Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00309 ATGGAGCTGGAAGAACACATGCGGGCAATAGCAGCCTCTAAGATTGCAATAATCGTTTTCTCCAAATCATACACTGAATCTACCTGCTGTCTTCTTCAGCTTCAAAAAATCATTGAAAGCTACGAAACTTTTGGGCAAATAGTTCTGCCCATATTTTACGAGATTGACCCATTGGACGTACGTGATCAGAAGGATGATTTGGGAAAAGCGTTGGAAGAAGCTGCACACAAAAGCTATTCAGGAGAGCAACTGGAGCATGCATTGTCCAGGTGGAGCCGTGCACTCATCACAGCTGCAGGTATCAGTGGTTGGGATGTCAGAGATTTCAGGCATGATGCTGAACTTGTGGAGCAAGTTGTTTTCCGCATTCTTGAATTGCTGGACTATAAAGACTTGTCTATTACCCAATTTCCTGGGACAGAAGCTACCCAGGGATTGTCCCTGAAACTGCATTCGACCAGCAGAGATTGCTTCAAAGCTCGTGCTTTCAAGAAAATGAAGAGATTAAGACTGCTACAACTGGATCATGTAAAACTTACTGGAGATTATGGGTACCTTTCTAAACAATTGAGATGGATTTGTTGGCAAGGGTTTCGTTCTAAGTACATACCAAATAACTTTCATATGGAAAATTTAATTGCAATTGATTTAAAACATAGTCATCTTCAACTCGTCTGGAAACAACCCCAGGTTTTAAAGTGGTTAAAATTCCTTAATCTTAGTCACTCCAAGTTTTTGAGAGAAACACCTGACTTTTCAGGACTACCAAGTCTTGAAAAACTCATTCTAAAAGATTGCCCAAGTTTGTGCAAGGTACACCAATCCATTGGAGATCTCCACAATCTAGTACTGATAAATTTGAAAGACTGCACAAGTCTAAGCAATCTCCCCAGAGAGGTATATAGGTTGAAATCTTTAAGAACTTTCATCCTCTCTGGTTGTTTCAAGGTTAATATATTGAAAGAAGATATAGCGCAGATGAAATCCTTGATAACTCTTGTTGCTGAAAATACAGCTGTGAAAGCAAGTGTGTTACAAGTGTCTAAATGGTTAATTACACAAAGTGCACATTACAAATACAAAAGCATGGCAGAGTAA 1098 0.3944 MELEEHMRAIAASKIAIIVFSKSYTESTCCLLQLQKIIESYETFGQIVLPIFYEIDPLDVRDQKDDLGKALEEAAHKSYSGEQLEHALSRWSRALITAAGISGWDVRDFRHDAELVEQVVFRILELLDYKDLSITQFPGTEATQGLSLKLHSTSRDCFKARAFKKMKRLRLLQLDHVKLTGDYGYLSKQLRWICWQGFRSKYIPNNFHMENLIAIDLKHSHLQLVWKQPQVLKWLKFLNLSHSKFLRETPDFSGLPSLEKLILKDCPSLCKVHQSIGDLHNLVLINLKDCTSLSNLPREVYRLKSLRTFILSGCFKVNILKEDIAQMKSLITLVAENTAVKASVLQVSKWLITQSAHYKYKSMAE* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00309 365 Gene3D Ribonuclease Inhibitor 124 353 IPR032675 -
Phac10g00309 365 Gene3D - 2 123 IPR035897 -
Phac10g00309 365 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 131 IPR044974 GO:0006952
Phac10g00309 365 Pfam TIR domain 8 125 IPR000157 GO:0007165
Phac10g00309 365 ProSiteProfiles TIR domain profile. 1 127 IPR000157 GO:0007165
Phac10g00309 365 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 104 IPR035897 -
Phac10g00309 365 SUPERFAMILY L domain-like 150 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00309 Phac-Chr10 4262022 4264904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00309 139 359 WRKY Transcription Factor Family AT4G12020 31.667 1.01e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00309 - - pvu:PHAVU_010G027900g 387.882