Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00488 ATGTCCTTCAATCAATCAAAGGTGAAAAAGAGCGACCTCGTTTACAGAAGAAACGGACGATCCTCAGGCTTTAACCAGCAAAGAGGTTCCTACGGCAAGACTGGTGGCGATGGCGGTGGAATCAATCCATTATCCACTGCCCGAAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGACAATCTAGGCTAAATCCTTCCCAGGGAAATTCAACAGATTCAAATAAGGCATCTGCAGCCCGGATCATTAGTAATGGTACCCATTTACAGTCCCAATTACATGGTGGATCAGATGGGCCAATTACAAAGTCATCTGAATCATCAACTGGACATAAGAGCACTGGAATTGTTCCAAAAGCTGCAACTGCTGCATTTCCCCCTTTGATTTCTGATCCTGTCCTTCCCACAAGCCCTGCCAAGGGAGATGATGAGTCTAAGGCATTCCCTTTTCAATTTGGATCCATCATTCCTGGCTTTATTAATGGGATGGAAATCCCTGCTCGTACAACATCAGCTCCTCCTAAATTTGATAAGCAGGAGCCTGATCAGGCTCTTGATGAATCTTACAAATCTGTGTCTTCGGTGCCAATTCCTCCTGTTCCAAAGCAGCAGAAACCGCACGGGAAAGAGGCTGGTGTCAATGAGCAATCTAATGTTGAGGAGACTAAGGCAAACAAGGATTCTCAGTTTGGAGGTGCTAGTCCACAGATTCAATCTCAGGGCATGACAACAACGTCCCACCAAATGCCTGTACCGATGCCTTTACCAATTGGTAATGCTACGCAAGTGCAACAACCAGTTTTTATTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAAGGCCAAAACATTAGTTTTTCTCCTCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTCGTCAATATCCACAACAGCAAGGAGGAAAATTTGCTACTCCTCGAAAAACTACCCATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTCATAAAAGGATGGATGCATATTCAAATGGTGGGTCATCCGGTGCTAGGTCACATCCTAACATACCTTCTCAATCCCAACCTGTTAAATCTTTTCCGACCAATCATCCTATGAACTATTTTTCATCTAACTCATATAATACCAAGTCTCCCTATTATCCACCTAATTCTCTCCCATTAACAAATACCCCTATGACTCCTAATTCTCAGCCACCAACATTTAATTTTCCTCTGTATCATGGTCCCCAAGGTGTGAGTTTTATGAATTCATCGTCACAAGGTTCCCCTCCTAATAAAACTAGCATTCCTGCTGGGATTACATCTATGACCATTAAGCCTAATGGTACAACTACTATAGTGGACTTATCATCGTCCAATTCCTGTATTGCTGATGTTCAAAATGGAGAACCCCCTAGTTCAACAATATCCTGTGATGTTAGCTCCTCTGTGCTACAAAAAGGGTCGGAAACCTTGTCAGAAGTTTCTCCACAACAGTTTTCTAGAGATTTTGTCACAGTTGTGTCTAATAATGAAGGTGGACAGGAATCTCTCAGTATCTCCAACTCTTTGAAGGACAAGAAACCAGGGAAGAAAGATCAATTATCACAAAATCAGGTTTCTGTACGGTCTCCCACAACGGACACTATGCCTTCTCGTGTTGTTGATCATGATATATCTGATATTGAAGTACCCGATGCTATAGGAACTAAAAAAAATCATTCTGCAACAATTATTAATGAAGATCTTCCAAGATCTAATACAATTTCTACTGCTGTTGAAGTGGAGACCGATGGGTCTGTAGAAGCTCCTGCTTATGTTTCAGTGGAAGGAAATGCTGCACAAACTATTGACAAAGTTCACAATCAGATGCCTGATAAGACATATGAATTAGTTGAAGGAAATGTTGGCTCATCAGATCTGCAGTCTACTGATCTTCCAAAAACAACACTAAAGCATGCTAAAAATGATTTAGAGAATGTTGATGGTGAGTCAGGTACCAAGGATAGACCAATTATAGAACCAAATAAGGTGAAAAATACATCTAAAGGGAAGAAGAAGAGAAAAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCCGGGGAAAAGAAAGAAGATGTCTTAAGTTCTGAGAGCAAGGAAAATGCTACTACTTCTCTAAGTTTGAAGCAATTTGATGTTGGTCAGTCAGATATTAAAGCCAGTGAGAAATGTGATCATAATAAAGTTGAACTTGAAGATTGGGAGGATGTTGCCGACATGTCTACCCCTAAACTAGAGGTTCATGACATATCTCAAAAAGCAGGTGATGGACATGGAAGTACAACCAAAAAATATTCACGTGATTTCCTTCTGAAATTTGTAGAGCAGTTCGTTGATCTTCCTGAAGATTTTGAAATCACTGCAGACATTGGAGCTTTGATGAATGCCAATATTGGCGGCTCTCATATTTTTGAGCGTGATTCACATCCTAGTCCTGGAAGAGTTGTAGATAGACTAGGTGGGATGTCTCGGATGGATCGTCGTGGCGATGTGGTTGTGGAGGATGATAGATGGAACAAAGTTTCTGGTTCTTTTCGTGGACGTGGTCTGGAAGGCGTTGGTGGTAATTCAGGATTTCGATTTGGTCATGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCACAAGCACCGCTACAATATGGTGGAGGGATCCTTTCTGGGCCAATGCAATCTGGGGGAAATCAGGGTGGAAGAAATAGCCCTAACAGGGAGAGATGGCAGCGATCTGCTAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCCGCCCAAACTCCTTTACAAATAATGCACAAAGCTGAGAATAAGTATGAAGTTGGTAAAGTGACAGATGTGGAAGAGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACACCGCAAAATTTTGACAAACTCTTTGAAAAGGTGAAAGAAGTTAGTATTGACAATGCAATCACCCTCATTGGTGTCATCTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAAATAACTTTTAAAAGGTTATTATTAAACAAGTGTCAAGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTACTGAGGAAAGGGAAGATAGAAGAGTTAAGGCAAGAAGACGCATGTTGGGAAACATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAGGATCCAGATGAAGAAAACATTGAAGCTTTATGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAATCAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATTCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCCAAAAAGATTGAGGAGGTACATAGGGATGCTGCTCAGGAAAGGCAATCCCAAGCTGGTGGTAGGTCAAGTCGTGGTCCTGCTAACAATCAATCGACAAGAAGGACTCCCATTGATTTTAGTCCAAGAGTATCATCTATCTTGTCATCTTCTAATTCTCAAATGGGTGGATTATGCGGTCTTCCACCTCAATCTCGTGGGTATGGTGGCTCTCAGGATGCTCAATTTGAGGAACAACAATCTTATGAAACTAAGACCTTGTCAGTTCCTTTGCCTCAAAGATCTTTAGGAGAAGATTCTATAACCTTGGTACCTCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACCACAAATTCCAATTTGCCAATATCTGAAGTGGTTCCTGTACCTAGAGACTCTCATAGAATGACTACAGGTCTTAATGGTCAGAGTAATTCATCAGAGCGCACACAATATAACTCAAGGGAGGATATTGGGTCAAGACATGGTACTAACAAGTCTTCAGGTCCATCTACTCATGATCAATCAATTGCTCCAGAGCATAATGTAAACCATGGTAACAGAAACTTGAGGAGTGTTTCACCTGCTCCTCAATTGCAAGGGTCAATAATCTCTCAAAATGCTTATTCAGATAACATTTTGTCGGAAGAAAAACTGAGGGACATGTCCTTGTCAGCCATAAGAGAATACTACAGTGCTAGAGATGAGAATGAAATTGCTTTGTGTATCAAAGATTTGAACTCCCCAAGCTTCTATGCTTCTATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAAGACACAGAAAGAGATCTTTTGGCCAAACTACTTATCAACCTTGTGAAATCTCAACATCATACATTGAGTCAAGTCCAACTCATCAAAGGGTTTGAATCTGTTCTCTGTACATTGGAGGATGTCGTTAATGATGCCCCTAGAGCACCAGAGTTTCTTGGCCGAATTTTTGCTCAAGTCATAATAGAGAGAGTGGCTACTTTGAATGAGATTGCACAATTAATACATGATGGTGGAGAAGAGCCAGGTAGTCTCTTAGAAATTGGACTTGCAGGTGATGTTCTTGGAAGCACGTTGGAGGTAATTCAAAATGAAAAGGGAGACATGGTTCTAAATGAGATCCTTTCAAAAAGCTCTAATTTCCAATTGAAAACTTTCCAACCACCTGATGCTAAAATATCAAGGAAGTTGGAAAAATTTATTTAG 4866 0.4065 MSFNQSKVKKSDLVYRRNGRSSGFNQQRGSYGKTGGDGGGINPLSTARSFNKKSNNAQGGQSRLNPSQGNSTDSNKASAARIISNGTHLQSQLHGGSDGPITKSSESSTGHKSTGIVPKAATAAFPPLISDPVLPTSPAKGDDESKAFPFQFGSIIPGFINGMEIPARTTSAPPKFDKQEPDQALDESYKSVSSVPIPPVPKQQKPHGKEAGVNEQSNVEETKANKDSQFGGASPQIQSQGMTTTSHQMPVPMPLPIGNATQVQQPVFIPGLQPHPMHPQGIMHQGQNISFSPQMGNQLGNMGIGIGRQYPQQQGGKFATPRKTTHVKITHPETHEELRLHKRMDAYSNGGSSGARSHPNIPSQSQPVKSFPTNHPMNYFSSNSYNTKSPYYPPNSLPLTNTPMTPNSQPPTFNFPLYHGPQGVSFMNSSSQGSPPNKTSIPAGITSMTIKPNGTTTIVDLSSSNSCIADVQNGEPPSSTISCDVSSSVLQKGSETLSEVSPQQFSRDFVTVVSNNEGGQESLSISNSLKDKKPGKKDQLSQNQVSVRSPTTDTMPSRVVDHDISDIEVPDAIGTKKNHSATIINEDLPRSNTISTAVEVETDGSVEAPAYVSVEGNAAQTIDKVHNQMPDKTYELVEGNVGSSDLQSTDLPKTTLKHAKNDLENVDGESGTKDRPIIEPNKVKNTSKGKKKRKEILQKADAAGSTSDLYNAYKGPGEKKEDVLSSESKENATTSLSLKQFDVGQSDIKASEKCDHNKVELEDWEDVADMSTPKLEVHDISQKAGDGHGSTTKKYSRDFLLKFVEQFVDLPEDFEITADIGALMNANIGGSHIFERDSHPSPGRVVDRLGGMSRMDRRGDVVVEDDRWNKVSGSFRGRGLEGVGGNSGFRFGHGGNFGVLRNPRAQAPLQYGGGILSGPMQSGGNQGGRNSPNRERWQRSANFQQRGLIPSPAQTPLQIMHKAENKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDKLFEKVKEVSIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSTEEREDRRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSINMNLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSQAGGRSSRGPANNQSTRRTPIDFSPRVSSILSSSNSQMGGLCGLPPQSRGYGGSQDAQFEEQQSYETKTLSVPLPQRSLGEDSITLVPQGGLARGMSMRGSTTNSNLPISEVVPVPRDSHRMTTGLNGQSNSSERTQYNSREDIGSRHGTNKSSGPSTHDQSIAPEHNVNHGNRNLRSVSPAPQLQGSIISQNAYSDNILSEEKLRDMSLSAIREYYSARDENEIALCIKDLNSPSFYASMVSLWVTDSFERKDTERDLLAKLLINLVKSQHHTLSQVQLIKGFESVLCTLEDVVNDAPRAPEFLGRIFAQVIIERVATLNEIAQLIHDGGEEPGSLLEIGLAGDVLGSTLEVIQNEKGDMVLNEILSKSSNFQLKTFQPPDAKISRKLEKFI* 1622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00488 1621 Pfam MA3 domain 1438 1544 IPR003891 -
Phac10g00488 1621 Coils Coil 1062 1082 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 518 555 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 346 371 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 1072 1098 - -
Phac10g00488 1621 SUPERFAMILY ARM repeat 976 1204 IPR016024 -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 919 934 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 1202 1226 - -
Phac10g00488 1621 Pfam MIF4G domain 980 1202 IPR003890 GO:0003723|GO:0005515
Phac10g00488 1621 MobiDBLite consensus disorder prediction 127 148 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 658 685 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 1350 1367 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 1227 1270 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 223 247 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 44 114 - -
Phac10g00488 1621 SMART if4_15 980 1202 IPR003890 GO:0003723|GO:0005515
Phac10g00488 1621 MobiDBLite consensus disorder prediction 165 247 - -
Phac10g00488 1621 Gene3D - 980 1215 - -
Phac10g00488 1621 Gene3D - 1424 1621 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 18 32 - -
Phac10g00488 1621 FunFam Eukaryotic translation initiation factor 4G 1426 1620 - -
Phac10g00488 1621 SMART ma3_7 1433 1547 IPR003891 -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 539 555 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 910 934 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 1202 1296 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 1279 1296 - -
Phac10g00488 1621 SUPERFAMILY ARM repeat 1428 1619 IPR016024 -
Phac10g00488 1621 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 289 1620 IPR045208 GO:0003743
Phac10g00488 1621 MobiDBLite consensus disorder prediction 1377 1410 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 658 731 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 1 114 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 1325 1410 - -
Phac10g00488 1621 MobiDBLite consensus disorder prediction 350 371 - -
Phac10g00488 1621 FunFam Eukaryotic translation initiation factor 4G 980 1215 - -
Phac10g00488 1621 ProSiteProfiles MI domain profile. 1432 1556 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00488 Phac-Chr10 6135263 6146350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00488 1 1620 Eukaryotic Initiation Factors Gene Family AT3G60240 44.835 0.0 1202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00488 K03260 - gmx:100798562 2335.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g00488 10 6135263 6146350 Phac10g00488 10 6135263 6146350 ECH