036955 GO:0003700|GO:0006355
Phac10g00561 188 PRINTS Ethylene responsive element binding protein signature 133 153 IPR001471 GO:0003700|GO:0006355
Phac10g00561 188 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Phac10g00561 188 ProSiteProfiles AP2/ERF domain profile. 93 151 IPR001471 GO:0003700|GO:0006355
Phac10g00561 188 CDD AP2 92 153 IPR001471 GO:0003700|GO:0006355
Phac10g00561 188 Pfam AP2 domain 94 143 IPR001471 GO:0003700|GO:0006355
Phac10g00561 188 MobiDBLite consensus disorder prediction 151 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00561 Phac-Chr10 7028898 7029746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00561 82 172 AP2-EREBP Transcription Factor Family AT2G44840 67.708 7.92e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac10g00561 AP2 7.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00561 K09286 - gmx:100806359 199.904