Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00487 ATGTCCTTCAATCAATCAAAGGTGAAAAAGAGCGACCTCGTTTACAGAAGAAACGGACGATCCTCAGGCTTTAACCAGCAAAGAGGTTCCTACGGCAAGACTGGTGGCGATGGCGGTGGAATCAATCCATTATCCACTGCCCGAAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGACAATCTAGGCTAAATCCTTCCCAGGGAAATTCAACAGATTCAAATAAGGCATCTGCAGCCCGGATCATTAGTAATGGTACCCATTTACAGTCCCAATTACATGGTGGATCAGATGGGCCAATTACAAAGTCATCTGAATCATCAACTGGACATAAGAGCACTGGAATTGTTCCAAAAGCTGCAACTGCTGCATTTCCCCCTTTGATTTCTGATCCTGTCCTTCCCACAAGCCCTGCCAAGGGAGATGATGAGTCTAAGGCATTCCCTTTTCAATTTGGATCCATCATTCCTGGCTTTATTAATGGGATGGAAATCCCTGCTCGTACAACATCAGCTCCTCCTAAATTTGATAAGCAGGAGCCTGATCAGGCTCTTGATGAATCTTACAAATCTGTGTCTTCGGTGCCAATTCCTCCTGTTCCAAAGCAGCAGAAACCGCACGGGAAAGAGGCTGGTGTCAATGAGCAATCTAATGTTGAGGAGACTAAGGCAAACAAGGATTCTCAGGCTCCTTTACAGTTTGGAGGTGCTAGTCCACAGATTCAATCTCAGGGCATGACAACAACGTCCCACCAAATGCCTGTACCGATGCCTTTACCAATTGGTAATGCTACGCAAGTGCAACAACCAGTTTTTATTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAAGGCCAAAACATTAGTTTTTCTCCTCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTCGTCAATATCCACAACAGCAAGGAGGAAAATTTGCTACTCCTCGAAAAACTACCCATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTCATAAAAGGATGGATGCATATTCAAATGGTGGGTCATCCGGTGCTAGGTCACATCCTAACATACCTTCTCAATCCCAACCTGTTAAATCTTTTCCGACCAATCATCCTATGAACTATTTTTCATCTAACTCATATAATACCAAGTCTCCCTATTATCCACCTAATTCTCTCCCATTAACAAATACCCCTATGACTCCTAATTCTCAGCCACCAACATTTAATTTTCCTCTGTATCATGGTCCCCAAGGTGTGAGTTTTATGAATTCATCGTCACAAGGTTCCCCTCCTAATAAAACTAGCATTCCTGCTGGGATTACATCTATGACCATTAAGCCTAATGGTACAACTACTATAGTGGACTTATCATCGTCCAATTCCTGTATTGCTGATGTTCAAAATGGAGAACCCCCTAGTTCAACAATATCCTGTGATGTTAGCTCCTCTGTGCTACAAAAAGGGTCGGAAACCTTGTCAGAAGTTTCTCCACAACAGTTTTCTAGAGATTTTGTCACAGTTGTGTCTAATAATGAAGGTGGACAGGAATCTCTCAGTATCTCCAACTCTTTGAAGGACAAGAAACCAGGGAAGAAAGATCAATTATCACAAAATCAGGTTTCTGTACGGTCTCCCACAACGGACACTATGCCTTCTCGTGTTGTTGATCATGATATATCTGATATTGAAGTACCCGATGCTATAGGAACTAAAAAAAATCATTCTGCAACAATTATTAATGAAGATCTTCCAAGATCTAATACAATTTCTACTGCTGTTGAAGTGGAGACCGATGGGTCTGTAGAAGCTCCTGCTTATGTTTCAGTGGAAGGAAATGCTGCACAAACTATTGACAAAGTTCACAATCAGATGCCTGATAAGACATATGAATTAGTTGAAGGAAATGTTGGCTCATCAGATCTGCAGTCTACTGATCTTCCAAAAACAACACTAAAGCATGCTAAAAATGATTTAGAGAATGTTGATGGTGAGTCAGGTACCAAGGATAGACCAATTATAGAACCAAATAAGGTGAAAAATACATCTAAAGGGAAGAAGAAGAGAAAAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCCGGGGAAAAGAAAGAAGATGTCTTAAGTTCTGAGAGCAAGGAAAATGCTACTACTTCTCTAAGTTTGAAGCAATTTGATGTTGGTCAGTCAGATATTAAAGCCAGTGAGAAATGTGATCATAATAAAGTTGAACTTGAAGATTGGGAGGATGTTGCCGACATGTCTACCCCTAAACTAGAGGTTCATGACATATCTCAAAAAGCAGGTGATGGACATGGAAGTACAACCAAAAAATATTCACGTGATTTCCTTCTGAAATTTGTAGAGCAGTTCGTTGATCTTCCTGAAGATTTTGAAATCACTGCAGACATTGGAGCTTTGATGAATGCCAATATTGGCGGCTCTCATATTTTTGAGCGTGATTCACATCCTAGTCCTGGAAGAGTTGTAGATAGACTAGGTGGGATGTCTCGGATGGATCGTCGTGGCGATGTGGTTGTGGAGGATGATAGATGGAACAAAGTTTCTGGTTCTTTTCGTGGACGTGGTCTGGAAGGCGTTGGTGGTAATTCAGGATTTCGATTTGGTCATGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCACAAGCACCGCTACAATATGGTGGAGGGATCCTTTCTGGGCCAATGCAATCTGGGGGAAATCAGGGTGGAAGAAATAGCCCTAACAGGGAGAGATGGCAGCGATCTGCTAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCCGCCCAAACTCCTTTACAAATAATGCACAAAGCTGAGAATAAGTATGAAGTTGGTAAAGTGACAGATGTGGAAGAGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACACCGCAAAATTTTGACAAACTCTTTGAAAAGGTGAAAGAAGTTAGTATTGACAATGCAATCACCCTCATTGGTGTCATCTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAAATAACTTTTAAAAGGTTATTATTAAACAAGTGTCAAGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTACTGAGGAAAGGGAAGATAGAAGAGTTAAGGCAAGAAGACGCATGTTGGGAAACATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAGGATCCAGATGAAGAAAACATTGAAGCTTTATGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAATCAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATTCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCCAAAAAGATTGAGGAGGTACATAGGGATGCTGCTCAGGAAAGGCAATCCCAAGCTGGTGGTAGGTCAAGTCGTGGTCCTGCTAACAATCAATCGACAAGAAGGACTCCCATTGATTTTAGTCCAAGAGTATCATCTATCTTGTCATCTTCTAATTCTCAAATGGGTGGATTATGCGGTCTTCCACCTCAATCTCGTGGGTATGGTGGCTCTCAGGATGCTCAATTTGAGGAACAACAATCTTATGAAACTAAGACCTTGTCAGTTCCTTTGCCTCAAAGATCTTTAGGAGAAGATTCTATAACCTTGGTACCTCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACCACAAATTCCAATTTGCCAATATCTGAAGTGGTTCCTGTACCTAGAGACTCTCATAGAATGACTACAGGTCTTAATGGTCAGAGTAATTCATCAGAGCGCACACAATATAACTCAAGGGAGGATATTGGGTCAAGACATGGTACTAACAAGTCTTCAGGTCCATCTACTCATGATCAATCAATTGCTCCAGAGCATAATGTAAACCATGGTAACAGAAACTTGAGGAGTGTTTCACCTGCTCCTCAATTGCAAGGGTCAATAATCTCTCAAAATGCTTATTCAGATAACATTTTGTCGGAAGAAAAACTGAGGGACATGTCCTTGTCAGCCATAAGAGAATACTACAGTGCTAGAGATGAGAATGAAATTGCTTTGTGTATCAAAGATTTGAACTCCCCAAGCTTCTATGCTTCTATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAAGACACAGAAAGAGATCTTTTGGCCAAACTACTTATCAACCTTGTGAAATCTCAACATCATACATTGAGTCAAGTCCAACTCATCAAAGGGTTTGAATCTGTTCTCTGTACATTGGAGGATGTCGTTAATGATGCCCCTAGAGCACCAGAGTTTCTTGGCCGAATTTTTGCTCAAGTCATAATAGAGAGAGTGGCTACTTTGAATGAGATTGCACAATTAATACATGATGGTGGAGAAGAGCCAGGTAGTCTCTTAGAAATTGGACTTGCAGGTGATGTTCTTGGAAGCACGTTGGAGGTAATTCAAAATGAAAAGGGAGACATGGTTCTAAATGAGATCCTTTCAAAAAGCTCTAATTTCCAATTGAAAACTTTCCAACCACCTGATGCTAAAATATCAAGGAAGTTGGAAAAATTTATTTAG 4878 0.4067 MSFNQSKVKKSDLVYRRNGRSSGFNQQRGSYGKTGGDGGGINPLSTARSFNKKSNNAQGGQSRLNPSQGNSTDSNKASAARIISNGTHLQSQLHGGSDGPITKSSESSTGHKSTGIVPKAATAAFPPLISDPVLPTSPAKGDDESKAFPFQFGSIIPGFINGMEIPARTTSAPPKFDKQEPDQALDESYKSVSSVPIPPVPKQQKPHGKEAGVNEQSNVEETKANKDSQAPLQFGGASPQIQSQGMTTTSHQMPVPMPLPIGNATQVQQPVFIPGLQPHPMHPQGIMHQGQNISFSPQMGNQLGNMGIGIGRQYPQQQGGKFATPRKTTHVKITHPETHEELRLHKRMDAYSNGGSSGARSHPNIPSQSQPVKSFPTNHPMNYFSSNSYNTKSPYYPPNSLPLTNTPMTPNSQPPTFNFPLYHGPQGVSFMNSSSQGSPPNKTSIPAGITSMTIKPNGTTTIVDLSSSNSCIADVQNGEPPSSTISCDVSSSVLQKGSETLSEVSPQQFSRDFVTVVSNNEGGQESLSISNSLKDKKPGKKDQLSQNQVSVRSPTTDTMPSRVVDHDISDIEVPDAIGTKKNHSATIINEDLPRSNTISTAVEVETDGSVEAPAYVSVEGNAAQTIDKVHNQMPDKTYELVEGNVGSSDLQSTDLPKTTLKHAKNDLENVDGESGTKDRPIIEPNKVKNTSKGKKKRKEILQKADAAGSTSDLYNAYKGPGEKKEDVLSSESKENATTSLSLKQFDVGQSDIKASEKCDHNKVELEDWEDVADMSTPKLEVHDISQKAGDGHGSTTKKYSRDFLLKFVEQFVDLPEDFEITADIGALMNANIGGSHIFERDSHPSPGRVVDRLGGMSRMDRRGDVVVEDDRWNKVSGSFRGRGLEGVGGNSGFRFGHGGNFGVLRNPRAQAPLQYGGGILSGPMQSGGNQGGRNSPNRERWQRSANFQQRGLIPSPAQTPLQIMHKAENKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDKLFEKVKEVSIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSTEEREDRRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSINMNLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSQAGGRSSRGPANNQSTRRTPIDFSPRVSSILSSSNSQMGGLCGLPPQSRGYGGSQDAQFEEQQSYETKTLSVPLPQRSLGEDSITLVPQGGLARGMSMRGSTTNSNLPISEVVPVPRDSHRMTTGLNGQSNSSERTQYNSREDIGSRHGTNKSSGPSTHDQSIAPEHNVNHGNRNLRSVSPAPQLQGSIISQNAYSDNILSEEKLRDMSLSAIREYYSARDENEIALCIKDLNSPSFYASMVSLWVTDSFERKDTERDLLAKLLINLVKSQHHTLSQVQLIKGFESVLCTLEDVVNDAPRAPEFLGRIFAQVIIERVATLNEIAQLIHDGGEEPGSLLEIGLAGDVLGSTLEVIQNEKGDMVLNEILSKSSNFQLKTFQPPDAKISRKLEKFI* 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00487 1625 Gene3D - 1428 1625 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 1231 1274 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 663 689 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 914 938 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 543 559 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 1206 1300 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 1283 1300 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 1381 1414 - -
Phac10g00487 1625 SMART ma3_7 1437 1551 IPR003891 -
Phac10g00487 1625 FunFam Eukaryotic translation initiation factor 4G 984 1219 - -
Phac10g00487 1625 Pfam MIF4G domain 984 1206 IPR003890 GO:0003723|GO:0005515
Phac10g00487 1625 MobiDBLite consensus disorder prediction 1329 1414 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 354 375 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 127 148 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 663 735 - -
Phac10g00487 1625 Coils Coil 1066 1086 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 44 114 - -
Phac10g00487 1625 ProSiteProfiles MI domain profile. 1436 1560 IPR003891 -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 522 559 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 350 375 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 18 32 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 1076 1102 - -
Phac10g00487 1625 Gene3D - 984 1219 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 923 938 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 1206 1230 - -
Phac10g00487 1625 FunFam Eukaryotic translation initiation factor 4G 1430 1624 - -
Phac10g00487 1625 SMART if4_15 984 1206 IPR003890 GO:0003723|GO:0005515
Phac10g00487 1625 SUPERFAMILY ARM repeat 1432 1623 IPR016024 -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 165 251 - -
Phac10g00487 1625 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 293 1624 IPR045208 GO:0003743
Phac10g00487 1625 MobiDBLite consensus disorder prediction 223 251 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 1 114 - -
Phac10g00487 1625 MobiDBLite consensus disorder prediction 1354 1371 - -
Phac10g00487 1625 SUPERFAMILY ARM repeat 980 1208 IPR016024 -
Phac10g00487 1625 Pfam MA3 domain 1442 1548 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00487 Phac-Chr10 6135263 6146350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00487 1 1624 Eukaryotic Initiation Factors Gene Family AT3G60240 44.978 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00487 K03260 - gmx:100798562 2346.24