Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00448 ATGCTTTTGGAGAACTTCTACAACATATTTGGTGCCACAGAGCTAAAAAGTGAGTTTTGGACTTCATGGCAGCCATTAGAATCACCATGCTTGGTGGAGCATGTGATTTTACCTGTGGAAGTTGGGTTCTTTGTGATCTTGTTAGTCCAAATCCTAAGAAAATATGTGAACCTGATCGGCAAGGACCCAGATGGTACCACAAAGTTGATGCATCCAACAGCAATCAAATATGGTTTTTCTTACAAAGTCAGCATTGTCTGCAACACATTGTTGCTGGGTGTTCATGCATCACTGCTGCTACTGATGCTCAATCATGAGACTCAATGTACCTCAAAGCTTCAGGCCTTCACATCAGAGATAGTTCAAGTGTTATCATGGGCAACCAGTGTTATAGCAATATGCAAGATATCAAAATCAAGCACACATTTCCCTTGGATTCTGAGGGCTTGGTGGCTTTGCAGTTTCATTGTGTGTGTTATAAGCACAGGGCTTCATATCTATTTCAGTGTCACCAACAATGGTGAGATGAGTATAAGAGAATATGCAGATTTCCTTGGTTTGCTTGCTTCAACATGCCTTTTGGTTATTTCCACAAGAGGGAAGACAGGCACTGTGATGCTTGCCACAAATGGTGCAGCCGAACCACTTCTTGGAGAGAAAACTGAGAAACATTCAGAGTGTCGAAAGGAATCTCCATATGGGAAAGCCACGCTTCTCCAACTCATTAATTTCTCTTGGCTCAACCCCTTGTTTGCAATAGGGTACAAGAAAGCCCTTGAACAGAATGACATTCCTGATGTTGACATCAAAGACTCTGCTGAGTTTCTAACCTGCTCCTTTGATGAGAGCCTTAGGCAAGTCAAAGAGAAAGATGGCACTGCAAACCCCTCTATCTACAAGGCAATCTACTTGTTTGCTAGGAAGAAAGCAGCACTGAATGCATTGTTTGCAGTGGTAAATGCTTCAGCATCGTATGTTGGTCCTTACTTGATAACAGACTTTGTGGATTTCTTGGGAGAGAAGGAAACGCGTGGCTTGAAGAGTGGATACCTTCTGTCACTGGCTTTTCTCTGTGCCAAAATGGTTGAGACCATAGCTCAGAGGCAATGGATTTTTGGAGCCAGGCAATTAGGCCTTCGCCTCAGAGCAGCTTTGATATCGCATATATATCAGAAGGGCTTACATCTGTCGAGTAGATCGCGCCAGACTCACACAGGTGGGGAGATAATGAACTTCATGAGTGTAGATGTGCAGAGAATCACAGATTTTGTTTGGTATGTGAATGTAATATGGATGCTGCCAATACAAATTTCTTTAGCAGTGTTCATTCTGCATACAAATCTAGGACTAGGTTCATTGGCTGCACTAGCTGCTACATTGGGAGTGATGACTTTGAACATACCTCTGACAAAGATACAGAAAAGATACCAAGCCAAGATCATGGATGCCAAGGACAACAGGATGAAAGCCACTTCAGAAGTCCTCAGAAACATGAAGACTTTGAAGCTTCAAGCATGGGACAGTCAATTTTCTGAAAGGATAGAAGCACTCAGGAATGTAGAGTACAGTTGGCTAACAAAGTCCTTGAGGCAAGCAGCATTTTCTGCCTTTATCTTTTGGGGATCACCTACATTCATTTCTGTGATAACTTTCTGGGCATGCATGTTCATGGGGATTGAACTGACAGCAGGAAGGGTGTTGTCTGCATTTGCCACTTTCCGAATGCTGCAGGATCCTATATTCAGCCTACCTGATTTGCTCAATGTCATTGCTCAAGGAAAAGTTTCTGTTGATAGGATCGCTTCCTTCCTCCGTGAGGAAGAAATCCAGCATGATGTCATTGAAAATGTTGCAAAGGAGAAAACAGAATTTGACGTAGTTATTGAGAAAGGGAGATTCAGCTGGGATCCTGATTCAACAACTCCAACCATTGATGAAATAGAATTGAAAGTTAAGAGGGGAATGAAGGTGGCAGTTTGTGGATCTGTAGGTTCAGGAAAGTCTAGTCTGCTATCAGGCATTTTGGGAGAAATATATAAAAAGTCTGGAACAGTTAGGATCAGTGGCACAAAAGCTTATGTTCCACAATCAGCATGGATATTGACTGGAAACATAAGGGACAACATCACCTTTGGAAAAGAGTACAATGGTGATAAGTATGAGAAAACTGTTGAGGCATGTGCATTGAAAAAGGACTTTGAGCTATTCTCATGTGGTGACATGACAGAGATTGGTGAAAGAGGGATTAACATGAGTGGGGGACAGAAGCAAAGGATACAGATTGCTAGAGCAGTTTATCAGGATGCTGACATATACCTTTTTGATGACCCTTTCAGTGCTGTTGATGCTCATACTGGTACTCACCTCTTTAAGGAGTGCCTTATGGGGATTCTCAAAGAGAAAACTATAATTTTTGTTACACATCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTGATGCAAAATGGAAGGATAACACAGGCTGGAAAATTCGATGATCTTCTAAAGCAAAATATAGGATTTGAAGTTTTAGTTGGGGCTCACAGCAAAGCTCTAGAGTCAATTGTTGTTGCTGAAAACTCAAGTAGAACAAGTTTCAATTCAATAGCTGAAGAAGGAGAATCCAACTTCAACTCCAGGTCAAGTCTTCAACTAGAGAACACACAGCATGACAAAGTGCAAGATAACCCTCCAGAGGACAAAGGAAATGATGGAAAGTTGGTGCAAGAAGAGGAAAGAGAAACAGGTAGCATATCAAAAGAAGTTTACTGGACTTATTTGACCACTGTCAAAGGAGGAATGTTTATCCCTCTCATTCTTTTGGCACAATCTTCATTCCAAATACTTCAGATTGCCAGTAACTATTGGATGGCTTGGGTTTGCCCCACAAGTAGTGATGCCAAGCCTATATTTGACATGAATTTCATATTACTTATCTATATGGCACTCTCAGTTGCTGGTTCATTCTGCGTTCTGCTGCGAGCCATGATGGTTTTAAATGCTGGACTTTGGACAGCACAGTCACTTTTCACAAAGATGTTGCATAGTGTGTTCCGCGCCCCCATGGCATTTTTTGATTCTACCCCAGCTGGAAGAATTTTGAATAGGGCTTCCACAGATCAAAGTGTGCTAGACTTGGAAATGGCAAACAAAGTAGGATGGTGTGCTTTCTCAATAATACAGATTCTAGGAACTATTGCCGTGATGTGTCAGGTGGCATGGCAAGTATTTGTCATCTTCATTCCAGTAACTGCAGTCTGCATATGGTATCAAAGATATTATACCCCTACAGCTAGAGAACTGGCTCGCTTAGCACAGATACAGATCACTCCAATTCTCCACCATTTTTCAGAATCTTTGGCAGGAGCAGCATCAATACGAGCTTTTGATCAAGAAGGCCGTTTCATATACACCAATCTTATCCTTGTGGATGGCTTCTCAAGGCCATGGTTTCATAATGTGTCTGCAATGGAATGGCTTTCTTTCAGATTGAATTTACTATCAAATTTTGTTTTTGCCTTCTCACTGGTCATGCTAGTGACCCTCCCTGAAGAAATAATCAACCCAAGTATTGCCGGACTAGCAGTAACATACGGGATCAATCTGAATGTGCTGCAAGCATCAGTTATATGGAACATATGCAATGCAGAAAACAAGATGATATCAGTTGAAAGAATTCTTCAGTACACAAATATAACAAGTGAAGCACCTCTTGTGATTGAAGACAGCAGGCCCCCAAGCAATTGGCCAGAAACTGGAACAATATGTTTCAAGAATTTACAGATACGTTATGCCGAACATCTACCATCTGTGTTGAAAAACATCACTTGCACATTTCCTGGGAGGAAGAAAGTTGGTGTTGTTGGGCGTACTGGGAGTGGAAAATCAACCCTCATACAAGCCATTTTCAGGATTGTTGAACCAAGAGAAGGAAGCATTATAATTGACAATGTGGATATATGCAAGATAGGTCTCCATGACTTAAGGTCAAGGCTTAGCATTATCCCACAAGACCCTGCCTTGTTTGAAGGCACTGTTAGAGGAAACCTGGATCCTCTTCAGCATTACTCTGACATTCAAGTGTGGGAGGCTCTAGACAAATGTCAACTGGGCCACCTAGTGAGGGCCAAGGAAGAGAAGTTAGATTCCCCTGTGGTTGAAAATGGTGATAACTGGAGTGTGGGCCAAAGGCAATTATTTTGCCTTGGAAGAGCCCTGCTGAAAAGAAGCAGCATACTAGTACTAGATGAAGCAACAGCCTCAGTGGATTCTGCAACTGATGGAGTGTTGCAGAACATCATAAGTCAAGAGTTCAAAGATAGAACTGTTGTCACAATAGCTCATAGAATCCACACAGTTATTGATAGCGATTTGGTTTTGGTGCTCAGTGATGGGAGAATTGCTGAGTATGATGAACCATCAAGGTTACTTGAGAGAGAAGATTCCTTCTTCTTTAAACTTATAAAGGAGTATTCTGGAAGATCACAAAGCTTCAACAGCTTGGCAACACAACATGTCCAAAGCAGGGAACAAGTATAG 4545 0.4187 MLLENFYNIFGATELKSEFWTSWQPLESPCLVEHVILPVEVGFFVILLVQILRKYVNLIGKDPDGTTKLMHPTAIKYGFSYKVSIVCNTLLLGVHASLLLLMLNHETQCTSKLQAFTSEIVQVLSWATSVIAICKISKSSTHFPWILRAWWLCSFIVCVISTGLHIYFSVTNNGEMSIREYADFLGLLASTCLLVISTRGKTGTVMLATNGAAEPLLGEKTEKHSECRKESPYGKATLLQLINFSWLNPLFAIGYKKALEQNDIPDVDIKDSAEFLTCSFDESLRQVKEKDGTANPSIYKAIYLFARKKAALNALFAVVNASASYVGPYLITDFVDFLGEKETRGLKSGYLLSLAFLCAKMVETIAQRQWIFGARQLGLRLRAALISHIYQKGLHLSSRSRQTHTGGEIMNFMSVDVQRITDFVWYVNVIWMLPIQISLAVFILHTNLGLGSLAALAATLGVMTLNIPLTKIQKRYQAKIMDAKDNRMKATSEVLRNMKTLKLQAWDSQFSERIEALRNVEYSWLTKSLRQAAFSAFIFWGSPTFISVITFWACMFMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLREEEIQHDVIENVAKEKTEFDVVIEKGRFSWDPDSTTPTIDEIELKVKRGMKVAVCGSVGSGKSSLLSGILGEIYKKSGTVRISGTKAYVPQSAWILTGNIRDNITFGKEYNGDKYEKTVEACALKKDFELFSCGDMTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFKECLMGILKEKTIIFVTHQVEFLPAADLILVMQNGRITQAGKFDDLLKQNIGFEVLVGAHSKALESIVVAENSSRTSFNSIAEEGESNFNSRSSLQLENTQHDKVQDNPPEDKGNDGKLVQEEERETGSISKEVYWTYLTTVKGGMFIPLILLAQSSFQILQIASNYWMAWVCPTSSDAKPIFDMNFILLIYMALSVAGSFCVLLRAMMVLNAGLWTAQSLFTKMLHSVFRAPMAFFDSTPAGRILNRASTDQSVLDLEMANKVGWCAFSIIQILGTIAVMCQVAWQVFVIFIPVTAVCIWYQRYYTPTARELARLAQIQITPILHHFSESLAGAASIRAFDQEGRFIYTNLILVDGFSRPWFHNVSAMEWLSFRLNLLSNFVFAFSLVMLVTLPEEIINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNITSEAPLVIEDSRPPSNWPETGTICFKNLQIRYAEHLPSVLKNITCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPREGSIIIDNVDICKIGLHDLRSRLSIIPQDPALFEGTVRGNLDPLQHYSDIQVWEALDKCQLGHLVRAKEEKLDSPVVENGDNWSVGQRQLFCLGRALLKRSSILVLDEATASVDSATDGVLQNIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSRLLEREDSFFFKLIKEYSGRSQSFNSLATQHVQSREQV* 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00448 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 622 849 IPR003439 GO:0005524
Phac10g00448 1514 Gene3D - 1240 1492 IPR027417 -
Phac10g00448 1514 SUPERFAMILY ABC transporter transmembrane region 926 1239 IPR036640 GO:0005524|GO:0016020
Phac10g00448 1514 MobiDBLite consensus disorder prediction 894 915 - -
Phac10g00448 1514 CDD ABCC_MRP_domain1 626 826 - -
Phac10g00448 1514 Pfam ABC transporter 645 778 IPR003439 GO:0005524
Phac10g00448 1514 ProSitePatterns ABC transporters family signature. 751 765 IPR017871 GO:0005524|GO:0016887
Phac10g00448 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 592 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g00448 1514 CDD ABC_6TM_ABCC_D2 938 1232 IPR044726 GO:0140359
Phac10g00448 1514 Gene3D ABC transporter type 1, transmembrane domain 284 612 IPR036640 GO:0005524|GO:0016020
Phac10g00448 1514 SUPERFAMILY ABC transporter transmembrane region 307 608 IPR036640 GO:0005524|GO:0016020
Phac10g00448 1514 SMART AAA_5 653 826 IPR003593 GO:0016887
Phac10g00448 1514 SMART AAA_5 1283 1475 IPR003593 GO:0016887
Phac10g00448 1514 CDD ABCC_MRP_domain2 1255 1475 - -
Phac10g00448 1514 FunFam ABC transporter C family member 10 294 608 - -
Phac10g00448 1514 Gene3D ABC transporter type 1, transmembrane domain 902 1238 IPR036640 GO:0005524|GO:0016020
Phac10g00448 1514 CDD ABC_6TM_ABCC_D1 312 600 IPR044746 GO:0140359
Phac10g00448 1514 MobiDBLite consensus disorder prediction 873 893 - -
Phac10g00448 1514 FunFam ABC transporter C family member 5 901 1238 - -
Phac10g00448 1514 Pfam ABC transporter transmembrane region 950 1184 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g00448 1514 Pfam ABC transporter transmembrane region 313 575 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g00448 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 940 1220 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac10g00448 1514 FunFam ABC transporter C family member 3 1240 1492 - -
Phac10g00448 1514 Gene3D - 621 852 IPR027417 -
Phac10g00448 1514 FunFam ABC transporter C family member 5 611 858 - -
Phac10g00448 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1248 1485 IPR027417 -
Phac10g00448 1514 Coils Coil 473 493 - -
Phac10g00448 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 842 IPR027417 -
Phac10g00448 1514 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 235 1494 - -
Phac10g00448 1514 Pfam ABC transporter 1274 1422 IPR003439 GO:0005524
Phac10g00448 1514 MobiDBLite consensus disorder prediction 873 915 - -
Phac10g00448 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1259 1491 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00448 Phac-Chr10 5514996 5526837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00448 605 840 Calmodulin-binding Proteins AT2G36910 29.644 9.83e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00448 - - gmx:100809749 2724.5