Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00299 ATGGAAACGGAATCGTCTCCGCCATCATCGAAATCCGAATGGAAATACGACGTGTTCATCAATTTCAGGGGAGTAGACACCCGCCGGAAGTTCGTTTCTCATCTCCATTCTGCTCTCTCAAAAGCTGGAGTGAAAACGTTCCTTGACGAGGAGAATCTGCTGAAGGGAATGGAGCAGCAAGAACTATTGCGAGCAATACAAGTGTCTCAGATAGCAATAGTAGTTTTCTCCAAAAGATACGCTGAATCGAGTTGGTGTCTTGATGAGCTTGAAAAAATCTTTGAATGTCGCCAAACTTGTTGCCAAAAAGTTTTACCTGTATTTTACTATGTTCAACCATCCGAGGTACGAGAGCAGACGGGTGATTTTGGAGATGTGTTGAGAGCAGCTGCAGAAAATAGGTATGAAGATACGTTGTTGAGGTGGAGCCGCACACTCACCAAAGCTGCAAATTTGGCGGGGTGGGATGTCAGGAAAAGCAGGTCTGAAGCTGAGCTAGTGGGTGACATTGTTAAAGACGTTATTAACAAACTTGATTACAATGTCTTGTCTATCACGGAATTTCCTGTTGGGTTAGATCATCGAGTGCAAGAAGTGATTAGATTTATTGAAAGAACCAAAAATTCTTGTAGGATAGGGATATGGGGAATGGGAGGATCTGGTAAAACTACCATTGCTAAAGCCATCTACAATAAACTTCATCGTTTATTCGAGAACAAAAGTTTCATTGAAGATATTAGAGAAGTTTGTCAAACAGATAGAAGAGGGCTCGTTCGTTTGCAGGAAAAACTTCTTTCAGATGTCCTGAAAGCAAAGGTGGAGATACAAAGCGTTGGGATCGGACAAACTATGATAGACAACCGATTTATTGGAAAAAGGGCGCTTATTATTCTTGATGATGTGAATGAGTTTGACCAACTAGAAGCTCTATGTGGAAATACTCAGTGGATTGGTGAATCAAGTGTAATAATTATTACAACTAGCGATCTGCATCTGCTGAAGAGATTTGAAGTTGATTATGTTTATGAAATGAAGGAAATGGAAGCAAATGAGTCACTTGAGCTTTTTAGTTGGCATGCTTTCAGAGAAGCAAAACCAAGAGAAGATTTCAATGAACTTGCAAAAAATGCAGTTGCTTATTGTGGTGGACTACCACTAGCTCTTGAAGTCCTTGGTTCTTATTTGAGAAAGAGGACAGTGAGTGAGTGGAGAAGTGTGTTGTCAAAGCTAAAAATAAGTCTCAATGCCCAAGTCCAAGCGAAACTAAGAATAAGCTTTGAGAATTTATTGGATCAAATGGAAAAGGATATATTTCTTGATGTGTGTTGTGTCTTTATAGGTAAGGACAGAGGCTGTGTGACCGAGGTACTAAACGGCTGTGGACTATATGCTGATATTGGAATAACAGTCCTCTTAGAGCGTAGCCTCATAAAAGTCGAAAAGAACAACAAACTCATAATGCATCCTTTGTTACGAGACATGGGAAGAGAGATTATTCGTGAAGGTTCAAGAAAAGAACCTGGGAAGTGCAGTAGATTGTGGTTTCAAGAGGATGTACGTGATGTATTGACAAATAGCACTGGGACAGATGCTGTTGAGGGATTGGCTCTGAAATTGAATTTAACCAACAGAGAATGCTTTAAAGCTGATGCTTTTGAGGAAATGAGGAGTTTGAGACTGTTGCAACTTCATCATGTAGAACTCACGGGAGATTATGGCTTTCTTTCTAAGCAATTGAGATGGATCTATTGGCAAGGGTTTCCTTCAACATACATACCTAACAACTTCTATCTGGGAGATGCAATTGCAATTAATTTGAAACACAGTAATCTTAGACAAGTATGGAAAGAACCCAAGGCTTTACACATGTTAAAGTTCCTCAATCTTAGTCATTCCAAGTACTTGACAGAAACCCCTGACTTTTCTGGACTACCAAATCTTGAAAAGCTCGTTCTCAAATATTGTCCAAGTTTGCGCTGTGTACACAAATCGATTGGAGATCTCAGTAATATTGTGTTGATAAATTTGAAGGATTGTACAAGCCTAAGCAATCTTCCCAGAGAGATATATAAGTTGAAATCTTTGAAAACTCTCATCCTATCTGGTTGTTCGAAGATTGACAAATTCGAAGAAGATATACGGCAGATGGAATCCTTGACAACTCTAATTGTTGAAAATGCTGTTGTGAAACATGTGCCCTTTTCAATAGTAAGCTCAAAAAGCATTGGATATCTATTCCTATGTGGGTATGAAGGATTATCGCATGATATTTTACGTCCTATTATTTGGTCCTGGATGTCACCGACAATGAATCCCCTGTCTCGTATTCTTCCGTTATGTGGCATATCAGCATCTCTAGATTCCATGAATATGCAGAATATTGATTTGGGTGACCTAGCACCGATCCTTACCAACCTTTTAAATCTTCGAAGTGTTTTGGTGCAATGTGAAACGGAGTTTCAAATAACTAAAGTAAGGAAATTTTTGAATGACGTACATGGGATACATTTCACTGAGTTAGAAATAGCACCATGTACATTAGAAACTTCAGACAATTCCTTGAGATCTTATTTGATTGGAATGGGAAGCTACCGAGAAGAAGACTTCAATACTCTTAACAAGAGCATATCTAAGGAATTGGGAACTGGTGGATCTTGTTGTGCTTTTCTGCCAAGAGACAATCATCCTTTTTGGTTGGCCCATACGGGCGAGGAACATTCAGTGCATTTCACTGTGCCTCAGGATTGGAACAAGATGGGAATGGTTTTGTGTGTTGTGTATTTATCAAAACCTGAAACCGTGGCAACCGAGTGTCTTATTAGTGTCTTAATGGTTAATTACACAAAGTGTACCATACATATATACAAGCGAGACACAGTAATTTCCTTTAACGATGCAGATTGGCAGAGCATAATATCTCATTTGGAAGCTGGAGACAAGGTGGAGATTTTTCTGTCTTTCAGGAATGAATTGGTGATGAAAAGGGCAGCTGTCTATCTCATGAATTATGAATTCATTGACACGGAAATGAAAGCTGTTAGTAAACCACCTGTTATGCAGATGTATGGTTTGAAGAGGTATCTTAAGGGTCAAGAAAGCAGCCGGAAGAGAAAATGGTAA 3120 0.3933 METESSPPSSKSEWKYDVFINFRGVDTRRKFVSHLHSALSKAGVKTFLDEENLLKGMEQQELLRAIQVSQIAIVVFSKRYAESSWCLDELEKIFECRQTCCQKVLPVFYYVQPSEVREQTGDFGDVLRAAAENRYEDTLLRWSRTLTKAANLAGWDVRKSRSEAELVGDIVKDVINKLDYNVLSITEFPVGLDHRVQEVIRFIERTKNSCRIGIWGMGGSGKTTIAKAIYNKLHRLFENKSFIEDIREVCQTDRRGLVRLQEKLLSDVLKAKVEIQSVGIGQTMIDNRFIGKRALIILDDVNEFDQLEALCGNTQWIGESSVIIITTSDLHLLKRFEVDYVYEMKEMEANESLELFSWHAFREAKPREDFNELAKNAVAYCGGLPLALEVLGSYLRKRTVSEWRSVLSKLKISLNAQVQAKLRISFENLLDQMEKDIFLDVCCVFIGKDRGCVTEVLNGCGLYADIGITVLLERSLIKVEKNNKLIMHPLLRDMGREIIREGSRKEPGKCSRLWFQEDVRDVLTNSTGTDAVEGLALKLNLTNRECFKADAFEEMRSLRLLQLHHVELTGDYGFLSKQLRWIYWQGFPSTYIPNNFYLGDAIAINLKHSNLRQVWKEPKALHMLKFLNLSHSKYLTETPDFSGLPNLEKLVLKYCPSLRCVHKSIGDLSNIVLINLKDCTSLSNLPREIYKLKSLKTLILSGCSKIDKFEEDIRQMESLTTLIVENAVVKHVPFSIVSSKSIGYLFLCGYEGLSHDILRPIIWSWMSPTMNPLSRILPLCGISASLDSMNMQNIDLGDLAPILTNLLNLRSVLVQCETEFQITKVRKFLNDVHGIHFTELEIAPCTLETSDNSLRSYLIGMGSYREEDFNTLNKSISKELGTGGSCCAFLPRDNHPFWLAHTGEEHSVHFTVPQDWNKMGMVLCVVYLSKPETVATECLISVLMVNYTKCTIHIYKRDTVISFNDADWQSIISHLEAGDKVEIFLSFRNELVMKRAAVYLMNYEFIDTEMKAVSKPPVMQMYGLKRYLKGQESSRKRKW* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00299 1039 Pfam NB-ARC domain 195 427 IPR002182 GO:0043531
Phac10g00299 1039 Pfam TIR domain 15 181 IPR000157 GO:0007165
Phac10g00299 1039 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 155 IPR035897 -
Phac10g00299 1039 Gene3D Ribonuclease Inhibitor 535 717 IPR032675 -
Phac10g00299 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 440 IPR027417 -
Phac10g00299 1039 PRINTS Disease resistance protein signature 288 302 - -
Phac10g00299 1039 PRINTS Disease resistance protein signature 690 706 - -
Phac10g00299 1039 PRINTS Disease resistance protein signature 381 395 - -
Phac10g00299 1039 PRINTS Disease resistance protein signature 211 226 - -
Phac10g00299 1039 Gene3D - 347 430 IPR042197 -
Phac10g00299 1039 SMART till_3 15 152 IPR000157 GO:0007165
Phac10g00299 1039 Gene3D - 179 341 IPR027417 -
Phac10g00299 1039 Gene3D - 9 178 IPR035897 -
Phac10g00299 1039 ProSiteProfiles TIR domain profile. 14 178 IPR000157 GO:0007165
Phac10g00299 1039 SUPERFAMILY L domain-like 487 814 - -
Phac10g00299 1039 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 180 - -
Phac10g00299 1039 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 762 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00299 Phac-Chr10 4151166 4155698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00299 8 736 WRKY Transcription Factor Family AT4G12020 29.973 9.84e-81 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00299 - - gmx:100815297 1327.77