Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00316 ATGGAGTTGGCTTCTTCATCATCATCATCTTCATCCTTCTTAAAATCAGAACCCCAGTTCATATACGATGTGTTCATCAACTTTTGGGGAGAAGACATAGGTAGAAAGTTGGTTTCTCATCTCCATTCTGTCCTTTTGCAAGCTCAAGTCAAAACTTTGATTAAGGAGGAGAATCTGCAGGAGGAAAGGGAGCTGGAAGAACACATGCGAGCAATAGCAGCCTCTAAGATTGCAATAATCGTTTTCTCCAAATCATACACTGAATCTACCTGCTGTCTTCTTCAGCTTCAAAAAATCATTGAATGCCACGAAACATTTGGTCAAATAATTCTTCCCATATTTTACGAGATTGATCCATCGGATGTACGCGATCAGAAGGATGATTTCGGAAAAGCGTTGGAAGAAGCTGCACACAAAAGCTATTCAGGAGAGCAACTGGAACATGCATTGTCCAGGTGGAGGTGTGCACTCACCACTTCTGCAGGTATCAGTGGTTGGGATATCAAAGATTTCAGGCATGATGCTGAACTTGTGGAGAAAATTGTTTTCCGCGTTCTTGCATTGCTGGACTATGAAGACTTGTCAATTACCCAATTTCCTGTTGGATTAGACTCGCAGGTGGAAAAGGTGATTGGATGTATTGAAAATCATTCCACGAAAGTGTGTATGATAGGGATATGGGGAATGGGAGGATCAGGTAAAACTACCATAGCCAAAGCCATCTATAATCGAATTTATCGTCCATTCATTGCTAAGAGTTTTACTGAAAATATTAGAGAAGTTTGGGATCCAGTAAGGCATGTTGATTTACAAGAAAATCTTCTTTGTGATGTCCTAAAATCCAAGCCCGACGTGGAAATCTTTGGGATTGGAAGAACTAGGATCAAGGACAAACTTTCTCGAAAAAAGTTGCTGATTGTGCTTGATGATGTGAATGAGTTTGACCAATTAGAAAACGTATGCGGGAATCGTGAATGGTTCGGTCAAGGAACTGTGATAATCATTACAACTAGAGATGTTCATGTACTGAACCAACTCAAAGTTGATTATGTTTATAAAATGGATTATATGAACGAAGATGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTAGAGAAGCAAAACCAAGAAAAGACTTTAATGAACTTGCAAGAAACACAGTTGCTTATTGTGGAGGACTACCACTAGCTCTTAAGGTCCTTGGTTCCTTTTTATGTGATAAGACAATGAAAGAGTGGGAAAGTGTATCGTCAAAACTAAAAATAATTCCGATGGATCAAGTTCAAAACATATTGAAAATAAGTTTTGACGGTTTACGCAATCACATGGAAAAGGATGTATTTCTTGATATATGTTTTTCCTTTTCGTAA 1371 0.3866 MELASSSSSSSSFLKSEPQFIYDVFINFWGEDIGRKLVSHLHSVLLQAQVKTLIKEENLQEERELEEHMRAIAASKIAIIVFSKSYTESTCCLLQLQKIIECHETFGQIILPIFYEIDPSDVRDQKDDFGKALEEAAHKSYSGEQLEHALSRWRCALTTSAGISGWDIKDFRHDAELVEKIVFRVLALLDYEDLSITQFPVGLDSQVEKVIGCIENHSTKVCMIGIWGMGGSGKTTIAKAIYNRIYRPFIAKSFTENIREVWDPVRHVDLQENLLCDVLKSKPDVEIFGIGRTRIKDKLSRKKLLIVLDDVNEFDQLENVCGNREWFGQGTVIIITTRDVHVLNQLKVDYVYKMDYMNEDESLELFSWHAFREAKPRKDFNELARNTVAYCGGLPLALKVLGSFLCDKTMKEWESVSSKLKIIPMDQVQNILKISFDGLRNHMEKDVFLDICFSFS* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00316 456 Pfam NB-ARC domain 205 437 IPR002182 GO:0043531
Phac10g00316 456 Gene3D - 195 351 IPR027417 -
Phac10g00316 456 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 454 IPR044974 GO:0006952
Phac10g00316 456 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 166 IPR035897 -
Phac10g00316 456 Coils Coil 51 71 - -
Phac10g00316 456 PRINTS Disease resistance protein signature 298 312 - -
Phac10g00316 456 PRINTS Disease resistance protein signature 223 238 - -
Phac10g00316 456 PRINTS Disease resistance protein signature 391 405 - -
Phac10g00316 456 Gene3D - 16 194 IPR035897 -
Phac10g00316 456 Gene3D - 356 440 IPR042197 -
Phac10g00316 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 451 IPR027417 -
Phac10g00316 456 SMART till_3 21 163 IPR000157 GO:0007165
Phac10g00316 456 Pfam TIR domain 22 185 IPR000157 GO:0007165
Phac10g00316 456 ProSiteProfiles TIR domain profile. 20 189 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00316 Phac-Chr10 4318708 4320948 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00316 22 453 WRKY Transcription Factor Family AT4G12020 28.375 9.84e-39 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00316 - - pvu:PHAVU_010G028400g 770.77