Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00484 ATGCAGCTCACGCACCTGTGCCTTATCATGCCCTCAGATTATGATAAACTAGAGCCACTTCATGATGCAACCCCACCAAAACAAAAAGGGACACAGAAAAAGGTTAAGGCCAAGAAAGACTTCCAAGGGGCATGTGGAGGCCATGTTGTTGCTGCCCTTCAAGGTTCCTTGACAAGGTTGTGTGACACAAAGTGGTGGAGTTGTCACTGGAATCTGTGCCAACATGGTGCAAGAGAAACCAAGCAGATCAAGGCCTCATCATGTGTGTTTCATGACATGGAGGGTGTGCAACTCTCTTCCAAGATTGGAAGGGACAGCAACAATCCAAGGATTTTCAGCTATGCTGAACTGTACATAGGGTCAAGGGGTTTCTCTGAGGAGGAGGTTCTAGGCAGTGGAGGGTTTGGCAAAGTGTACAAAGCTGTTATGCCTAGCGATGGAACAGTGGTGGCTGTGAAGTGTTGCTTGGCAGGGAAGGGTGGCCAGTTTGAGAAGACTTTTGCAGCAGAACTAGCGGCAGTGGCACACCTTCGCCACAAAAACCTTGTTCCCTTGAGGGGTTGGTGTGTTTTTGAGGATCAACTTTACCTTGTGTATGACTACATGCCTAATCTCAGCCTTGACAGGGTGCTGTTTCGCAAGAACTTGAAGGAGGAGGCACTTGGGTGGGTGAGGCGTGGGAAAATTGTGAAGGGTTTGGCATGTGCATTGCACTATCTGCATGAGCAGTTGGAGACTCAAATCATTCACAGGGATGTGAAGACCAGCAATGTGATGCTTGATTCCCACTACAATGCTAGGTTGGGGGACTTTGGCTTGGCAAGGTGGCTTGAGCATGAGCTTGAGTATGAGTATGAGACTAGGAAAGCATCAACAACATCAACCAAGTTTGAGCATTTCAGGTTGAGTGAGACCACAAGGATTGGTGGCACAATTGGGTACTTGCCCCCTGAGAGCTTCCAGAGAAGGAGTATTGCTACCTCAAAATCTGATGTTTTCAGCTTTGGGATCGTTGTGTTGGAGGTGGTGTGTGGAAGGAGGGCCATTGATCTCACATACCCTGATGAGAAAATCATCTTGCTTGATTGGGTCAGAAGGCTTAGTGATGAAGGGAGGCTCATTGATGCTGGGGACACAAGGCTGATATACGGTTCCTACAAGTCTTTTGAGATGGAGCATTTGATTCACATAGGCCTCTTGTGTACACTCCATGACCCTCAGTTGAGACCAAGCATGAAGTGGATTGTTGAAGCACTTTCTGACATGTCAAACAAGTTGCCATTGCCAACACTCCCTTCATTTCACTCCCATCCTATGTACATCTCTTTGTCCTCCTCTTCTGAAACTAGTCCAAGCACCTCAAAAGGCACTTCCTCAGGCACAGCAACAGAAAGTTCAAGCAATCTTACTAGTTCCATTTCCAAATATGTCACAGCCACAGGAGATACCATATATGTAACTGCTGAAGCTGAACAGAGAACCGATGGAACTAACTCTGCTAAGAATAGCAAGAGAACCATGCATCAGCAGCCATCATTTTCTGTGGTTCAAACACCTAGGGAGATACCATTCAAGGAGATTGTTTCAGCCACAAATAACTTCTCAGAGTCCAAAAGGGTGGCCGAGTTAGACTTTGGAACTGCTTACCATGGCATCCTAGATGGCCACAACCATGTCATGGTGAAACGCCTTGGCTTGAAGACATGTCCTGCACTGCGCCAAAGATTTTCCAATGAGCTAAGAAACCTGGCAAAACTTCGCCACAGGAATTTGGTGCAGCTTAGAGGGTGGTGCACTGAGCAAGGAGAGATGCTTGTGGTGTATGATTACTCAGCTAGAAGATTTCTCAGTCACCAACTTAACCATCATAACAATGGTACTAAAAATGGTTATTCTGTTCTCAAATGGCATCATAGGTATAACATAGCGAAATCACTTGCATCTGCACTTCTCTATCTGCACGAGGAATGGGATGAACAGGTCATTCACAGGAATATAACCTCTTCAGCAGTGACTCTTGAACCTGACATGACCCCAAGACTAGGTAGTTTTGCTCTGGCTGAGTTTCTGTCAAGGAATGAGCATGGCCATCATGTGATCACCACCAGGAACAAGTCTGTTTGTGGGATTTACGGCTACATGTCACCAGAATATGTGGAATCCGGAGAGGCAACAGTGGCTTCTGATGTTTATAGTTTTGGTGTGGTGGTTCTTGAGATTGTGAGTGGACTTAAGGCTGTGGATTTTAGGCAACCTGAGGTGCTTTTGGTGAAGAAGGTTCATGAATTTGAGATGAGGAAAAGATCACTTGAGGCACTAGCAGATATACAACTCAATGGAGAGTACAATTACAAGGAGCTAATGAGATTGGTAAGGTTAGGAGTTGCATGCACCCGTTCTGACCCAAAACTGAGACCAAGCACAACACAGATAGTGAGCATCCTTGATGGAAATGAGAAATTAATCGTAGAGGAGAACATGGAGAGCAGGGAAGATTGGAGAGAAAGAAACTCTTGCTCTTTGTCACTGGTTAAGAGAATCCAAGCTCTAGGAATACAATGA 2562 0.4582 MQLTHLCLIMPSDYDKLEPLHDATPPKQKGTQKKVKAKKDFQGACGGHVVAALQGSLTRLCDTKWWSCHWNLCQHGARETKQIKASSCVFHDMEGVQLSSKIGRDSNNPRIFSYAELYIGSRGFSEEEVLGSGGFGKVYKAVMPSDGTVVAVKCCLAGKGGQFEKTFAAELAAVAHLRHKNLVPLRGWCVFEDQLYLVYDYMPNLSLDRVLFRKNLKEEALGWVRRGKIVKGLACALHYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGLARWLEHELEYEYETRKASTTSTKFEHFRLSETTRIGGTIGYLPPESFQRRSIATSKSDVFSFGIVVLEVVCGRRAIDLTYPDEKIILLDWVRRLSDEGRLIDAGDTRLIYGSYKSFEMEHLIHIGLLCTLHDPQLRPSMKWIVEALSDMSNKLPLPTLPSFHSHPMYISLSSSSETSPSTSKGTSSGTATESSSNLTSSISKYVTATGDTIYVTAEAEQRTDGTNSAKNSKRTMHQQPSFSVVQTPREIPFKEIVSATNNFSESKRVAELDFGTAYHGILDGHNHVMVKRLGLKTCPALRQRFSNELRNLAKLRHRNLVQLRGWCTEQGEMLVVYDYSARRFLSHQLNHHNNGTKNGYSVLKWHHRYNIAKSLASALLYLHEEWDEQVIHRNITSSAVTLEPDMTPRLGSFALAEFLSRNEHGHHVITTRNKSVCGIYGYMSPEYVESGEATVASDVYSFGVVVLEIVSGLKAVDFRQPEVLLVKKVHEFEMRKRSLEALADIQLNGEYNYKELMRLVRLGVACTRSDPKLRPSTTQIVSILDGNEKLIVEENMESREDWRERNSCSLSLVKRIQALGIQ* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00484 853 Gene3D Phosphorylase Kinase; domain 1 493 610 - -
Phac10g00484 853 ProSitePatterns Protein kinases ATP-binding region signature. 130 159 IPR017441 GO:0005524
Phac10g00484 853 FunFam Receptor like protein kinase S.2 494 610 - -
Phac10g00484 853 SUPERFAMILY Protein kinase-like (PK-like) 511 817 IPR011009 -
Phac10g00484 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Phac10g00484 853 SMART serkin_6 124 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00484 853 MobiDBLite consensus disorder prediction 488 515 - -
Phac10g00484 853 ProSiteProfiles Protein kinase domain profile. 124 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00484 853 FunFam Receptor like protein kinase S.2 202 425 - -
Phac10g00484 853 FunFam Receptor like protein kinase S.2 612 838 - -
Phac10g00484 853 PANTHER - 86 421 - -
Phac10g00484 853 ProSiteProfiles Protein kinase domain profile. 534 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00484 853 Pfam Protein kinase domain 125 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00484 853 Gene3D Phosphorylase Kinase; domain 1 96 201 - -
Phac10g00484 853 Pfam Protein tyrosine and serine/threonine kinase 538 814 IPR001245 GO:0004672|GO:0006468
Phac10g00484 853 SUPERFAMILY Protein kinase-like (PK-like) 107 452 IPR011009 -
Phac10g00484 853 MobiDBLite consensus disorder prediction 445 467 - -
Phac10g00484 853 FunFam Receptor like protein kinase S.2 96 201 - -
Phac10g00484 853 Gene3D Transferase(Phosphotransferase) domain 1 616 839 - -
Phac10g00484 853 Gene3D Transferase(Phosphotransferase) domain 1 202 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00484 Phac-Chr10 6126037 6129003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00484 518 821 Receptor kinase-like Gene Family AT5G59270 37.049 6.54e-54 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac10g00484 PK_Tyr_Ser-Thr 2.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00484 - - gmx:100781955 1462.59