Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00307 ATGGAGTTCGGTTCTTCTTCATCATCATCATCGTCTTCATCCTTCTTGAAATCAGAACCCCAGTTCAGATACGATGTGTTCATCAACTTTTGGGGAGAAGACATCGGTAGAAAGTTGGTTTCTCATCTCCATTCTGTACTTTTACAAGCTAAAGTCAAAATTTTGATCAAGGAGGAGAATCTGCAGGGAATGGAGCTGGAAGAACACTTGCGAGCAATAGCAGCCTCTAAGATTGCAATAATTGTTTTCTCCAAATCATATACCGAATCTACCTGCTGTCTTCTTCAGCTTCAAAAAATCATTGAATGCCAAGAAACTTTTGGCCAAATAGTTCTGCCCATATTTTATGAGATTGACCCATTGGATGTACGTGATCAGAAGGATGATTTTGGAAAAGCGTTGGAAGAAGCTGCACACAAAATCTATTCAGGAGAACAACTGGAACATGCATTGTCAATGTGGAGCCATGCACTCACCAAAGCTGCAGGTATCAGTGGTTGGGATGTCAGAGATCTCAGGCATGATGCTGAACTTGTGGAGCAAAATGTTGGCCGCGTTCAGACATTGTTGGGCTATGCAGACTTGCCTATTACCCAATTTCCTGTTGGATTAGACTCTCAGGTGGAAAAGGTGATTGGATGTATTGAAAATCATTCAACCAAAGTGTGCATGATAGGGATATGGGGAATGGGAGGATCAGGTAAAACTACCATAGCCAAAGCCATCTATAATCGAATTTATCGTCCATTCATCGGTAAGAGTTTTTTTGAAAATATTAGACAAGTTTCGGATCGAGTATTTAAAAGGTGTTATCCTTTGCAAAAAAATCTTCTTTATGATGTCCTAAAATCCAAGCTTGAGGTGGAAAGCGTTTGGATGGGAAGAACTATGATCCAGAACGTACTTTCTCGAAAAAAGTTGTTGATTGTGCTTGATGATGTGAATGAGTTTGACCAATTAGAAAATCTATGTGGGAATCGTGAATGGTTCGGTCAAGGAACTGTGGTAATCATTACAACTAGAGATGTTCACGTACTGAACAGACTCAAAGTTGACTATGTTTATAAAATGGATGATATGAACGAAAATGAGACCCTTGAGCTTTTTAGTTGGCATGCCTTTAGAGAAGCAAAACCAAGAAAAGACTTCAATGAACTTTCAAGAAACATAGTTGCTTACTGTGGAGGACTACCACTAGCTCTTGAGGTCCTTGGTTCCACTTATCGTGAAAATAGAATAGGACCGTGGAAAATTTTATCGTCAAAACTAAAAATATTTTCCGTTGATGATGTTCATAATGTATTAAAAATAAGTTTTGACAGTTTACATGACAGGGATCAGGATATATTTCTTGATGTATGTTGTTTCTTTATTGGTAAAGATAGAGGCTATGTCACAGAGACACTAAATGGATGTGGACTACCTGCTGATATTGGAATAAGAGTTCTCATAGAGCGTGGTCTCATAAAAGTTGAAAGGAACAACAAACTTCAAATGCATCCTTTCTTACTAGACATGGCAAGACAAATTATTTGTCAACTTTGGCCAAAGAAACTGGGGAAATGGAGTCGATTATGGTTTCAGGATGATGAAAAAGATGCATTGAAAAAGAATAGTGGGACAGAAGCTACCCAGGGATTGTCCCTGAAACTGCATTCGACCAGCAGAGATTGCTTCAAAGCTCGTGCTTTCAAGAAAATGAAGAGATTAAGACTGCTACAACTGGATAATGTACAACTTACTGGAGATTATGGGTACATTTCTAAACAATTGAGATGGATTTGTTGGCAAGGGTTTCCTTCTAAGTACATACCAAATAACTTTCATATGGAAAATGTAATTGCAATTGATTTAAAACATAGTCATCTTCAACTCGTCTGGAAACAACCCCAGGTTTTAAAGTGGCTAAAATTCCTTAATCTTAGTCACTCCAAGTTTTTGAGAGAAACACCTGACTTTTCAGGACTACCAAGTCTTGAAAAGCTCATTCTAAAAGATTGCCCAAGTTTGTGCAAGGTACACCAATCCATTGGAGATCTCCGCAATCTACTACTGGTAAATTTGAAGGACTGCACAAGTCTAAGCAATCTCCCCAAAGAGATATATAAGTTGAAATCTTTAAGAACTTTCATCCTTTCTGGTTGTTTCAAGATTGGCATATTGGAAGAAGATATAGTGCAGATAAAATCCTTGATAACTCTAGTTGCTGAAAATACATCTGTGAAACAAGTGCCCTTTTCAATTGTAAGCTCAAAAAGCATTGGATATATATCCCTACGTGGATTTGAAGGATTGTCAACTAGTATTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAACACTGAATCCCCAATCTTTTGTTAGTCCGTTTTGCATGGATATGGAGAATAATAATTGGCGTGACCTTGCGCCATTGCATAGCAGCCTTGCAAATCTTCGCAGTATTTTGGTTCAAGGGGACACGGAGTTTCAACTATCTAATGAAGTGAAAACAATTCTTGTTGAATACGGTGTAAATTTTACAGAATCAAGAATTTCAAAGCATCACTTGAGGTTTTCTTTGATTGGTGTTGGAAGTTACAATGAATTCCTCAATACTCTCAGCAATAGCGTTTCTGAGGGATTGGCAAGTAGTGAGTCTTGTGATGTTTCTCTTCCAGGTGATAACCATCCTTATTGGTTGGCCAATGTGGGTGAGGGACAATCAGTTTGTTTCAATGTGCCTCAGGATTGTGACATGAAGGGAATGGTTTTGTGTGTTGTTTATTTATCAACCCCTGAAATCGTGGCAACTGAATGTCTTGCAAGTGTCTTAGTGGTTAATTACACAAAGTGCACATTACATATGCACAGGCATGGCAGAGTAATTTCCTTCAATGATGAAGATTGGCATGGCATAATGTCAAGTTTAGGATCAGGAGACAACGTGGAGATTTTTGTGACTTTTGGTCATGGATTGGTGGTTAACACAGTTGCCTATCTGATATATGGCGAATCAAATGACTTGGAAATGGATTCTTGCCTTGAGCTAAAGGAAAATACCTTAATTAAATTCTTTAAGAAAATGGTAATGTGTGACTTCTGCTGA 3090 0.3825 MEFGSSSSSSSSSSFLKSEPQFRYDVFINFWGEDIGRKLVSHLHSVLLQAKVKILIKEENLQGMELEEHLRAIAASKIAIIVFSKSYTESTCCLLQLQKIIECQETFGQIVLPIFYEIDPLDVRDQKDDFGKALEEAAHKIYSGEQLEHALSMWSHALTKAAGISGWDVRDLRHDAELVEQNVGRVQTLLGYADLPITQFPVGLDSQVEKVIGCIENHSTKVCMIGIWGMGGSGKTTIAKAIYNRIYRPFIGKSFFENIRQVSDRVFKRCYPLQKNLLYDVLKSKLEVESVWMGRTMIQNVLSRKKLLIVLDDVNEFDQLENLCGNREWFGQGTVVIITTRDVHVLNRLKVDYVYKMDDMNENETLELFSWHAFREAKPRKDFNELSRNIVAYCGGLPLALEVLGSTYRENRIGPWKILSSKLKIFSVDDVHNVLKISFDSLHDRDQDIFLDVCCFFIGKDRGYVTETLNGCGLPADIGIRVLIERGLIKVERNNKLQMHPFLLDMARQIICQLWPKKLGKWSRLWFQDDEKDALKKNSGTEATQGLSLKLHSTSRDCFKARAFKKMKRLRLLQLDNVQLTGDYGYISKQLRWICWQGFPSKYIPNNFHMENVIAIDLKHSHLQLVWKQPQVLKWLKFLNLSHSKFLRETPDFSGLPSLEKLILKDCPSLCKVHQSIGDLRNLLLVNLKDCTSLSNLPKEIYKLKSLRTFILSGCFKIGILEEDIVQIKSLITLVAENTSVKQVPFSIVSSKSIGYISLRGFEGLSTSIFPSIIRSWMSPTLNPQSFVSPFCMDMENNNWRDLAPLHSSLANLRSILVQGDTEFQLSNEVKTILVEYGVNFTESRISKHHLRFSLIGVGSYNEFLNTLSNSVSEGLASSESCDVSLPGDNHPYWLANVGEGQSVCFNVPQDCDMKGMVLCVVYLSTPEIVATECLASVLVVNYTKCTLHMHRHGRVISFNDEDWHGIMSSLGSGDNVEIFVTFGHGLVVNTVAYLIYGESNDLEMDSCLELKENTLIKFFKKMVMCDFC* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00307 1029 Gene3D Ribonuclease Inhibitor 512 837 IPR032675 -
Phac10g00307 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 452 IPR027417 -
Phac10g00307 1029 SMART till_3 23 164 IPR000157 GO:0007165
Phac10g00307 1029 ProSiteProfiles TIR domain profile. 22 190 IPR000157 GO:0007165
Phac10g00307 1029 Gene3D - 189 354 IPR027417 -
Phac10g00307 1029 PRINTS Disease resistance protein signature 678 694 - -
Phac10g00307 1029 PRINTS Disease resistance protein signature 224 239 - -
Phac10g00307 1029 PRINTS Disease resistance protein signature 301 315 - -
Phac10g00307 1029 PRINTS Disease resistance protein signature 394 408 - -
Phac10g00307 1029 SUPERFAMILY L domain-like 513 817 - -
Phac10g00307 1029 Gene3D - 359 443 IPR042197 -
Phac10g00307 1029 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 167 IPR035897 -
Phac10g00307 1029 Pfam TIR domain 24 179 IPR000157 GO:0007165
Phac10g00307 1029 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 738 IPR044974 GO:0006952
Phac10g00307 1029 Gene3D - 17 188 IPR035897 -
Phac10g00307 1029 Pfam NB-ARC domain 206 431 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00307 Phac-Chr10 4206560 4219451 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00307 24 770 WRKY Transcription Factor Family AT4G12020 28.701 2.60e-74 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00307 - - pvu:PHAVU_010G027900g 1588.55