Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00290 ATGTACGATGTGGTCATAAACTTTAATGGAGAAGACATCCAAAGGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCTTCACCACTTTCCTTCACCACCCCAATGCACTCAACCCAATTGACACCCAACAACCTATTCTCAATCTGTCTCGTGTAGCAATTGTTGTTTTCACAAAATCCTATTCTCAATCTGCTTGGTGTCTTCATCAACTTCAACAAATCATCAAATGGCACCAAACTTATTACCGTCATGTTCTGCCCGTTTATTACGAAATTGAGCCATCTGATGTACGTCTTCAGATGGGTGATTTTGGAAAAGCCTTCAAAGCAACTGCTCAGCAAACATTCTCAGGACAACAACTGGAGCATGGCATGTCGAGGTGGAGGCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTAAGACCATTCTTAATTTACCACTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGTGTTGAAGATGTGGTTCGAACCATCAAAAATAAATCCACGCAAGTTTTTACCACAGCGATATGTGGAATGGAAGGATCTGGTAAAACCACCATTGCCAAAGCCATCTACCATCAAATTCATGGTTCATTCCAAGAGAAAAGTTTCATCGAAGATATTGCACAAGTTAGTCGAACGAGAGGGGATGTTCATTTACAAGGACAACTTCTTTCAGATGTCTTAAAAACAAAGGTGGAGATAAATAACGTTGAGATGGGAACAAGTATGATTAGGGAAAGACTTGCTGGGAAAAGAGTGCTCATTGTACTCGACGATGTGAATCTCTATTGTCCCTTATTATTAGACCTATGGGAAAGTCTTGCATGGTTCGGTGAAGGAACTGTAATAATCATTACAACCATAGATGAAGACCTACTCAGGATACATGAAGTTGATTCTGTTTTTCGTACAAAGCTAATGAACGCAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAACAAGAATATCATTTCCTTGCAGAAAGAGTAGTTGCTTATTGTGGAGGACTATCTCTAGCTCTTGAAGTCATTGGAACTTATTTACATGAAAGGACGAAAAAAGAATGGACTGCAGTATTGTTACGATTAGACAATATTTCCCAGCATGATCTTCAACGGAAATTGAAAATAAGCTTCGACGGTTTACGCAATGAAATTGTAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAAGGCAGAGCTTATGTTACCAAGATCCTAAGTGGGTGTGGAGCAGACGTTGATAGTGGAATAAGACTTCTCATAGAGCGTAGCCTCATACAAGTTAAAAACAACAACAAATTAGGAATGCATTCTTTGCTACGAGAAATGGGAAGAGAAATTATTCGTGAAATTTCAAGAAAGGATTCTGGGAAGAACAGTCGACGCTGGATTGAGGAGGATGCGGGATATGTATTGACAGATACCACAGGTACAGAAGCCATTGACGGATTGTTTGTGAAACTGCGTTCTGCCAAATCAAGACTGCTGCGACAAGATCAAATACAACTTGCTGGAAATTATGTTCATCGTTATAAGAATCTGAGATGGATCAGTTTGCACGGGTTTTCTTCAGAATACCTACCTAACCACTTTTATCTGCATGATGCAATAGCCATTGATTTAAAACACAGTCTTCTTCAATTCGTCTGGAAAGAAGCCAAGGTTTTGAGGTGGCTAAAAGTCCTTAATCTTAGTCACTCCGTGTACTTGACTGAAACCCCTGACTTTTCCGGATTAACAAGTCTTGAACAGATCATTCTGAAAGATTGTCCAAGATTGCGTGAAGTACACCAATCTATTGGATGTCTCTGCAATCTTATACTGCTAAATTTGAAGGACTGTACAAGTCTAAGCACTCTCCCCAGAGAGATATATAAGTTGAAATCTTTAAATACTCTCATCCTCTCCGGTTGTTCCAAGATTGAAATATTAGAAAAAGATATAGTGCAAATGGAATCCTTGATAACACTAATTTCTGAAAATATAACTGTTAAACAAGTGCCTTTTTCAATTGTAAGCTCAAAATGCATTGGATATATATCTCCACGTGGATTTGAAGGATTGTCACATAATATTTTCTCTTCTATCATTCGGTCTTGGATGTCACCAACTATTAATCCCCTATCTGATATTCATTTTTGCACGGATATGGAAGATAATAGTTGGGATGATATTGCGCCATTGCTTAGCAGCCTTGCAAATCTTCGAAGTGTTTTGGTGCAATGTGACTCTCAGTTTCAACTATCTAAGCAAGTAGAAACTATTCTGATCGATTATGGTCTAAATACTACAGAATCAGGAATGTCAAAGGATCACTTCAGATCTTCTTTGATTGGCCTTGGAAGATACAATGAATTCTTGAATACTGTCAGCAATAGCATATCTGAGGCTTTGGGAAGCAGTGAGTCTAGTGAAGTTTCTCTCCCGGGTGACAACGATCCTTATTGGTTGAGCCATAAGGGTGAGGGACATTCTGTTTCTTTCACTGTAGCTCGAGATCGTGACATGAAGGGAATGGCTTTGTGGGTTGCTTATTTATCAAATTCTGAAATCATTGAACCTGAATGTCTTGCTAGTGTCTTAATGGTTAATTACACAAAGTGCACATGCCTGATACACAACCGAAGGACGGTAATTTCCTTTAATGATGAAGATTGGCATGGCATAATGTCAAATTTAGGATATGGAGACAAGGTAGAGATTTTTGTGACTTTTGGTTATGGATCGGTGGTGAAGAACACAGCTCTCTATTTGATATATGGTGAAACAAATGACTTTGAAAGAGAGCCCGCCAAAGAAAAATTCCCTCATTAG 2925 0.3897 MYDVVINFNGEDIQRKFVSHLDSALSAVGFTTFLHHPNALNPIDTQQPILNLSRVAIVVFTKSYSQSAWCLHQLQQIIKWHQTYYRHVLPVYYEIEPSDVRLQMGDFGKAFKATAQQTFSGQQLEHGMSRWRHALTKAANFFGWDESNYRSDAELVDKIVKTILNLPLLSATKFPVGLQSRVEDVVRTIKNKSTQVFTTAICGMEGSGKTTIAKAIYHQIHGSFQEKSFIEDIAQVSRTRGDVHLQGQLLSDVLKTKVEINNVEMGTSMIRERLAGKRVLIVLDDVNLYCPLLLDLWESLAWFGEGTVIIITTIDEDLLRIHEVDSVFRTKLMNANESLELLSWHAFREAKPKQEYHFLAERVVAYCGGLSLALEVIGTYLHERTKKEWTAVLLRLDNISQHDLQRKLKISFDGLRNEIVKDLFLDVCCFFVGKGRAYVTKILSGCGADVDSGIRLLIERSLIQVKNNNKLGMHSLLREMGREIIREISRKDSGKNSRRWIEEDAGYVLTDTTGTEAIDGLFVKLRSAKSRLLRQDQIQLAGNYVHRYKNLRWISLHGFSSEYLPNHFYLHDAIAIDLKHSLLQFVWKEAKVLRWLKVLNLSHSVYLTETPDFSGLTSLEQIILKDCPRLREVHQSIGCLCNLILLNLKDCTSLSTLPREIYKLKSLNTLILSGCSKIEILEKDIVQMESLITLISENITVKQVPFSIVSSKCIGYISPRGFEGLSHNIFSSIIRSWMSPTINPLSDIHFCTDMEDNSWDDIAPLLSSLANLRSVLVQCDSQFQLSKQVETILIDYGLNTTESGMSKDHFRSSLIGLGRYNEFLNTVSNSISEALGSSESSEVSLPGDNDPYWLSHKGEGHSVSFTVARDRDMKGMALWVAYLSNSEIIEPECLASVLMVNYTKCTCLIHNRRTVISFNDEDWHGIMSNLGYGDKVEIFVTFGYGSVVKNTALYLIYGETNDFEREPAKEKFPH* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00290 974 SMART AAA_5 195 334 IPR003593 GO:0016887
Phac10g00290 974 ProSiteProfiles TIR domain profile. 1 167 IPR000157 GO:0007165
Phac10g00290 974 Pfam NB-ARC domain 181 399 IPR002182 GO:0043531
Phac10g00290 974 SMART till_3 1 141 IPR000157 GO:0007165
Phac10g00290 974 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 703 IPR044974 GO:0006952
Phac10g00290 974 SUPERFAMILY L domain-like 473 774 - -
Phac10g00290 974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 426 IPR027417 -
Phac10g00290 974 Pfam TIR domain 2 173 IPR000157 GO:0007165
Phac10g00290 974 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 144 IPR035897 -
Phac10g00290 974 Gene3D - 1 163 IPR035897 -
Phac10g00290 974 Gene3D Ribonuclease Inhibitor 533 705 IPR032675 -
Phac10g00290 974 PRINTS Disease resistance protein signature 273 287 - -
Phac10g00290 974 PRINTS Disease resistance protein signature 198 213 - -
Phac10g00290 974 PRINTS Disease resistance protein signature 662 678 - -
Phac10g00290 974 PRINTS Disease resistance protein signature 367 381 - -
Phac10g00290 974 Gene3D - 333 416 IPR042197 -
Phac10g00290 974 Gene3D - 164 327 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00290 Phac-Chr10 4086704 4090769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00290 2 678 WRKY Transcription Factor Family AT4G12020 28.591 4.01e-64 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00290 - - vun:114165123 1261.51