Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00485 ATGTCCTTCAATCAATCAAAGGTGAAAAAGAGCGACCTCGTTTACAGAAGAAACGGACGATCCTCAGGCTTTAACCAGCAAAGAGGTTCCTACGGCAAGACTGGTGGCGATGGCGGTGGAATCAATCCATTATCCACTGCCCGAAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGACAATCTAGGCTAAATCCTTCCCAGGGAAATTCAACAGATTCAAATAAGGCATCTGCAGCCCGGATCATTAGTAATGGTACCCATTTACAGTCCCAATTACATGGTGGATCAGATGGGCCAATTACAAAGTCATCTGAATCATCAACTGGACATAAGAGCACTGGAATTGTTCCAAAAGCTGCAACTGCTGCATTTCCCCCTTTGATTTCTGATCCTGTCCTTCCCACAAGCCCTGCCAAGGGAGATGATGAGTCTAAGGCATTCCCTTTTCAATTTGGATCCATCATTCCTGGCTTTATTAATGGGATGGAAATCCCTGCTCGTACAACATCAGCTCCTCCTAAATTTGATAAGCAGGAGCCTGATCAGGCTCTTGATGAATCTTACAAATCTGTGTCTTCGGTGCCAATTCCTCCTGTTCCAAAGCAGCAGAAACCGCACGGGAAAGAGGCTGGTGTCAATGAGCAATCTAATGTTGAGGAGACTAAGGCAAACAAGGATTCTCAGGTGTCAATTTTAACCTCAGTAAATCAGATATCAAAACCCTTTGTTGCTCCTGTAACTGGGATTTCAATGTCAACTTCATATCACCAATCACAGGCTCCTTTACAGTTTGGAGGTGCTAGTCCACAGATTCAATCTCAGGGCATGACAACAACGTCCCACCAAATGCCTGTACCGATGCCTTTACCAATTGGTAATGCTACGCAAGTGCAACAACCAGTTTTTATTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAAGGCCAAAACATTAGTTTTTCTCCTCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTCGTCAATATCCACAACAGCAAGGAGGAAAATTTGCTACTCCTCGAAAAACTACCCATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTCATAAAAGGATGGATGCATATTCAAATGGTGGGTCATCCGGTGCTAGGTCACATCCTAACATACCTTCTCAATCCCAACCTGTTAAATCTTTTCCGACCAATCATCCTATGAACTATTTTTCATCTAACTCATATAATACCAAGTCTCCCTATTATCCACCTAATTCTCTCCCATTAACAAATACCCCTATGACTCCTAATTCTCAGCCACCAACATTTAATTTTCCTCTGTATCATGGTCCCCAAGGTGTGAGTTTTATGAATTCATCGTCACAAGGTTCCCCTCCTAATAAAACTAGCATTCCTGCTGGGATTACATCTATGACCATTAAGCCTAATGGTACAACTACTATAGTGGACTTATCATCGTCCAATTCCTGTATTGCTGATGTTCAAAATGGAGAACCCCCTAGTTCAACAATATCCTGTGATGTTAGCTCCTCTGTGCTACAAAAAGGGTCGGAAACCTTGTCAGAAGTTTCTCCACAACAGTTTTCTAGAGATTTTGTCACAGTTGTGTCTAATAATGAAGGTGGACAGGAATCTCTCAGTATCTCCAACTCTTTGAAGGACAAGAAACCAGGGAAGAAAGATCAATTATCACAAAATCAGGTTTCTGTACGGTCTCCCACAACGGACACTATGCCTTCTCGTGTTGTTGATCATGATATATCTGATATTGAAGTACCCGATGCTATAGGAACTAAAAAAAATCATTCTGCAACAATTATTAATGAAGATCTTCCAAGATCTAATACAATTTCTACTGCTGTTGAAGTGGAGACCGATGGGTCTGTAGAAGCTCCTGCTTATGTTTCAGTGGAAGGAAATGCTGCACAAACTATTGACAAAGTTCACAATCAGATGCCTGATAAGACATATGAATTAGTTGAAGGAAATGTTGGCTCATCAGATCTGCAGTCTACTGATCTTCCAAAAACAACACTAAAGCATGCTAAAAATGATTTAGAGAATGTTGATGGTGAGTCAGGTACCAAGGATAGACCAATTATAGAACCAAATAAGGTGAAAAATACATCTAAAGGGAAGAAGAAGAGAAAAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCCGGGGAAAAGAAAGAAGATGTCTTAAGTTCTGAGAGCAAGGAAAATGCTACTACTTCTCTAAGTTTGAAGCAATTTGATGTTGGTCAGTCAGATATTAAAGCCAGTGAGAAATGTGATCATAATAAAGTTGAACTTGAAGATTGGGAGGATGTTGCCGACATGTCTACCCCTAAACTAGAGGTTCATGACATATCTCAAAAAGCAGGTGATGGACATGGAAGTACAACCAAAAAATATTCACGTGATTTCCTTCTGAAATTTGTAGAGCAGTTCGTTGATCTTCCTGAAGATTTTGAAATCACTGCAGACATTGGAGCTTTGATGAATGCCAATATTGGCGGCTCTCATATTTTTGAGCGTGATTCACATCCTAGTCCTGGAAGAGTTGTAGATAGACTAGGTGGGATGTCTCGGATGGATCGTCGTGGCGATGTGGTTGTGGAGGATGATAGATGGAACAAAGTTTCTGGTTCTTTTCGTGGACGTGGTCTGGAAGGCGTTGGTGGTAATTCAGGATTTCGATTTGGTCATGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCACAAGCACCGCTACAATATGGTGGAGGGATCCTTTCTGGGCCAATGCAATCTGGGGGAAATCAGGGTGGAAGAAATAGCCCTAACAGGGAGAGATGGCAGCGATCTGCTAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCCGCCCAAACTCCTTTACAAATAATGCACAAAGCTGAGAATAAGTATGAAGTTGGTAAAGTGACAGATGTGGAAGAGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACACCGCAAAATTTTGACAAACTCTTTGAAAAGGTGAAAGAAGTTAGTATTGACAATGCAATCACCCTCATTGGTGTCATCTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAAATAACTTTTAAAAGGTTATTATTAAACAAGTGTCAAGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTACTGAGGAAAGGGAAGATAGAAGAGTTAAGGCAAGAAGACGCATGTTGGGAAACATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAGGATCCAGATGAAGAAAACATTGAAGCTTTATGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAATCAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATTCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCCAAAAAGATTGAGGAGGTACATAGGGATGCTGCTCAGGAAAGGCAATCCCAAGCTGGTGGTAGGTCAAGTCGTGGTCCTGCTAACAATCAATCGACAAGAAGGACTCCCATTGATTTTAGTCCAAGAGTATCATCTATCTTGTCATCTTCTAATTCTCAAATGGGTGGATTATGCGGTCTTCCACCTCAATCTCGTGGGTATGGTGGCTCTCAGGATGCTCAATTTGAGGAACAACAATCTTATGAAACTAAGACCTTGTCAGTTCCTTTGCCTCAAAGATCTTTAGGAGAAGATTCTATAACCTTGGTACCTCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACCACAAATTCCAATTTGCCAATATCTGAAGTGGTTCCTGTACCTAGAGACTCTCATAGAATGACTACAGGTCTTAATGGTCAGAGTAATTCATCAGAGCGCACACAATATAACTCAAGGGAGGATATTGGGTCAAGACATGGTACTAACAAGTCTTCAGGTCCATCTACTCATGATCAATCAATTGCTCCAGAGCATAATGTAAACCATGGTAACAGAAACTTGAGGAGTGTTTCACCTGCTCCTCAATTGCAAGGGTCAATAATCTCTCAAAATGCTTATTCAGATAACATTTTGTCGGAAGAAAAACTGAGGGACATGTCCTTGTCAGCCATAAGAGAATACTACAGTGCTAGAGATGAGAATGAAATTGCTTTGTGTATCAAAGATTTGAACTCCCCAAGCTTCTATGCTTCTATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAAGACACAGAAAGAGATCTTTTGGCCAAACTACTTATCAACCTTGTGAAATCTCAACATCATACATTGAGTCAAGTCCAACTCATCAAAGGGTTTGAATCTGTTCTCTGTACATTGGAGGATGTCGTTAATGATGCCCCTAGAGCACCAGAGTTTCTTGGCCGAATTTTTGCTCAAGTCATAATAGAGAGAGTGGCTACTTTGAATGAGATTGCACAATTAATACATGATGGTGGAGAAGAGCCAGGTAGTCTCTTAGAAATTGGACTTGCAGGTGATGTTCTTGGAAGCACGTTGGAGGTAATTCAAAATGAAAAGGGAGACATGGTTCTAAATGAGATCCTTTCAAAAAGCTCTAATTTCCAATTGAAAACTTTCCAACCACCTGATGCTAAAATATCAAGGAAGTTGGAAAAATTTATTTAG 4971 0.406 MSFNQSKVKKSDLVYRRNGRSSGFNQQRGSYGKTGGDGGGINPLSTARSFNKKSNNAQGGQSRLNPSQGNSTDSNKASAARIISNGTHLQSQLHGGSDGPITKSSESSTGHKSTGIVPKAATAAFPPLISDPVLPTSPAKGDDESKAFPFQFGSIIPGFINGMEIPARTTSAPPKFDKQEPDQALDESYKSVSSVPIPPVPKQQKPHGKEAGVNEQSNVEETKANKDSQVSILTSVNQISKPFVAPVTGISMSTSYHQSQAPLQFGGASPQIQSQGMTTTSHQMPVPMPLPIGNATQVQQPVFIPGLQPHPMHPQGIMHQGQNISFSPQMGNQLGNMGIGIGRQYPQQQGGKFATPRKTTHVKITHPETHEELRLHKRMDAYSNGGSSGARSHPNIPSQSQPVKSFPTNHPMNYFSSNSYNTKSPYYPPNSLPLTNTPMTPNSQPPTFNFPLYHGPQGVSFMNSSSQGSPPNKTSIPAGITSMTIKPNGTTTIVDLSSSNSCIADVQNGEPPSSTISCDVSSSVLQKGSETLSEVSPQQFSRDFVTVVSNNEGGQESLSISNSLKDKKPGKKDQLSQNQVSVRSPTTDTMPSRVVDHDISDIEVPDAIGTKKNHSATIINEDLPRSNTISTAVEVETDGSVEAPAYVSVEGNAAQTIDKVHNQMPDKTYELVEGNVGSSDLQSTDLPKTTLKHAKNDLENVDGESGTKDRPIIEPNKVKNTSKGKKKRKEILQKADAAGSTSDLYNAYKGPGEKKEDVLSSESKENATTSLSLKQFDVGQSDIKASEKCDHNKVELEDWEDVADMSTPKLEVHDISQKAGDGHGSTTKKYSRDFLLKFVEQFVDLPEDFEITADIGALMNANIGGSHIFERDSHPSPGRVVDRLGGMSRMDRRGDVVVEDDRWNKVSGSFRGRGLEGVGGNSGFRFGHGGNFGVLRNPRAQAPLQYGGGILSGPMQSGGNQGGRNSPNRERWQRSANFQQRGLIPSPAQTPLQIMHKAENKYEVGKVTDVEEVKQRQLKAILNKLTPQNFDKLFEKVKEVSIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSTEEREDRRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSINMNLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSQAGGRSSRGPANNQSTRRTPIDFSPRVSSILSSSNSQMGGLCGLPPQSRGYGGSQDAQFEEQQSYETKTLSVPLPQRSLGEDSITLVPQGGLARGMSMRGSTTNSNLPISEVVPVPRDSHRMTTGLNGQSNSSERTQYNSREDIGSRHGTNKSSGPSTHDQSIAPEHNVNHGNRNLRSVSPAPQLQGSIISQNAYSDNILSEEKLRDMSLSAIREYYSARDENEIALCIKDLNSPSFYASMVSLWVTDSFERKDTERDLLAKLLINLVKSQHHTLSQVQLIKGFESVLCTLEDVVNDAPRAPEFLGRIFAQVIIERVATLNEIAQLIHDGGEEPGSLLEIGLAGDVLGSTLEVIQNEKGDMVLNEILSKSSNFQLKTFQPPDAKISRKLEKFI* 1657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00485 1656 MobiDBLite consensus disorder prediction 1360 1445 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 1412 1445 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 693 766 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 1107 1133 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 385 407 - -
Phac10g00485 1656 SUPERFAMILY ARM repeat 1011 1239 IPR016024 -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 553 590 - -
Phac10g00485 1656 SUPERFAMILY ARM repeat 1463 1654 IPR016024 -
Phac10g00485 1656 FunFam Eukaryotic translation initiation factor 4G 1015 1250 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 945 969 - -
Phac10g00485 1656 Coils Coil 1097 1117 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 381 407 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 693 720 - -
Phac10g00485 1656 Pfam MA3 domain 1473 1579 IPR003891 -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 127 148 - -
Phac10g00485 1656 ProSiteProfiles MI domain profile. 1467 1591 IPR003891 -
Phac10g00485 1656 FunFam Eukaryotic translation initiation factor 4G 1461 1655 - -
Phac10g00485 1656 SMART if4_15 1015 1237 IPR003890 GO:0003723|GO:0005515
Phac10g00485 1656 MobiDBLite consensus disorder prediction 44 114 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 1385 1402 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 1237 1261 - -
Phac10g00485 1656 SMART ma3_7 1468 1582 IPR003891 -
Phac10g00485 1656 Pfam MIF4G domain 1015 1237 IPR003890 GO:0003723|GO:0005515
Phac10g00485 1656 MobiDBLite consensus disorder prediction 1237 1331 - -
Phac10g00485 1656 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 324 1655 IPR045208 GO:0003743
Phac10g00485 1656 MobiDBLite consensus disorder prediction 18 32 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 1262 1305 - -
Phac10g00485 1656 Gene3D - 1015 1250 - -
Phac10g00485 1656 Gene3D - 1459 1656 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 165 228 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 954 969 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 574 590 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 1 114 - -
Phac10g00485 1656 MobiDBLite consensus disorder prediction 1314 1331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00485 Phac-Chr10 6135263 6146350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00485 1 1655 Eukaryotic Initiation Factors Gene Family AT3G60240 45.348 0.0 1219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00485 K03260 - gmx:100798562 2390.92