Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00312 ATGGAATCGTCGTCTTCATCATCAAATCTGCCACGGATGTACGATGTGCTCATAAACTTCAATGGAGAAGACATCCAAAGGAGATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCTTCACCACTTTCCTTCACCACCCCAATGCAGACAACCCAATTCACTTCCAACAACCTATTCTCAATCTCTCTCGTGTAGCCATTGTTGTTTTCACCAAATCCTATTCTCAATCTGCTTGGTGTCTTAATCAGCTTCAACAAATCATCAAATGGCACCAAACTTATTGTCGACATGTTCTGCCCGTTTATTACGAAATTCACCCATCTGATGTACGTCTTCAAAAGGGTGATTTTGGAAAAGCCTTCAAAGCAACTGCACACCAAACATTCTCACGACAACAACTGAGGCAGGGCATGTCCAGATGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAACAATCACAGGAGTGATGCTGAACTAGTGGACACAATTGTTAAGATCGTTCTTCATTTACCAATCTTGTCTGCTACAAAATTTCCTGTTGGATTACAATCCCGTGTGGAAGATGTGATTCTAACCATAAAAAGTAAATCCACCCAAGTTTTTACTATAGCGATATGTGGAATGCGAGGATCGGGTAGAACCACTCTTGCCAAAGCCATCTACAATCAAATTCATCATACATTCACGGAGAAAAGTTTCATTGAAGATATTGCAGAAGTTAGTCAAACAAGAGGGTATGCTCATTTACAAGAACAACTTCTTTCAGATGTACTAAAAACAAAGGTGGAGATTAGTGGCGTTGAGATGGGAAGAAGTATGATTCGGGAAAGGCTTTCTGGGAAAAGGGTGCTTCTTGTACTTGACGATTTGAATGAGAATGGCCAAATAGACCTCTGGGGAAGTAGTCCACGGTTCTGCAAAGGAACTGTAATAATCATTACAGCGAGAGATGAAGACCTACCGAGTATGCTTCAAGTTGATTCTGTTTTTCGGATGATTCCAATGAACGCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAAAAAGAAAACCATTTACTTGCAAAAAGAGCAGTTGCTTATTGTGGAGCACTACCTCTAACTCTCGAAGTCATTGGAACTTATTTATACAAAAGGACGAAAGATGAATGGGATAGAGTATTGAAAAGATTAGACAATATTCCCCAGCATGAAGTTCCACAGATATTGAAAATAAGCTTCGACGGTTTAGCTAATCAAATAGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAAAGCAGAGCCTATGTTACCAAGATCCTAAATGGCTGTGGAGTAGACCATGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCATCAAAGTTAAAGAAAACAACAAATTTGGAATGCATCACTTGCTACGAGAAATGGGAAATGAAATTATTAGTCGACTGTGGTGGTTTGATAAGGATGCAAGATATTCACCGCCAGAGAATACGCTCTTTTCATCTGAGAACACAAAAGTCATTCAGAGATTGCCTACCGTAAGAGATATCTTCGGACGCCAGGTAATAGACACATCAAGACTGCTGAAACTCGGTGGAGATCCTGAGTACTATTTTAAGAAACTGAGATGGATCAGTTTGCGAGGGTTTTCTTCAAAATACCTACCTAACGACTTTTATCTGCATGATGCAATAGTGATTGACTTAAAACACAGTCTTCTTCGATTCTTTTGGAAAGAACCCAAGGTTTTGACGTGGCTAAAAGTCCTTAATCTTAGTCACTCCAAGTACTTGATAGAAACCCCTGACTTTTCCGGACTACCAAGTCTTGAGGAGCTCATTCTCAAAGATTGTCCAAGATTGAGCCAAGTACACCCTTCTATTGGATGTCTCTGCAATCTTATACTGCTAAATTTGAAGGACTGTACAAGTCTAAGCAATCTCCCCCAAGAGATATATGAGCTGAAATGTTTAAAAACTCTGATTCTATCTGGTTGTTCGAAGATTGAACTAATGGAAAAAGATATCGTGCTAATGAAATCCTTGATAACTATAATTGCTGAAAATTCAACTATGAAACAATTGCCTTTTACAATTGTAAGCCCAAAAAGTATTGGATATATATCCCTACGTGGATTTGAGGGATTGTCACATAATTTTTTTCCTTCTATCATTCGGTCTCTGATGTCGCCAACAATGAATCCCTTATCTTATATTCATTCCTTCATGGATATGGACGATAATAGTGGGGATGATATTTCATCATTGCTTAGCAGCCTTGCAAATCTTCGAAGTGTTTTGGTGCAATGTGACGCCAAGTTTCAACTATATGAGCAAGTAAAAACTATATTGGTCGAATATGATGCAAATATTACAGAATCAGGAATTTCAAAGCATAATTTCAGGTATTCTCTGACTGGTGTTGGAAGATACAAAGAATTCTTCAATACTGTGAGCGATAGCATACCTAAGGTATTTGCAAGCAGTGAGTCATGTGATGTTTCTCTCCCAGGTGACAACGATCCTTATTGGTTGGCCTATATGGGTGATGGACATTCTGTTTCTTTCACTGTGCCTCAAGATCGTGTGGTGAAGGGAATGGCTTTGTGTGTTGTTTATTTATCAACCTCCGAAATCATTGAACCTAAACTTAGTACTGTCTTAATTGTTAATTACACGAAGTGCACATGCCAGATACACAACCATGGCACGGTAATTTCCTTTAATGATGAAGATTGGCATGACATAATGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTGGTGACTTTTGGTGATGGATTGGTGGTCAAGAACACAGCTGTCTATTTGATATGTGGTGAATCAAATGAGTTAGAAAAGGAGCCTGTGCCAAAGAAAAAATCTCTCCTTAAATTCATAAAGAAAACTCTAATGTGA 2967 0.3896 MESSSSSSNLPRMYDVLINFNGEDIQRRFVSHLDSALSAVGFTTFLHHPNADNPIHFQQPILNLSRVAIVVFTKSYSQSAWCLNQLQQIIKWHQTYCRHVLPVYYEIHPSDVRLQKGDFGKAFKATAHQTFSRQQLRQGMSRWSHALTKAANFFGWDENNHRSDAELVDTIVKIVLHLPILSATKFPVGLQSRVEDVILTIKSKSTQVFTIAICGMRGSGRTTLAKAIYNQIHHTFTEKSFIEDIAEVSQTRGYAHLQEQLLSDVLKTKVEISGVEMGRSMIRERLSGKRVLLVLDDLNENGQIDLWGSSPRFCKGTVIIITARDEDLPSMLQVDSVFRMIPMNANESLELLSWHAFREPKPKKENHLLAKRAVAYCGALPLTLEVIGTYLYKRTKDEWDRVLKRLDNIPQHEVPQILKISFDGLANQIEKDLFLDVCCFFVGKSRAYVTKILNGCGVDHDSGIRVLIKRNLIKVKENNKFGMHHLLREMGNEIISRLWWFDKDARYSPPENTLFSSENTKVIQRLPTVRDIFGRQVIDTSRLLKLGGDPEYYFKKLRWISLRGFSSKYLPNDFYLHDAIVIDLKHSLLRFFWKEPKVLTWLKVLNLSHSKYLIETPDFSGLPSLEELILKDCPRLSQVHPSIGCLCNLILLNLKDCTSLSNLPQEIYELKCLKTLILSGCSKIELMEKDIVLMKSLITIIAENSTMKQLPFTIVSPKSIGYISLRGFEGLSHNFFPSIIRSLMSPTMNPLSYIHSFMDMDDNSGDDISSLLSSLANLRSVLVQCDAKFQLYEQVKTILVEYDANITESGISKHNFRYSLTGVGRYKEFFNTVSDSIPKVFASSESCDVSLPGDNDPYWLAYMGDGHSVSFTVPQDRVVKGMALCVVYLSTSEIIEPKLSTVLIVNYTKCTCQIHNHGTVISFNDEDWHDIMSNLGSGDKVEILVTFGDGLVVKNTAVYLICGESNELEKEPVPKKKSLLKFIKKTLM* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00312 988 SUPERFAMILY "Winged helix" DNA-binding domain 413 501 IPR036390 -
Phac10g00312 988 Gene3D - 343 426 IPR042197 -
Phac10g00312 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 436 IPR027417 -
Phac10g00312 988 Pfam NB-ARC domain 193 412 IPR002182 GO:0043531
Phac10g00312 988 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Phac10g00312 988 Pfam TIR domain 14 175 IPR000157 GO:0007165
Phac10g00312 988 Gene3D - 11 178 IPR035897 -
Phac10g00312 988 SUPERFAMILY L domain-like 545 778 - -
Phac10g00312 988 Gene3D - 179 337 IPR027417 -
Phac10g00312 988 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 705 IPR044974 GO:0006952
Phac10g00312 988 SMART till_3 13 153 IPR000157 GO:0007165
Phac10g00312 988 PRINTS Disease resistance protein signature 210 225 - -
Phac10g00312 988 PRINTS Disease resistance protein signature 377 391 - -
Phac10g00312 988 PRINTS Disease resistance protein signature 285 299 - -
Phac10g00312 988 PRINTS Disease resistance protein signature 668 684 - -
Phac10g00312 988 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 156 IPR035897 -
Phac10g00312 988 Gene3D Ribonuclease Inhibitor 541 692 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00312 Phac-Chr10 4293716 4297730 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00312 14 684 WRKY Transcription Factor Family AT4G12020 26.301 3.02e-54 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00312 - - vun:114165123 1283.47