Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00363 ATGGGGCGCGTGAGAACGAAGACGGTGAAGAAATCCTCACGGCAAGTGATCGAGCGTTACTACTCGAGGATGACGCTGGATTTTCACACGAACAAGAAGCTTCTAGAAGAAGTGGCCATCGTCCCCTCGAAGAGGCTGCGGAACAAGATCGCAGGTTTCTCCACACATCTCATGAAACGGATCCAGAAGGGTTCTGTTCGCGGCATCTCGCTCAAGCTGCAGGAGGAGGAGAGGGAGCGACGCATGGACTTCGTTCCCGACATCTCCGCCATCAACACCGACCACATCGAGGTCGACAAGGAAACCATGGATATGCTCCACTCCCTCGGACTCAACGATATCAGCGGCATCACCCAGGTTGACCCTGTCCCTGTCCAACAAAACTTCCCCTTCACCAGGAGGTACTGA 408 0.5466 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKLLEEVAIVPSKRLRNKIAGFSTHLMKRIQKGSVRGISLKLQEEERERRMDFVPDISAINTDHIEVDKETMDMLHSLGLNDISGITQVDPVPVQQNFPFTRRY* 136
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00363 135 FunFam 40S ribosomal protein S17 1 62 - -
Phac10g00363 135 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Phac10g00363 135 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Phac10g00363 135 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Phac10g00363 135 PANTHER 40S RIBOSOMAL PROTEIN S17 1 129 IPR001210 GO:0003735|GO:0005840|GO:0006412
Phac10g00363 135 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Phac10g00363 135 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac10g00363 Phac-Chr10 4777069 4777765 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00363 1 122 Cytoplasmic Ribosomal Protein Gene Family AT2G05220 86.066 4.39e-75 218
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00363 K02962 - gmx:100500063 259.225