Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00355 ATGGAGTCTTGTGGTACTATGTGCTTGTGTTTGGTCTTACTTCATATTTTCCTGTGCTTTGTGTCAACACAATCAGCACCAGAAAGTGCCACTGTGACTCAGGTTCCTGGCTTCAGTGGGACTCTACCTTCCAAGCACTATGCTGGGTATGTGACAGTGGGTGAGAATCATGGGAAGAACTTGTTTTACTATTTTGTTGAATCACAGGGTAAACCTTCTGAGGACCCTGTGGTTTTGTGGCTTAATGGGGGACCTGGCTGCTCTAGTTTTGATGGATTCGTATATGAGCATGGTCCTTTTAATTTTGAGGCAGCAAAGACAAAGGGGGGTCTTCCCACACTACACCTCAATCCATACAGCTGGTCAAAGGTTTCCAGTGTTATATATTTGGATTCTCCTGCTGGTGTGGGGTTTTCATACTCAAAAAATGCAACTGATTACATAACTGGAGACACAAAGACTGCCTCTGATTCACATGACTTTCTCCTTAAGTGGTTTGAACTATACCCTGAGTTCCTTTCCAACCCGTTCTTCATTGCTGGAGAGTCCTATGCAGGAGTGTATGTGCCTACTCTTGCTTCTGAAGTTGTGAAAGGAATTGAGGCTGGTGTGGAGCCCAAGCTAAATTTCAAGGGTTACATGGTTGGAAATGGTGTCACAGATGACCAATTTGATGGCAATGCTCTTATTCCATTTGTACATGGGATGGGACTTATCTCAGATGACCTGTTTAAGGAGGTGACCACTGAGTGCAACGGGAATTTTTATAATCCAACCAATGAAAGTTGTTTTATCAAGCTTGCAAAAGTTGATAAGTTGATTGATGGGATAAACATTTACAACATCCTAGAACCATGCTATCATGGCACAGAGGCAGTGAATATTACTGAATCCTATATTAAGTTGCCATCTAGCTTCCGGAAGTTGGGTGAGACTGAAAAACCTTTCCCAGTGAGGAAAAGAATGTTCGGTCGTGCTTGGCCCCTAAGAGCACCTGTGAGAGATGGAATTGTACCAACTTGGCCACAGCTGATGAATTTGCAGCTTTCTCCACCATGCACGGACGACGTGGTTGCAAACGCATGGTTGAACGATGAAGCAGTCAGGACAGCAATTCATGCTGCACAGAAAAGTGAAGTCAGTAGTTGGGATATATGCACAGACAGAATTACCTATGATCATGATGCTGGGAGCATGATCAACTACCACAAGAACTTAACTTCCAAAGGTTATAGAGCACTTATATTCAGTGGTGATCATGACATGTGTGTACCATATACGGGGAGTCAGGCCTGGACAAGATCGATTGGATACAAGATTGTTGATGAATGGAGGCCATGGTCTTCCAATGGTCAAGTTGCTGGGTACACACAAGGATACGACAAAAATCTTACTTTTCTGACCATAAAGGGATCAGGGCATACTGTTCCTGAATATAAACCAGTAGAGGCATTGGACTTTTACAAACGCTTTTTAGCTGGAATTCCAATATGA 1494 0.4324 MESCGTMCLCLVLLHIFLCFVSTQSAPESATVTQVPGFSGTLPSKHYAGYVTVGENHGKNLFYYFVESQGKPSEDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKTKGGLPTLHLNPYSWSKVSSVIYLDSPAGVGFSYSKNATDYITGDTKTASDSHDFLLKWFELYPEFLSNPFFIAGESYAGVYVPTLASEVVKGIEAGVEPKLNFKGYMVGNGVTDDQFDGNALIPFVHGMGLISDDLFKEVTTECNGNFYNPTNESCFIKLAKVDKLIDGINIYNILEPCYHGTEAVNITESYIKLPSSFRKLGETEKPFPVRKRMFGRAWPLRAPVRDGIVPTWPQLMNLQLSPPCTDDVVANAWLNDEAVRTAIHAAQKSEVSSWDICTDRITYDHDAGSMINYHKNLTSKGYRALIFSGDHDMCVPYTGSQAWTRSIGYKIVDEWRPWSSNGQVAGYTQGYDKNLTFLTIKGSGHTVPEYKPVEALDFYKRFLAGIPI* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00355 497 FunFam Carboxypeptidase 352 496 - -
Phac10g00355 497 Pfam Serine carboxypeptidase 36 493 IPR001563 GO:0004185|GO:0006508
Phac10g00355 497 ProSitePatterns Serine carboxypeptidases, histidine active site. 464 481 IPR033124 GO:0004185
Phac10g00355 497 FunFam Carboxypeptidase 399 494 - -
Phac10g00355 497 SUPERFAMILY alpha/beta-Hydrolases 31 496 IPR029058 -
Phac10g00355 497 Gene3D alpha/beta hydrolase 24 318 IPR029058 -
Phac10g00355 497 Gene3D - 350 496 - -
Phac10g00355 497 FunFam Carboxypeptidase 25 309 - -
Phac10g00355 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Phac10g00355 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Phac10g00355 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Phac10g00355 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Phac10g00355 497 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Phac10g00355 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 481 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00355 Phac-Chr10 4653948 4659764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00355 358 497 Calmodulin-binding Proteins AT2G22960 47.857 3.17e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00355 K16296 - gmx:100792057 929.858