Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00328 ATGAGCGACGGCGAAAGCGCCTCCGATCGATCGTTCAATTTCGAGGACGTGACAGTGGTCTCCGCCGTGGGGCGCGGCGCCAAGGGCGTGGTGTTCCTGGCGCGCGCCGGCGGGCGGTGGTCGAGCGAGTGCGTGGCGCTAAAAGTGATGTCGAAGGCGCTGATTGCGCAGAAGAGGACGAGAAAGGAGGAGGAGGAGGAGTACGGGAGAGTGTCGTTTGAAGAGGAAGTGCTCCGTCGTTTCGATCACCCGCTCTTGCCAAGGCTGAGAGGCGTTTTGGAAACGGAGAAAGTGGTTGCGTTCGCCATTGATTACTGCCACGGCGGCACGCTCCACTCTCTCAGGAAGAAACAGACTGAGAAAATGTTCTCCGATGACACCATCAGGTTTTACGCTGTGGAATTGGTGCTTGCGTTGGAATATTTACACGAATTGGGAATAGTATACAGAGATTTGAAGCCAGAAAATGTGATGATTCAAGAAAACGGCCACATAATGCTCGTCGATTTTGATCTCTCCAAAAAGCTAAACCCCAAGTCCCCTAACTCACTGAGTCAGAACTCGTCCCCGAGTCCTAACTCGGAGAAACGTACAAGTAAACAACAACGATTAACTCGTTTATACAGATTTTGTAACTCGGGCATCTCACCGTGGGACTCGGACTCGGAGCCCCCACTCAGTACCGCCGACTCAGCGCGTCGCACCGAGTCCGACTCAGTTGAGAAATCAAACTCGTTCGTCGGAACAGAGGAGTACGTGGCACCGGAAATCTTATCAGGGAAAGGTCACGGGTTTAGCGTAGATTGGTGGTCATACGGCATCCTTTTGTACGAGATGCTATACGGAACGACGCCGTTTAAAGGCTCAAATAAAAAGGAAACGTTCTACCGAATTTTAACAAAAACGGCAGAGTTAACCGGAGAGAAGACGGCGTTACGGGATTTAATCGCGAGATTGTTGGAAAAAGATCCTGAGCGTCGGATCCAGGTGGAGGAGATCAAGGGCCACGATTTCTTCAAAGGGGTTAAGTGGGAGGAAGTGTTGCACATTGCAAGACCACCTTATATTCCCGAAAATGAGGTGGAGAACAAAGTGGGGTTTAGCAAAAACGACGTCGAAGTGTTCGTGAACCAAGTGTTTTTTCCCACGAATGATGATGATGGCGTAGAGAATTCTGAGAACGACAACAACACAGCATGGGTTCATGAATTGAATCACATTCCCACTCAGAAGAATGACGATTTTTTAATTTTTTGA 1257 0.498 MSDGESASDRSFNFEDVTVVSAVGRGAKGVVFLARAGGRWSSECVALKVMSKALIAQKRTRKEEEEEYGRVSFEEEVLRRFDHPLLPRLRGVLETEKVVAFAIDYCHGGTLHSLRKKQTEKMFSDDTIRFYAVELVLALEYLHELGIVYRDLKPENVMIQENGHIMLVDFDLSKKLNPKSPNSLSQNSSPSPNSEKRTSKQQRLTRLYRFCNSGISPWDSDSEPPLSTADSARRTESDSVEKSNSFVGTEEYVAPEILSGKGHGFSVDWWSYGILLYEMLYGTTPFKGSNKKETFYRILTKTAELTGEKTALRDLIARLLEKDPERRIQVEEIKGHDFFKGVKWEEVLHIARPPYIPENEVENKVGFSKNDVEVFVNQVFFPTNDDDGVENSENDNNTAWVHELNHIPTQKNDDFLIF* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00328 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Phac10g00328 418 SUPERFAMILY Protein kinase-like (PK-like) 18 366 IPR011009 -
Phac10g00328 418 ProSiteProfiles Protein kinase domain profile. 17 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00328 418 SMART serkin_6 17 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00328 418 MobiDBLite consensus disorder prediction 215 245 - -
Phac10g00328 418 MobiDBLite consensus disorder prediction 215 233 - -
Phac10g00328 418 Pfam Protein kinase domain 240 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00328 418 Pfam Protein kinase domain 19 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00328 418 ProSiteProfiles AGC-kinase C-terminal domain profile. 340 418 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phac10g00328 418 FunFam Serine/threonine-protein kinase OXI1 241 358 - -
Phac10g00328 418 Gene3D Phosphorylase Kinase; domain 1 17 109 - -
Phac10g00328 418 PANTHER FLIPPASE KINASE 1-RELATED 12 364 - -
Phac10g00328 418 Gene3D Transferase(Phosphotransferase) domain 1 110 179 - -
Phac10g00328 418 Gene3D Transferase(Phosphotransferase) domain 1 237 358 - -
Phac10g00328 418 MobiDBLite consensus disorder prediction 179 201 - -
Phac10g00328 418 FunFam Serine/threonine-protein kinase OXI1 110 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00328 Phac-Chr10 4412941 4415308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00328 1 418 AGC Kinase Gene Family AT3G25250 54.965 1.18e-152 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phac10g00328 Pkinase 1.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00328 K20714 - gmx:100785773 629.787