Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00526 ATGGAAGGAGAGAGAGGTGTTGTTAATCCCAGCTATGATCTTCAAGTTTCATTCACCAACACCCCACAAGCAATCCATGAAATGGGTTTTGTCCAATTTGAAGAAAATCAGGTTCTTAGCTTCTTGGCACCCTCAGCTCAATCTCAATCTTCTCAGCTCTCTCAGTCTCTAAACGGCGGCGGCGGCGGCGACACAGCCGCCGCAACAGCCGCAGTCACCACTACTATCACTGCCACCACCACCACTTCTGGATCAGTGGCAACAATTGGTTTTAACCATAATGACCTTGCATCCAGAACTTCTTGGAATAATGAACAGGTGAGAACACTGGATCCTAAAGCTGTCAATGATGAAAATTGCACCGGAAATACCAGTGATGGCAACAACACATGGTGGAGAAGTTCAGGGTCAGAGAAGAACAAGGTGAAAGTAAGGAGGAAGCTGAGAGAACCACGGTTTTGTTTCCAGACAAGAAGTGATGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTGAAGAATAGCCTTCACCCAAGAAGTTACTACCGTTGCACCCATAACAACTGTAGGGTGAAGAAAAGGGTTGAAAGACTCTCAGAAGATTGTCGAATGGTAATAACCACCTACGAAGGAAGACACAACCATTCTCCTTGTGATGACTCAAATTCATCAGAGCATGAATGTTTCACTTCTTTTTGA 717 0.4477 MEGERGVVNPSYDLQVSFTNTPQAIHEMGFVQFEENQVLSFLAPSAQSQSSQLSQSLNGGGGGDTAAATAAVTTTITATTTTSGSVATIGFNHNDLASRTSWNNEQVRTLDPKAVNDENCTGNTSDGNNTWWRSSGSEKNKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00526 238 ProSiteProfiles WRKY domain profile. 159 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac10g00526 238 FunFam WRKY transcription factor 57 150 224 - -
Phac10g00526 238 Pfam WRKY DNA -binding domain 165 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac10g00526 238 Gene3D WRKY domain 151 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac10g00526 238 SUPERFAMILY WRKY DNA-binding domain 156 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac10g00526 238 MobiDBLite consensus disorder prediction 114 135 - -
Phac10g00526 238 SMART WRKY_cls 164 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac10g00526 238 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 225 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00526 Phac-Chr10 6478125 6486491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00526 1 238 WRKY Transcription Factor Family AT2G44745 54.878 5.32e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac10g00526 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00526 - - var:108347245 393.275