Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00480 ATGAAGTGCTTTTACTATTTCAAAGACAAATCTAGAAACAGTAAGCAAAGGTCAGCACCAGAACTGAAAAAGCAAGAGAAACTGGACTTTTCAGGAGCTGAAAGGATCACCAAGTCTTCATGCTCATCTGCCTCACCCCGCGGTATACCGGAACTGTATGAGGAGAAGGGTCACAACTTGAGGGTCTTCTCCATCTCAGAGCTCAAGCATGCAACAAGTGATTTCAACAGGCTTTTTCAGATAGGAGAAGGTGGTTTTGGAAGTGTGTTTAAAGGTTCAATCCAGCCTGCTGATGGAAATGGGAATCCTACTGTAGTTGCCATCAAAAGGCTTAACAAGAATGCATTACAGGGTCATAAGGAATGGTTGACTGAAGTTCAGTTTCTTGGTGTTGTGGAACACCCAAATCTCGTAAAGCTTATTGGATACTGTGCTTTGGATGATGAACGAGGCATGCAGAGACTACTCGTGTATGAATACATGCCGAACAAAAGCTTAGAGTTTCATCTTTTCAATAAAGCATATGATCCTCTTCCTTGGAAAACTAGACTTGAAATAGCACTTGGAGCAGCTCAAGGGTTAACTTATCTGCATGAAGAATTAGAAATTCAGGTGATATATCGAGATTTTAAATCTTCAAATGTATTACTGGATAAAGACTTTAAGCCAAAGCTTTCAGATTTTGGACTTGCTAGGGAGGGGCCAGTAGCTGGTGATACTCATGTTTCAACAGCTGTGATGGGGACATATGGTTATGCTGCTCCAGATTACATTGAGACAGGTCATCTCACAGCCAAGAGTGATGTGTGGAGCTTTGGGGTGGTGCTGTATGAAATGCTTACTGGAAGGCGTTCAATGGAAAGAAACAGGCCTAAACCAGAGAAGAAACTGCTGGAGTGGGTGAAGCAGTACCCTTCTGATAGCAAGAAGTTTGACACAATAATTGATCAGAGGCTTCAAGGAGAGTATTGCATGAATGGAGCAAGAAAACTGGCGAAACTCGCCGATCATTGCCTGCGAAAGAGTGCGAAAGATCGGCCAACGATGAGTCAGGTGGTGGAGAGACTGAAGCAGATAATGGAAGACTCTGATGAAGAACAGCCTGCAGATATCAGAAGTGCTGAGGTATCAGAAAATGATGCAGCTGAAGCTGAAGTGAAGGCAAATCAGTTAGGTTCTTCAGAGTTGTGGAAAAGGAGGATGGAACATCTTGCAAAACTTGGTGAACGTGTGGAGAGTGTTAGTAGAAAAAGATTTATGATCCTTCAAAGAGCGAATGTGTCCTCATAG 1290 0.4287 MKCFYYFKDKSRNSKQRSAPELKKQEKLDFSGAERITKSSCSSASPRGIPELYEEKGHNLRVFSISELKHATSDFNRLFQIGEGGFGSVFKGSIQPADGNGNPTVVAIKRLNKNALQGHKEWLTEVQFLGVVEHPNLVKLIGYCALDDERGMQRLLVYEYMPNKSLEFHLFNKAYDPLPWKTRLEIALGAAQGLTYLHEELEIQVIYRDFKSSNVLLDKDFKPKLSDFGLAREGPVAGDTHVSTAVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSMERNRPKPEKKLLEWVKQYPSDSKKFDTIIDQRLQGEYCMNGARKLAKLADHCLRKSAKDRPTMSQVVERLKQIMEDSDEEQPADIRSAEVSENDAAEAEVKANQLGSSELWKRRMEHLAKLGERVESVSRKRFMILQRANVSS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00480 429 Gene3D Transferase(Phosphotransferase) domain 1 161 384 - -
Phac10g00480 429 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Phac10g00480 429 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00480 429 MobiDBLite consensus disorder prediction 361 382 - -
Phac10g00480 429 PANTHER OS01G0588500 PROTEIN-RELATED 26 359 - -
Phac10g00480 429 FunFam Serine/threonine-protein kinase BIK1 43 160 - -
Phac10g00480 429 MobiDBLite consensus disorder prediction 361 388 - -
Phac10g00480 429 CDD STKc_IRAK 81 359 - -
Phac10g00480 429 FunFam PTI1-like tyrosine-protein kinase 3 161 370 - -
Phac10g00480 429 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Phac10g00480 429 SUPERFAMILY Protein kinase-like (PK-like) 58 356 IPR011009 -
Phac10g00480 429 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Phac10g00480 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00480 Phac-Chr10 6054238 6059161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00480 61 397 Glycoside Hydrolase AT3G07070 44.699 1.95e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac10g00480 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00480 - - gmx:100784625 748.814