Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00481 ATGGAAAAAATGCATGATGAGTCATGGCAAAAATGGGATCCAATTTTGGAAAAGAATGACTGGCATATTTTCAGTGATTTTGACATGAACTCTGTTGGAGAAGAACTTAATAAGGAGGATGATAGTTCAGTGGATCCTGAAGAAGTCTCATGGAAAGAAAACACAGCTACCCTTCTAAGCAATTTTTTATCTTTGGAAGAGAACACTGGCTTTGACATGCCAAGTCTCACACAACAAGCTTCTCCACATAAACCACAAACTTGTGTTCTGTCATTTGAGGATTCCACTTCAGTGCCAACTGTTGGCAAGAAAACATGCCAACATCTTGGTGAACAATCAAAGCAGACACAAGAAGAAAAGCCACGCAACAGAAAATCCCTGAAGAGGAAAAGAACCTTACCTCAGACAGTAGATCACATAATAACTGAGAGAAAAAGGAGAGAGAATATCACCAGAATGTTCATTGCTCTTGCTGCCCTTATTCCTGGCTTGAAAAAGATGGACAAGGTTTCTGTTCTTAGCAATGCTGTAGAGTACGTGAAGTATCTTCAGCAGCGAGTGAAAGATTTGGAGAAAGAGAAGCAGAAGAGGAAGATAGAATCAGCAGGGTGCTTGAAACTAAGCAAAACCAACATGGTTGCTTATGACCTTTCATGGAGCTCTCATGTTCATGATGGTGACAAAACTACCAAGAAATGTTCAAAAGTTGAAGCAAGAGTAGCAGGAAAAGATGTACTAATCAGAGTAACGTGTGAGATGCAAAAGAACATTGTACGAGATGTAATGGCCAAGCTTCAAGCTCATAATCTCTCCATACTTTGCAGCAATGTTTTTCCTTTTGGAAGTTCTGCTCTCGCCATTACCACCATTGCTAAGATGAACCCTAAGTTCACCATGGCAGTGGAGGACCTAGTGAAAACGTTGAATGATGATTTGTCCAAGTGCTGTAGCCTGCCATATTAA 963 0.4039 MEKMHDESWQKWDPILEKNDWHIFSDFDMNSVGEELNKEDDSSVDPEEVSWKENTATLLSNFLSLEENTGFDMPSLTQQASPHKPQTCVLSFEDSTSVPTVGKKTCQHLGEQSKQTQEEKPRNRKSLKRKRTLPQTVDHIITERKRRENITRMFIALAALIPGLKKMDKVSVLSNAVEYVKYLQQRVKDLEKEKQKRKIESAGCLKLSKTNMVAYDLSWSSHVHDGDKTTKKCSKVEARVAGKDVLIRVTCEMQKNIVRDVMAKLQAHNLSILCSNVFPFGSSALAITTIAKMNPKFTMAVEDLVKTLNDDLSKCCSLPY* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00481 320 Coils Coil 173 200 - -
Phac10g00481 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Phac10g00481 320 PANTHER BHLH TRANSCRIPTION FACTOR 22 313 - -
Phac10g00481 320 SMART finulus 140 189 IPR011598 GO:0046983
Phac10g00481 320 Pfam Helix-loop-helix DNA-binding domain 138 184 IPR011598 GO:0046983
Phac10g00481 320 Gene3D - 134 204 IPR036638 GO:0046983
Phac10g00481 320 MobiDBLite consensus disorder prediction 107 135 - -
Phac10g00481 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 199 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00481 Phac-Chr10 6092019 6094107 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00481 89 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.506 6.62e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac10g00481 HLH 2.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00481 - - vun:114166535 412.149