Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00385 ATGAAGTTGGTTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGTCAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGGTGATGGCACAACACTTATGGTTAAGAGATTACAGGAATCTCAGTATACTGAAAAGGAATTCATGTCTGAGATGGGTACACTAGGGACTGTCAAGCATCGCAACCTTGTTCCCCTTTTAGGCTTTTGCATGGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAATCTCCATGACCAACTCCATCCCGCCGATGGTGCGAGCACCCTTGACTGGACTACAAGACTCAAAATTGCAGTTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATTATCCACCGAAACATAAGCTCAAAGTGCATCTTGTTGGACGCAGATTTTGAGCCAAAAATTTCTGATTTCGGCCTTGCCAGACTAATGAACCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGTGATTTGGGTTATGTTGCTCCTGAGTACGCAAGAACTTTGATTGCCACACCCAAGGGGGATGTTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTGACTGGTGAAAGACCTACCAATGTGGCTAAAGCTCAAGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTAACAAACAATGCAAAACTCCATGATGCCATTGATGAATCATTAGTCAACAAGGATGTTGACAGTGAGCTTTTCCAATTTCTCAAGGTTGCATGCAACTGTGTTCTGCCAACTCCAAAGGAGAGGCCAACCATGTTTGAAGTGTATCAGTTTTTAAGAGCTATTGGGGCTAGATACAATTTCACAGCTGATGATGAGATCTTGGTACCTACTGATAATGGTGATGCTGATAACATGGAGGAACTTATTGTAGCTCGAGAATGA 969 0.4241 MKLVDLMKATNNFSNTNIIGSGRTGTVYKAVLGDGTTLMVKRLQESQYTEKEFMSEMGTLGTVKHRNLVPLLGFCMAKKERLLVYKNMPNGNLHDQLHPADGASTLDWTTRLKIAVGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLIATPKGDVYSFGTVLLELVTGERPTNVAKAQETFKGNLVEWITELTNNAKLHDAIDESLVNKDVDSELFQFLKVACNCVLPTPKERPTMFEVYQFLRAIGARYNFTADDEILVPTDNGDADNMEELIVARE* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00385 322 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 290 - -
Phac10g00385 322 CDD STKc_IRAK 19 287 - -
Phac10g00385 322 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 88 308 - -
Phac10g00385 322 Gene3D Transferase(Phosphotransferase) domain 1 88 304 - -
Phac10g00385 322 ProSiteProfiles Protein kinase domain profile. 13 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00385 322 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Phac10g00385 322 Pfam Protein tyrosine and serine/threonine kinase 16 286 IPR001245 GO:0004672|GO:0006468
Phac10g00385 322 SUPERFAMILY Protein kinase-like (PK-like) 4 287 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00385 Phac-Chr10 5029040 5030008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00385 1 297 Receptor kinase-like Gene Family AT1G27190 54.027 3.62e-112 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Phac10g00385 PK_Tyr_Ser-Thr 4.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00385 - - gsj:114405114 592.423