Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00296 ATGGGAGGATCGGGTAAAACTACCGTAGCCAAAGCCATCTACAATCGAATTCCTCGTACATTTGGTGATAAAAGTTTCATTCAAGATATTAGACAAGTTTGTGAAACAGATGGCAGAGGCCTTGTTCATTTACAAGAACAACTTCTATCAGATGTCCTAAAAACAAATGTGAAGATAGAGAGTGGTGGGGTGGAAAAAACTATAATCGAGAACAGACTTTCTGAAAAAAAGTTATTCATTGTGCTTGACGATGTGAATGAGATACACCAATTGAAACACCTTTGTGGAAATGGTAAATGGTTTGGTCAAAGAAGTGTAATAATCATTACAACTAGAAATTTAGACCTGCTTTATCAACTTAATGTTGATTATGTTTATGAGATGGATAAAATGGACGAAAATGAATCCCTTGAACTTTTTAGTTGGCATGCTTTTAGAGAAGCAAAACCAAGGGAAGAATTCAATGAACTTGCGAGAGATGCAGTTGCTTATTGTGGTGGACTACCACTCGCTCTTGAAGTCCTTGGTTCTTATTTAAGTAAGAGGTCACAAAATGAATGGAGAAGTGTATTGTCGAAATTAGAAGTAATTCCCAATACTCAAGTTCAGAACAAACTAAGAATAAGCTTTGACTGTTTACGCGAAGACATGGAAAAGGATATATTTCTTGATGTTTGTTGTTTCTTTATTGGTAAAGATAGAGGCTATGTCACAGAGATACTAAATGGATGTGGACTGCATGCTGATATTGGAATAAGAGTTCTCATAGAGCGTGGTCTTATAAAAATTGAAAAGAACAATAAACTTGGAATGCATCATTTGCTCAGGGATATGGGACGAGAGATTGTGCGCCAAAGTTCAACAATGCAACCTGGGAAGCGCACTAGATTGTGGCTTTCCAAGGATGTACTTGATGTATTGACAAAGAATACTGGGACAGAAGCTATTGAGGGATTGTCTCTCAACTGTCAGTCAACAAGCAAGGATTTCGTGGAAGCTTATGCTTTTGACAAAATGAAGAGGTTGAGATTCTTGCAACTTGATCATGTACAAATCACTGGAGATTATGGATATCTTTCTAAGCAACTGAGATGGATCTACTGGCAAGGATTTCCATTAAAGTACATACCTAACAACTTCTATTTGGAAGGTGCAATTGTGATGGATTTCCAACACAGTAATCTCAGACTATTGTGGAAAGAACCCAAGGTTTTGCCGTTGCTAAAAATCCTCAATCTTAGTCATTCCAAGCGCTTGATAAAAACCCCTGACTTTTCAAAATTTCCAATTCTTGAAAAGCTCATTCTCAAGCATTGTCCAAAATTGCGCAAGGTACACCAATCCATTGGAGAGCTCCACAATCTTCTACTAATAAACTTGAAAGGTTGTAAAAACCTAAGAAGTCTCCCACGTGAGGCATATAAGTTGAAATCTTTGAAAACTCTCATCCTGTCTGGTTGTCTGAAGATTGGCATCTTTGAAAAAGATATATTGCTCATGGAATCCCTGACAACTCTAATTTCTGAAAATATTGCTGTGAAACAAGTTCCCATTTCAGTAGTAAGCTCAAAAAGCATTGGATATATACTTCTAGGCGGAAATAAAGGATTATCACTTACTGTTTTTCGTTCTATCATTTGGTCTTGGATGTCACATACTGTTGATCCCCTGTCTCGTATTCGTCCGTTTCGTGGCATTTCATCTTCTCAAGTTTCCATGAATATCAAGAATAATAATTTGGGTGATCTAGCACCAATCCATAGCAGCATTTTCAATCTGCGTACTGTTTTTGTGCAATGTGTCACGGAGTATCAAACATCGGAACAGTTAAGAACAATTTTGGAGGAAGTTCGTGTTGTAAGTTTGAGTACATTGAAAATAAGACCATCTACACCAGAAATTTCAAAGCATCCCTTAAGACCATATTTTATTGAACTTGGAGGTTATCAAGAAGAAGTCTTCAATACTCTCCAAAAGAGTATAGTTGAGGGATTGGAAACCAGCGAGTCTTGTGATGATTTTCTCCCTAGTGACAATTTTCCTTATTGGTTTGCTTATATGGCTGAGGGAGACTCAGTCATTTTCACTGTGCCTGATCAACCTTTTAACATTGATGGAATGATTTTGTGTTCTGTGTATTTATCAACCCTTGAAAACACAACAACTGAATGTCTTGTTAGTGTCTTAGTGGTTAACTACACAAAGTGCACAATCCAGTTATTCAAGGGAGACCCAAAAATTTTCTTTAATGATGTAGATTGGCAGGGCTTGATATCACATTTGGTAGGTGACAAGGTGGGGATTTTTGTTATTTTTGCAGATGGATTTGTAGTCCAGAAGACAGCTGTCTATCTAATGTATAATGTATCAATTGAGAAGGAAATGGGTGTAACGAGCCGTAATGATGCAAAGGTAAAAACGAGTAATGATCTGGAAAAAGTAAAAGTGGGAGGTCACGTCGGACAAATACACGACAAAGATCTTACAGGGTATTTAAGTGACGTGGACTTAGTGGACTCATCTTAA 2526 0.3729 MGGSGKTTVAKAIYNRIPRTFGDKSFIQDIRQVCETDGRGLVHLQEQLLSDVLKTNVKIESGGVEKTIIENRLSEKKLFIVLDDVNEIHQLKHLCGNGKWFGQRSVIIITTRNLDLLYQLNVDYVYEMDKMDENESLELFSWHAFREAKPREEFNELARDAVAYCGGLPLALEVLGSYLSKRSQNEWRSVLSKLEVIPNTQVQNKLRISFDCLREDMEKDIFLDVCCFFIGKDRGYVTEILNGCGLHADIGIRVLIERGLIKIEKNNKLGMHHLLRDMGREIVRQSSTMQPGKRTRLWLSKDVLDVLTKNTGTEAIEGLSLNCQSTSKDFVEAYAFDKMKRLRFLQLDHVQITGDYGYLSKQLRWIYWQGFPLKYIPNNFYLEGAIVMDFQHSNLRLLWKEPKVLPLLKILNLSHSKRLIKTPDFSKFPILEKLILKHCPKLRKVHQSIGELHNLLLINLKGCKNLRSLPREAYKLKSLKTLILSGCLKIGIFEKDILLMESLTTLISENIAVKQVPISVVSSKSIGYILLGGNKGLSLTVFRSIIWSWMSHTVDPLSRIRPFRGISSSQVSMNIKNNNLGDLAPIHSSIFNLRTVFVQCVTEYQTSEQLRTILEEVRVVSLSTLKIRPSTPEISKHPLRPYFIELGGYQEEVFNTLQKSIVEGLETSESCDDFLPSDNFPYWFAYMAEGDSVIFTVPDQPFNIDGMILCSVYLSTLENTTTECLVSVLVVNYTKCTIQLFKGDPKIFFNDVDWQGLISHLVGDKVGIFVIFADGFVVQKTAVYLMYNVSIEKEMGVTSRNDAKVKTSNDLEKVKVGGHVGQIHDKDLTGYLSDVDLVDSS* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00296 841 SUPERFAMILY L domain-like 333 601 - -
Phac10g00296 841 Gene3D Ribonuclease Inhibitor 306 570 IPR032675 -
Phac10g00296 841 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 224 IPR027417 -
Phac10g00296 841 SUPERFAMILY "Winged helix" DNA-binding domain 201 307 IPR036390 -
Phac10g00296 841 PRINTS Disease resistance protein signature 474 490 - -
Phac10g00296 841 PRINTS Disease resistance protein signature 165 179 - -
Phac10g00296 841 PRINTS Disease resistance protein signature 72 86 - -
Phac10g00296 841 Gene3D - 130 214 IPR042197 -
Phac10g00296 841 Gene3D - 1 125 IPR027417 -
Phac10g00296 841 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 503 IPR044974 GO:0006952
Phac10g00296 841 Pfam NB-ARC domain 1 197 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00296 Phac-Chr10 4124783 4128357 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00296 1 494 WRKY Transcription Factor Family AT5G45050 32.500 3.67e-68 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00296 - - vun:114167037 1207.2