Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00486 ATGGCGGTGGAATCAATCCATTATCCACTGCCCGAAGGTGGACAATCTAGGCTAAATCCTTCCCAGGGAAATTCAACAGATTCAAATAAGGCATCTGCAGCCCGGATCATTAGTAATGGTACCCATTTACAGTCCCAATTACATGGTGGATCAGATGGGCCAATTACAAAGTCATCTGAATCATCAACTGGACATAAGAGCACTGGAATTGTTCCAAAAGCTGCAACTGCTGCATTTCCCCCTTTGATTTCTGATCCTGTCCTTCCCACAAGCCCTGCCAAGGGAGATGATGAGTCTAAGGCATTCCCTTTTCAATTTGGATCCATCATTCCTGGCTTTATTAATGGGATGGAAATCCCTGCTCGTACAACATCAGCTCCTCCTAAATTTGATAAGCAGGAGCCTGATCAGGCTCTTGATGAATCTTACAAATCTGTGTCTTCGGTGCCAATTCCTCCTGTTCCAAAGCAGCAGAAACCGCACGGGAAAGAGGCTGGTGTCAATGAGCAATCTAATGTTGAGGAGACTAAGGCAAACAAGGATTCTCAGGTGTCAATTTTAACCTCAGTAAATCAGATATCAAAACCCTTTGTTGCTCCTGTAACTGGGATTTCAATGTCAACTTCATATCACCAATCACAGGCTCCTTTACAGTTTGGAGGTGCTAGTCCACAGATTCAATCTCAGGGCATGACAACAACGTCCCACCAAATGCCTGTACCGATGCCTTTACCAATTGGTAATGCTACGCAAGTGCAACAACCAGTTTTTATTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAAGGCCAAAACATTAGTTTTTCTCCTCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTCGTCAATATCCACAACAGCAAGGAGGAAAATTTGCTACTCCTCGAAAAACTACCCATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTCATAAAAGGATGGATGCATATTCAAATGGTGGGTCATCCGGTGCTAGGTCACATCCTAACATACCTTCTCAATCCCAACCTGTTAAATCTTTTCCGACCAATCATCCTATGAACTATTTTTCATCTAACTCATATAATACCAAGTCTCCCTATTATCCACCTAATTCTCTCCCATTAACAAATACCCCTATGACTCCTAATTCTCAGCCACCAACATTTAATTTTCCTCTGTATCATGGTCCCCAAGGTGTGAGTTTTATGAATTCATCGTCACAAGGTTCCCCTCCTAATAAAACTAGCATTCCTGCTGGGATTACATCTATGACCATTAAGCCTAATGGTACAACTACTATAGTGGACTTATCATCGTCCAATTCCTGTATTGCTGATGTTCAAAATGGAGAACCCCCTAGTTCAACAATATCCTGTGATGTTAGCTCCTCTGTGCTACAAAAAGGGTCGGAAACCTTGTCAGAAGTTTCTCCACAACAGTTTTCTAGAGATTTTGTCACAGTTGTGTCTAATAATGAAGGTGGACAGGAATCTCTCAGTATCTCCAACTCTTTGAAGGACAAGAAACCAGGGAAGAAAGATCAATTATCACAAAATCAGGTTTCTGTACGGTCTCCCACAACGGACACTATGCCTTCTCGTGTTGTTGATCATGATATATCTGATATTGAAGTACCCGATGCTATAGGAACTAAAAAAAATCATTCTGCAACAATTATTAATGAAGATCTTCCAAGATCTAATACAATTTCTACTGCTGTTGAAGTGGAGACCGATGGGTCTGTAGAAGCTCCTGCTTATGTTTCAGTGGAAGGAAATGCTGCACAAACTATTGACAAAGTTCACAATCAGATGCCTGATAAGACATATGAATTAGTTGAAGGAAATGTTGGCTCATCAGATCTGCAGTCTACTGATCTTCCAAAAACAACACTAAAGCATGCTAAAAATGATTTAGAGAATGTTGATGGTGAGTCAGGTACCAAGGATAGACCAATTATAGAACCAAATAAGGTGAAAAATACATCTAAAGGGAAGAAGAAGAGAAAAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCCGGGGAAAAGAAAGAAGATGTCTTAAGTTCTGAGAGCAAGGAAAATGCTACTACTTCTCTAAGTTTGAAGCAATTTGATGTTGGTCAGTCAGATATTAAAGCCAGTGAGAAATGTGATCATAATAAAGTTGAACTTGAAGATTGGGAGGATGTTGCCGACATGTCTACCCCTAAACTAGAGGTTCATGACATATCTCAAAAAGCAGGTGATGGACATGGAAGTACAACCAAAAAATATTCACGTGATTTCCTTCTGAAATTTGTAGAGCAGTTCGTTGATCTTCCTGAAGATTTTGAAATCACTGCAGACATTGGAGCTTTGATGAATGCCAATATTGGCGGCTCTCATATTTTTGAGCGTGATTCACATCCTAGTCCTGGAAGAGTTGTAGATAGACTAGGTGGGATGTCTCGGATGGATCGTCGTGGCGATGTGGTTGTGGAGGATGATAGATGGAACAAAGTTTCTGGTTCTTTTCGTGGACGTGGTCTGGAAGGCGTTGGTGGTAATTCAGGATTTCGATTTGGTCATGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCACAAGCACCGCTACAATATGGTGGAGGGATCCTTTCTGGGCCAATGCAATCTGGGGGAAATCAGGGTGGAAGAAATAGCCCTAACAGGGAGAGATGGCAGCGATCTGCTAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCCGCCCAAACTCCTTTACAAATAATGCACAAAGCTGAGAATAAGTATGAAGTTGGTAAAGTGACAGATGTGGAAGAGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACACCGCAAAATTTTGACAAACTCTTTGAAAAGGTGAAAGAAGTTAGTATTGACAATGCAATCACCCTCATTGGTGTCATCTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAAATAACTTTTAAAAGGTTATTATTAAACAAGTGTCAAGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTACTGAGGAAAGGGAAGATAGAAGAGTTAAGGCAAGAAGACGCATGTTGGGAAACATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAGGATCCAGATGAAGAAAACATTGAAGCTTTATGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAATCAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATTCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCCAAAAAGATTGAGGAGGTACATAGGGATGCTGCTCAGGAAAGGCAATCCCAAGCTGGTGGTAGGTCAAGTCGTGGTCCTGCTAACAATCAATCGACAAGAAGGACTCCCATTGATTTTAGTCCAAGAGTATCATCTATCTTGTCATCTTCTAATTCTCAAATGGGTGGATTATGCGGTCTTCCACCTCAATCTCGTGGGTATGGTGGCTCTCAGGATGCTCAATTTGAGGAACAACAATCTTATGAAACTAAGACCTTGTCAGTTCCTTTGCCTCAAAGATCTTTAGGAGAAGATTCTATAACCTTGGTACCTCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACCACAAATTCCAATTTGCCAATATCTGAAGTGGTTCCTGTACCTAGAGACTCTCATAGAATGACTACAGGTCTTAATGGTCAGAGTAATTCATCAGAGCGCACACAATATAACTCAAGGGAGGATATTGGGTCAAGACATGGTACTAACAAGTCTTCAGGTCCATCTACTCATGATCAATCAATTGCTCCAGAGCATAATGTAAACCATGGTAACAGAAACTTGAGGAGTGTTTCACCTGCTCCTCAATTGCAAGGGTCAATAATCTCTCAAAATGCTTATTCAGATAACATTTTGTCGGAAGAAAAACTGAGGGACATGTCCTTGTCAGCCATAAGAGAATACTACAGTGCTAGAGATGAGAATGAAATTGCTTTGTGTATCAAAGATTTGAACTCCCCAAGCTTCTATGCTTCTATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAAGACACAGAAAGAGATCTTTTGGCCAAACTACTTATCAACCTTGTGAAATCTCAACATCATACATTGAGTCAAGTCCAACTCATCAAAGGGTTTGAATCTGTTCTCTGTACATTGGAGGATGTCGTTAATGATGCCCCTAGAGCACCAGAGTTTCTTGGCCGAATTTTTGCTCAAGTCATAATAGAGAGAGTGGCTACTTTGAATGAGATTGCACAATTAATACATGATGGTGGAGAAGAGCCAGGTAGTCTCTTAGAAATTGGACTTGCAGGTGATGTTCTTGGAAGCACGTTGGAGGTAATTCAAAATGAAAAGGGAGACATGGTTCTAAATGAGATCCTTTCAAAAAGCTCTAATTTCCAATTGAAAACTTTCCAACCACCTGATGCTAAAATATCAAGGAAGTTGGAAAAATTTATTTAG 4833 0.4051 MAVESIHYPLPEGGQSRLNPSQGNSTDSNKASAARIISNGTHLQSQLHGGSDGPITKSSESSTGHKSTGIVPKAATAAFPPLISDPVLPTSPAKGDDESKAFPFQFGSIIPGFINGMEIPARTTSAPPKFDKQEPDQALDESYKSVSSVPIPPVPKQQKPHGKEAGVNEQSNVEETKANKDSQVSILTSVNQISKPFVAPVTGISMSTSYHQSQAPLQFGGASPQIQSQGMTTTSHQMPVPMPLPIGNATQVQQPVFIPGLQPHPMHPQGIMHQGQNISFSPQMGNQLGNMGIGIGRQYPQQQGGKFATPRKTTHVKITHPETHEELRLHKRMDAYSNGGSSGARSHPNIPSQSQPVKSFPTNHPMNYFSSNSYNTKSPYYPPNSLPLTNTPMTPNSQPPTFNFPLYHGPQGVSFMNSSSQGSPPNKTSIPAGITSMTIKPNGTTTIVDLSSSNSCIADVQNGEPPSSTISCDVSSSVLQKGSETLSEVSPQQFSRDFVTVVSNNEGGQESLSISNSLKDKKPGKKDQLSQNQVSVRSPTTDTMPSRVVDHDISDIEVPDAIGTKKNHSATIINEDLPRSNTISTAVEVETDGSVEAPAYVSVEGNAAQTIDKVHNQMPDKTYELVEGNVGSSDLQSTDLPKTTLKHAKNDLENVDGESGTKDRPIIEPNKVKNTSKGKKKRKEILQKADAAGSTSDLYNAYKGPGEKKEDVLSSESKENATTSLSLKQFDVGQSDIKASEKCDHNKVELEDWEDVADMSTPKLEVHDISQKAGDGHGSTTKKYSRDFLLKFVEQFVDLPEDFEITADIGALMNANIGGSHIFERDSHPSPGRVVDRLGGMSRMDRRGDVVVEDDRWNKVSGSFRGRGLEGVGGNSGFRFGHGGNFGVLRNPRAQAPLQYGGGILSGPMQSGGNQGGRNSPNRERWQRSANFQQRGLIPSPAQTPLQIMHKAENKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDKLFEKVKEVSIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSTEEREDRRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSINMNLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSQAGGRSSRGPANNQSTRRTPIDFSPRVSSILSSSNSQMGGLCGLPPQSRGYGGSQDAQFEEQQSYETKTLSVPLPQRSLGEDSITLVPQGGLARGMSMRGSTTNSNLPISEVVPVPRDSHRMTTGLNGQSNSSERTQYNSREDIGSRHGTNKSSGPSTHDQSIAPEHNVNHGNRNLRSVSPAPQLQGSIISQNAYSDNILSEEKLRDMSLSAIREYYSARDENEIALCIKDLNSPSFYASMVSLWVTDSFERKDTERDLLAKLLINLVKSQHHTLSQVQLIKGFESVLCTLEDVVNDAPRAPEFLGRIFAQVIIERVATLNEIAQLIHDGGEEPGSLLEIGLAGDVLGSTLEVIQNEKGDMVLNEILSKSSNFQLKTFQPPDAKISRKLEKFI* 1611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00486 1610 MobiDBLite consensus disorder prediction 335 361 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 908 923 - -
Phac10g00486 1610 FunFam Eukaryotic translation initiation factor 4G 969 1204 - -
Phac10g00486 1610 Coils Coil 1051 1071 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 1 68 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 1191 1285 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 1339 1356 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 1216 1259 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 1191 1215 - -
Phac10g00486 1610 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 278 1609 IPR045208 GO:0003743
Phac10g00486 1610 Pfam MA3 domain 1427 1533 IPR003891 -
Phac10g00486 1610 SUPERFAMILY ARM repeat 965 1193 IPR016024 -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 648 674 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 899 923 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 528 544 - -
Phac10g00486 1610 FunFam Eukaryotic translation initiation factor 4G 1415 1609 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 1268 1285 - -
Phac10g00486 1610 SMART if4_15 969 1191 IPR003890 GO:0003723|GO:0005515
Phac10g00486 1610 MobiDBLite consensus disorder prediction 1366 1399 - -
Phac10g00486 1610 ProSiteProfiles MI domain profile. 1421 1545 IPR003891 -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 1314 1399 - -
Phac10g00486 1610 Gene3D - 1413 1610 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 1061 1087 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 15 68 - -
Phac10g00486 1610 Pfam MIF4G domain 969 1191 IPR003890 GO:0003723|GO:0005515
Phac10g00486 1610 Gene3D - 969 1204 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 339 361 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 648 720 - -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 119 182 - -
Phac10g00486 1610 SUPERFAMILY ARM repeat 1417 1608 IPR016024 -
Phac10g00486 1610 SMART ma3_7 1422 1536 IPR003891 -
Phac10g00486 1610 MobiDBLite consensus disorder prediction 507 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00486 Phac-Chr10 6135263 6146350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00486 42 1609 Eukaryotic Initiation Factors Gene Family AT3G60240 46.331 0.0 1199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00486 K03260 - gmx:100798562 2324.28