Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00303 ATGGAATTGGCCTCTTCATCATCCAAAATCCCACAGATGTACGATGTGCTCATCAACTTTAATGGAGAAGACATTCAAAGAAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCTTCACCACTCTCCTTCACCACCCCAATGCACTCAACCAAACGCACATCCAAGAACCTATTCTCAATCTCTCTCGTGTAGCAATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATTCAATGGCACCAAACTTATTGCCGCCATGTTCTGCCCGTTTATTACGAAATTCAGCCATCTGATGTACGTCTTCAAAAGGGTGATTTTGGAGAATCTTTCAAAGCAACTGCACACCAAACATTCTCACCACAACAACTGAGGCATGGCATGTCCAGATGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAACAATCACAGGAGTGATGCAGAACTAGTGGACAAAATTGTTAAGATCGTTCTTAATTTACCAATCTTGTCTGCTACTAAATTTCCAGTTGGGTTACAATACCAAGTGGAGGCTCTGATTCGAACTATCAAAAGTAAATCCAGGAAAGTTTTTACCATAGCGATATGTGGAATGGGAGGATCGGGTAAAACCACTCTTGCCAAAGCCATCTACAATCAAATTCATGGTACATTCACGAAGAGAAGTTTCATTGAAGATATTGGACAATTTAGTGGAATAAGAGGGGATCTTCGTTTACAAGAACAACTTCTTTCAGATGTTCTAAAAACGAAGGTGAAGATAAGCAGCGTTGAGATGGGAAAAAGAATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGCTCATTGTACTTGACGATGTGAATGAGTATGGTCCATTAGACATATGGGGAAGTAGTTCATGGTTCAGCGAAGGAACTCTAATAATCATTACAACGAGAGATGAAGAGCTGCCGAGTATGCATGAAGTTGATTATGTTTTTCGGATACATCCAATGAACACAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAACAAGAATACTATTTACTTGCAGACAGAGTAGTTACTTATTGTCGAGGACTACCTTTAGCTCTTGAAATCATTGGAACTTATTTATATAAAAGGACGGAAGAAAAATGGAATAGAGTATTGTTAAGATTATACAATATTCGCCCGCATAAAGTTCTACAGATATTGAAAATAAGCTTCGACGGTTTACGTAATCAAACAGAAAAAGATTTATTCCTTGATATATGTTGTTTCTTTGTTGGTAAAAGGAGAGCCTTTGTTACCAAGATCCTAAATGGCTGTGGAGTAGACCCTGATAGTGGAATAAGAGTTCTCATAAAGCGTAACCTCATCAAAGTTAAAGAAAACAACAAATTAGGAATGCATCATTTGCTACGAGAAATGGGAAGAGAAATTATTGATGAAATTTCAAGAAAGGAATCTGGGAAGAACAGTCGACTGTGGCTTGATGAGGATCGAAAATATGCATTGTCAGAGACTACTCTCTTTTCATCACCGGATACAAAAGTCATTCAGAAATTGCCCACCGGAAGAGATTTCTTCGAAATTAATCCTTTAGAAATCGACCCATCAACACTGCTGAAACTCTCTAGAGATTCTGAGAACCATTCTAAGAAACTGAGATGGATCAGTTTGCAAGGGTTTCCTTCAGAATACCTACCTAACGACTTTTATGTGCATGATGCAATAGCCATTGGTTTGAAACACAGTCTTCTTCGATTCGTCTGGAAAGAATCTCAGGTTTTGGCGTGTCTAAAAGTCCTGAATCTTAGTCACTCGAAGTACTTGACAAAAACCTCTGACATTTCGAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCTAGATTGTGCGAAGTACACCAATCTATTGGTTGTCTCCACAATCTTATACTGCTAAATTTGAAGGACTGTACAAGTCTAAGCACTCTCCCCAGAGAAATATATAAGTTGAAATCTTTGAAAACTCTCATTATATCTGGTTGTTCAAAAATTGACCTATTGGAAAAAGATATAGTGCAACTAGAATCTTTGAGAACTCTAATTTCCGAAAATACAGATGTGAAACAAGTGCCTTTTTCAATTATAAGCTCAAAAAGCTTTGGATATTTATTCTTACCTGGATTTGAGGGATTATCTCATAATCTTTTTCCTTCTGTGATTCGGTCTCGGATGTCGCCAACAATGAATCCCTTATCTTATACTCATTCCTTCATGGATATGGAGGATAATAGTTGGGATGATATTTCACCATTGCTTAGCAGCCTTGCGAATCTTCGAAGGGTTTTGGTGCAATGTGACGCCAAGTTTCAACTACATGAGCAAGTAAAAACTATATTGGTCGAATATGATTCAAATATTACAAAATCAAAAATTTCAAAGCATAATTTCAGGTCTTCTCTGACTGGTGTTGGAAGATACAAAGAATTCTTCAATACTGTGAGCGATAGCATACCTAAGGTATTTGCAAGCAGTGAGTCATGTGATGTTCCTCTCCCAGGTGACAACGATCCTCATTGGTTGGCCCATATGGGTGATGGACATTCTGTTTCTTTCACTGTGCCTCAAGATCGTGAGGTGAAGGGAATGGCTTTGTGTGTCGTTTATTCATCAACCTCCGAAATCATTGAACCTAAACATACTGCTGTCTTAATTGTTAATTACACGAAGTGCACATGCCAGATACACAACCGTGGCACAGTAATTTCCTTTAATGATGAAGATTGGCATGACATAATGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTGTGACTTTTGGTCACGATTTGGTGATTAAGAGCACAACTGTGTACCTGATATATGGTGAGCCAAGGAAAAATTCCCTCATTAGATTCATAAAGAAAATTGTAATGTGA 2976 0.3854 MELASSSSKIPQMYDVLINFNGEDIQRKFVSHLDSALSAVGFTTLLHHPNALNQTHIQEPILNLSRVAIVVFTKTYSQSAWCLHQLQQIIQWHQTYCRHVLPVYYEIQPSDVRLQKGDFGESFKATAHQTFSPQQLRHGMSRWSHALTKAANFFGWDENNHRSDAELVDKIVKIVLNLPILSATKFPVGLQYQVEALIRTIKSKSRKVFTIAICGMGGSGKTTLAKAIYNQIHGTFTKRSFIEDIGQFSGIRGDLRLQEQLLSDVLKTKVKISSVEMGKRMIRERLSGKRVLIVLDDVNEYGPLDIWGSSSWFSEGTLIIITTRDEELPSMHEVDYVFRIHPMNTNESLELLSWHAFREPKPKQEYYLLADRVVTYCRGLPLALEIIGTYLYKRTEEKWNRVLLRLYNIRPHKVLQILKISFDGLRNQTEKDLFLDICCFFVGKRRAFVTKILNGCGVDPDSGIRVLIKRNLIKVKENNKLGMHHLLREMGREIIDEISRKESGKNSRLWLDEDRKYALSETTLFSSPDTKVIQKLPTGRDFFEINPLEIDPSTLLKLSRDSENHSKKLRWISLQGFPSEYLPNDFYVHDAIAIGLKHSLLRFVWKESQVLACLKVLNLSHSKYLTKTSDISRLPSLEQLILKDCPRLCEVHQSIGCLHNLILLNLKDCTSLSTLPREIYKLKSLKTLIISGCSKIDLLEKDIVQLESLRTLISENTDVKQVPFSIISSKSFGYLFLPGFEGLSHNLFPSVIRSRMSPTMNPLSYTHSFMDMEDNSWDDISPLLSSLANLRRVLVQCDAKFQLHEQVKTILVEYDSNITKSKISKHNFRSSLTGVGRYKEFFNTVSDSIPKVFASSESCDVPLPGDNDPHWLAHMGDGHSVSFTVPQDREVKGMALCVVYSSTSEIIEPKHTAVLIVNYTKCTCQIHNRGTVISFNDEDWHDIMSNLGSGDKVEIFVTFGHDLVIKSTTVYLIYGEPRKNSLIRFIKKIVM* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00303 991 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Phac10g00303 991 SUPERFAMILY L domain-like 557 791 - -
Phac10g00303 991 Pfam TIR domain 14 175 IPR000157 GO:0007165
Phac10g00303 991 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Phac10g00303 991 SMART till_3 13 153 IPR000157 GO:0007165
Phac10g00303 991 Gene3D - 178 337 IPR027417 -
Phac10g00303 991 SUPERFAMILY "Winged helix" DNA-binding domain 413 515 IPR036390 -
Phac10g00303 991 PRINTS Disease resistance protein signature 377 391 - -
Phac10g00303 991 PRINTS Disease resistance protein signature 285 299 - -
Phac10g00303 991 PRINTS Disease resistance protein signature 210 225 - -
Phac10g00303 991 PRINTS Disease resistance protein signature 680 696 - -
Phac10g00303 991 Gene3D - 343 426 IPR042197 -
Phac10g00303 991 Gene3D - 11 177 IPR035897 -
Phac10g00303 991 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 718 IPR044974 GO:0006952
Phac10g00303 991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 437 IPR027417 -
Phac10g00303 991 SMART AAA_5 207 344 IPR003593 GO:0016887
Phac10g00303 991 Pfam NB-ARC domain 191 407 IPR002182 GO:0043531
Phac10g00303 991 Gene3D Ribonuclease Inhibitor 541 707 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00303 Phac-Chr10 4181334 4185491 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00303 14 726 WRKY Transcription Factor Family AT4G12020 27.725 1.28e-64 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00303 - - vun:114165123 1291.95