Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00304 ATGGCATGTCCAGATGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAACAATCACAGTTGGGTTACAATACCAAGTGGAGGCTCTGATTCGAACTATCAAAAGTAAATCCAGGAAAGTTTTTACCATAGCGATATGTGGAATGGGAGGATCGGGTAAAACCACTCTTGCCAAAGCCATCTACAATCAAATTCATGGTACATTCACGAAGAGAAGTTTCATTGAAGATATTGGACAATTTAGTGGAATAAGAGGGGATCTTCGTTTACAAGAACAACTTCTTTCAGATGTTCTAAAAACGAAGGTGAAGATAAGCAGCGTTGAGATGGGAAAAAGAATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGCTCATTGTACTTGACGATGTGAATGAGTATGGTCCATTAGACATATGGGGAAGTAGTTCATGGTTCAGCGAAGGAACTCTAATAATCATTACAACGAGAGATGAAGAGCTGCCGAGTATGCATGAAGTTGATTATGTTTTTCGGATACATCCAATGAACACAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAACAAGAATACTATTTACTTGCAGACAGAGTAGTTACTTATTGTCGAGGACTACCTTTAGCTCTTGAAATCATTGGAACTTATTTATATAAAAGGACGGAAGAAAAATGGAATAGAGTATTGTTAAGATTATACAATATTCGCCCGCATAAAGTTCTACAGATATTGAAAATAAGCTTCGACGGTTTACGTAATCAAACAGAAAAAGATTTATTCCTTGATATATGTTGTTTCTTTGTTGGTAAAAGGAGAGCCTTTGTTACCAAGATCCTAAATGGCTGTGGAGTAGACCCTGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCATCAAAGTTAAAGAAAACAACAAATTAGGAATGCATCATTTGCTACGAGAAATGGGAAGAGAAATTATTGATGAAATTTCAAGAAAGGAATCTGGGAAGAACAGTCGACTGTGGCTTGATGAGGATCGAAAATATGCATTGTCAGAGACTACTCTCTTTTCATCACCGGATACAAAAGTCATTCAGAAATTGCCCACCGGAAGAGATTTCTTCGAAATTAATCCTTTAGAAATCGACCCATCAACACTGCTGAAACTCTCTAGAGATTCTGAGAACCATTCTAAGAAACTGAGATGGATCAGTTTGCAAGGGTTTCCTTCAGAATACCTACCTAACGACTTTTATGTGCATGATGCAATAGCCATTGGTTTGAAACACAGTCTTCTTCGATTCGTCTGGAAAGAATCTCAGGTTTTGGCGTGTCTAAAAGTCCTGAATCTTAGTCACTCGAAGTACTTGACAAAAACCTCTGACATTTCGAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCTAGATTGTGCGAAGTACACCAATCTATTGGTTGTCTCCACAATCTTATACTGCTAAATTTGAAGGACTGTACAAGTCTAAGCACTCTCCCCAGAGAAATATATAAGTTGAAATCTTTGAAAACTCTCATTATATCTGGTTGTTCAAAAATTGACCTATTGGAAAAAGATATAGTGCAACTAGAATCTTTGAGAACTCTAATTTCCGAAAATACAGATGTGAAACAAGTGCCTTTTTCAATTATAAGCTCAAAAAGCTTTGGATATTTATTCTTACCTGGATTTGAGGGATTATCTCATAATCTTTTTCCTTCTGTGATTCGGTCTCGGATGTCGCCAACAATGAATCCCTTATCTTATACTCATTCCTTCATGGATATGGAGGATAATAGTTGGGATGATATTTCACCATTGCTTAGCAGCCTTGCGAATCTTCGAAGGGTTTTGGTGCAATGTGACGCCAAGTTTCAACTACATGAGCAAGTAAAAACTATATTGGTCGAATATGATTCAAATATTACAAAATCAAAAATTTCAAAGCATAATTTCAGGTCTTCTCTGACTGGTGTTGGAAGATACAAAGAATTCTTCAATACTGTGAGCGATAGCATACCTAAGGTATTTGCAAGCAGTGAGTCATGTGATGTTCCTCTCCCAGGTGACAACGATCCTCATTGGTTGGCCCATATGGGTGATGGACATTCTGTTTCTTTCACTGTGCCTCAAGATCGTGAGGTGAAGGGAATGGCTTTGTGTGTCGTTTATTCATCAACCTCCGAAATCATTGAACCTAAACATACTGCTGTCTTAATTGTTAATTACACGAAGTGCACATGCCAGATACACAACCGTGGCACAGTAATTTCCTTTAATGATGAAGATTGGCATGACATAATGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTGTGACTTTTGGTCACGATTTGGTGATTAAGAGCACAACTGTGTACCTGATATATGGTGAGCCAAGGAAAAATTCCCTCATTAGATTCATAAAGAAAATTGTAATGTGA 2487 0.38 MACPDGATHSPKLQISLDGMRTITVGLQYQVEALIRTIKSKSRKVFTIAICGMGGSGKTTLAKAIYNQIHGTFTKRSFIEDIGQFSGIRGDLRLQEQLLSDVLKTKVKISSVEMGKRMIRERLSGKRVLIVLDDVNEYGPLDIWGSSSWFSEGTLIIITTRDEELPSMHEVDYVFRIHPMNTNESLELLSWHAFREPKPKQEYYLLADRVVTYCRGLPLALEIIGTYLYKRTEEKWNRVLLRLYNIRPHKVLQILKISFDGLRNQTEKDLFLDICCFFVGKRRAFVTKILNGCGVDPDSGIRVLIKRNLIKVKENNKLGMHHLLREMGREIIDEISRKESGKNSRLWLDEDRKYALSETTLFSSPDTKVIQKLPTGRDFFEINPLEIDPSTLLKLSRDSENHSKKLRWISLQGFPSEYLPNDFYVHDAIAIGLKHSLLRFVWKESQVLACLKVLNLSHSKYLTKTSDISRLPSLEQLILKDCPRLCEVHQSIGCLHNLILLNLKDCTSLSTLPREIYKLKSLKTLIISGCSKIDLLEKDIVQLESLRTLISENTDVKQVPFSIISSKSFGYLFLPGFEGLSHNLFPSVIRSRMSPTMNPLSYTHSFMDMEDNSWDDISPLLSSLANLRRVLVQCDAKFQLHEQVKTILVEYDSNITKSKISKHNFRSSLTGVGRYKEFFNTVSDSIPKVFASSESCDVPLPGDNDPHWLAHMGDGHSVSFTVPQDREVKGMALCVVYSSTSEIIEPKHTAVLIVNYTKCTCQIHNRGTVISFNDEDWHDIMSNLGSGDKVEIFVTFGHDLVIKSTTVYLIYGEPRKNSLIRFIKKIVM* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00304 828 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 555 IPR044974 GO:0006952
Phac10g00304 828 SUPERFAMILY "Winged helix" DNA-binding domain 250 352 IPR036390 -
Phac10g00304 828 PRINTS Disease resistance protein signature 47 62 - -
Phac10g00304 828 PRINTS Disease resistance protein signature 122 136 - -
Phac10g00304 828 PRINTS Disease resistance protein signature 517 533 - -
Phac10g00304 828 PRINTS Disease resistance protein signature 214 228 - -
Phac10g00304 828 SUPERFAMILY L domain-like 394 628 - -
Phac10g00304 828 Gene3D - 180 263 IPR042197 -
Phac10g00304 828 SMART AAA_5 44 181 IPR003593 GO:0016887
Phac10g00304 828 Gene3D Ribonuclease Inhibitor 373 543 IPR032675 -
Phac10g00304 828 Pfam NB-ARC domain 28 244 IPR002182 GO:0043531
Phac10g00304 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 274 IPR027417 -
Phac10g00304 828 Gene3D - 19 174 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00304 Phac-Chr10 4181334 4185491 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00304 25 535 WRKY Transcription Factor Family AT5G45050 30.331 2.11e-60 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00304 - - pvu:PHAVU_010G029600g 1084.32