Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00559 ATGGCCAATGATTTGTGTTCAGGTCAACAATCATACGAGCTTGAACATGATCCCCACATTCTTGTAAATGTTTCCGACCAAGAAACCTTTTATTCTTCCTCGTACGAGAATCCTATTGCAAACCCTAGCCATGTCCATGATGCCACTCAATTATTTGCATGCATGGTGGAAGCACCTGTGGAAGCGCGTGAGGTGCACGCGCCTCCGAAGTGGAAGCACTTCCGAGGCGTGAGGCGGCGGTCATGGGGGAAGTTTGCGGCGGAGATATGGGATCCAAAGAGAAATGGAAGGGTTTGGCTGGGAACGTATGAGACTGAAGAAGAAGCAGGTTTAGCTTATGATAGGGCTGCTTTCAAGATGAGAGGTAGCAAAGCAAAGTTGAATTTTCCACACTTGATTGGATCCCACGCGCCGCCGGAGAGAGTGATAGCGGCGGCAGTGGCTCCAAAGCCGAACCCGCCGGAGGCTTGTTTGCCTCCTTTGTCTACGGCGGAGGATGGTTCAGAGCCACAAGGGTCAAAGAAGAGGAGAAACCTAGCTGATTTGCTTAATAGGTTAGCTAAGAATAGAAGCCAAAGTATGTTAGTATGA 591 0.4941 MANDLCSGQQSYELEHDPHILVNVSDQETFYSSSYENPIANPSHVHDATQLFACMVEAPVEAREVHAPPKWKHFRGVRRRSWGKFAAEIWDPKRNGRVWLGTYETEEEAGLAYDRAAFKMRGSKAKLNFPHLIGSHAPPERVIAAAVAPKPNPPEACLPPLSTAEDGSEPQGSKKRRNLADLLNRLAKNRSQSMLV* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00559 196 PANTHER DNA-BINDING DOMAIN 50 168 IPR044808 GO:0003700|GO:0009873
Phac10g00559 196 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Phac10g00559 196 Pfam AP2 domain 73 122 IPR001471 GO:0003700|GO:0006355
Phac10g00559 196 MobiDBLite consensus disorder prediction 150 178 - -
Phac10g00559 196 FunFam Ethylene-responsive transcription factor 2 72 131 - -
Phac10g00559 196 CDD AP2 72 132 IPR001471 GO:0003700|GO:0006355
Phac10g00559 196 Gene3D AP2/ERF domain 72 131 IPR036955 GO:0003700|GO:0006355
Phac10g00559 196 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Phac10g00559 196 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
Phac10g00559 196 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Phac10g00559 196 PRINTS Ethylene responsive element binding protein signature 112 132 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00559 Phac-Chr10 7002436 7003026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00559 60 152 AP2-EREBP Transcription Factor Family AT2G44840 63.542 1.41e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac10g00559 AP2 6.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00559 K09286 - gmx:100792115 264.618