Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00288 ATGTTCTTCCTGTTTATTACGAAATTGAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAATGCCTTCAAAGCAACTGCACACCAAACGTTTTCAGGACGAGAACTGGAGGATGGTATGTCTAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGAATGAAAGCAATTACAGTTTGTACCATAGCGATATGTGGAATTGATGGATCTGGTAAAACCACCCTTGCCAAAGCCATCTACCGTCAAATTCATGGTTCATTCACGGAGAAAAGTTTCATCGAAGATATTGCACAAGTTAGTCGAACGAGAGGGGATGTCCATTTACAAGGACAACTTCTTTCAGATGTCCTGAAAACAAAGGTGGAGATAGATAGCGTTGAGATGGGAACAAGTATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGCTCATTGTACTTGACGAAGTGGATCCCTATTGTCCATTATTATTAGACCTATGGGAAAGTCGAGCATGGTTCGGTGAAGGAACTGTAATAATCATTACAACCAGAAATGAAGGCCTACTGAACATACATCAAGTTGATTCTGTTTTTCGTATAAAGATGAACGAAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAACAAGAATACTATAACCTTGCAAGAAGAGTAGTTGCTTATTGTGGAGAACTACCTCTTGCTCTTGAAGTCATTGGAACTTATTTATATGAAAGGACGGAAAAAGAATGGATCATAGTATTGTCAAGATTAGAGAAAATTCCCCGGTATGAATCTAGACGGATATTGAAAATAAGCTTCGATGGTTTAGAACAAATGGAAAAAGATTTATTCGTTGATGTATGTTGTTTCTTTGTTGGCAAAGACAGAAACTATGTTACCAATATCCTAAATGACCGTGGAGTAGACGCTGATAGTGGAATAAGAGTTCTCATAGAGCGTAGTCTCATACAAGTTAAAAAGAGCAACAAATTGGGAATACATCCTTTGCTACGAGAATTGGGAATTGAAATTTCAAGATACAAATTTTATGAGGATGGGGAATATGTATTGACAGATAATACAGGGACAGAAGCCATTGACGGATTGTTTGTTAAACTGCGTTCATCCAGAAGAGATTACTCCGAAGCTTATCCTTTAGAGATAAGAGACAGATCAACACTGCTGCAACCAGATCAAATACAAACTGGAAATTATGAGTATAGTTCTAAGAATCTGAGATGGATGAGTTTGCACGGGTTTCATTCAGAATACCTACCTAACGACTTTTATCTGCATGATGCAATAGCGATCGATTTAAAACACAGTCTTCTTCGGTTCGTCTGGAAAGAACCCAAGGTTTTGAGGTGGCTAAAAGTTCTTAATCTTAGTCACTCTGTGTACTTGACAGAAACCCCTGACTTTTCCACACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAGGATTGGTCGAAGTACACCCATCTATTGGATGTCTCTGCTATCTTAGATTGCTAAATTTGAAGAACTGTACAAGTCTAAGCAATCTCCCCAGAGAGATATATAAGTTAGAATCTTTAAATACTCTCATTCTCTCTGGCTGTTCGAAAATTGACCTATTGGAAAAAGATATAGTGCAAATGGAAACCTTGATAACACTAATGGCTGAAAACACAGCTGTGAAACAAGTTCCTTTTTCAATTGTAAGCTCAAAAAGCATTGGATATATTTCCCTACGTGGATTTAAGGGATTGTCTCGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAACAATGAATCCCTTATCTTATATTCATTCATTTTGCACGGATATGGAGGATAATAATTGGGGTTATATTGCGCCATTGCTTAGCACCCTTCCAAATCTTCGAAGTGTTTTGGTGCAATGTGACTCTGAGTTTCAACTATATAAGCAAGTAGAAACCATTCTGGTCGAATATGGTCTAAATACTACAGAATCAGGAATTTTGAAGCATCACTTCAGGTCTTCTTTGATTGGTGTTGGAACATACAATGAATTCTTCAATACTGTCAGTAATAACATATCTGAGACATTGGGAAGGAGTGAGTCTAGTGATGTTGCTCTCCCGGGTGACAATGATCCTTATTGGTTGAGCCATAAGGGTGATGGACATTCTGTTTCTTTCACTGTAGCTCAAGATCGTGACATGAAGGGAATGGCTTTGTGGGTTGCTTATTTATCAAATCAAGAAATCATTGAACCTGAATGTCTTGCGAGTGTCTTAATTGTTAATTACACAAAGTGCACATGCCAGATACACAACCGAGGGACGGTAGTTTCCTTTAATGATGAAGATTGGCATGGCATAATGTCAAATTTAGGATATGGAGACAAGGTGGAGATTTTTGTGAGTTTTGGTCATGGATTGGTAGTCAAGAACACAGCTCTCTATTTGATATATGGGGAATCAAATGACTTTGAAAGAGAGCCCACCAAAGAAAAATTCCCCCATTAG 2529 0.3863 MFFLFITKLSHLMYVFRRVILEMPSKQLHTKRFQDENWRMVCLGGATHSPKLQISLDGMKAITVCTIAICGIDGSGKTTLAKAIYRQIHGSFTEKSFIEDIAQVSRTRGDVHLQGQLLSDVLKTKVEIDSVEMGTSMIRERLSGKRVLIVLDEVDPYCPLLLDLWESRAWFGEGTVIIITTRNEGLLNIHQVDSVFRIKMNENESLELLSWHAFREPKPKQEYYNLARRVVAYCGELPLALEVIGTYLYERTEKEWIIVLSRLEKIPRYESRRILKISFDGLEQMEKDLFVDVCCFFVGKDRNYVTNILNDRGVDADSGIRVLIERSLIQVKKSNKLGIHPLLRELGIEISRYKFYEDGEYVLTDNTGTEAIDGLFVKLRSSRRDYSEAYPLEIRDRSTLLQPDQIQTGNYEYSSKNLRWMSLHGFHSEYLPNDFYLHDAIAIDLKHSLLRFVWKEPKVLRWLKVLNLSHSVYLTETPDFSTLPSLEQLILKDCPGLVEVHPSIGCLCYLRLLNLKNCTSLSNLPREIYKLESLNTLILSGCSKIDLLEKDIVQMETLITLMAENTAVKQVPFSIVSSKSIGYISLRGFKGLSRNLFPSIIRSWMSPTMNPLSYIHSFCTDMEDNNWGYIAPLLSTLPNLRSVLVQCDSEFQLYKQVETILVEYGLNTTESGILKHHFRSSLIGVGTYNEFFNTVSNNISETLGRSESSDVALPGDNDPYWLSHKGDGHSVSFTVAQDRDMKGMALWVAYLSNQEIIEPECLASVLIVNYTKCTCQIHNRGTVVSFNDEDWHGIMSNLGYGDKVEIFVSFGHGLVVKNTALYLIYGESNDFEREPTKEKFPH* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00288 842 SUPERFAMILY "Winged helix" DNA-binding domain 273 353 IPR036390 -
Phac10g00288 842 SUPERFAMILY L domain-like 414 643 - -
Phac10g00288 842 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 59 564 IPR044974 GO:0006952
Phac10g00288 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 292 IPR027417 -
Phac10g00288 842 Gene3D - 39 195 IPR027417 -
Phac10g00288 842 Gene3D Ribonuclease Inhibitor 398 666 IPR032675 -
Phac10g00288 842 Pfam NB-ARC domain 51 267 IPR002182 GO:0043531
Phac10g00288 842 Gene3D - 199 283 IPR042197 -
Phac10g00288 842 PRINTS Disease resistance protein signature 529 545 - -
Phac10g00288 842 PRINTS Disease resistance protein signature 66 81 - -
Phac10g00288 842 PRINTS Disease resistance protein signature 141 155 - -
Phac10g00288 842 PRINTS Disease resistance protein signature 234 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00288 Phac-Chr10 4071775 4075776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00288 60 547 WRKY Transcription Factor Family AT5G45050 28.113 4.30e-49 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00288 - - vun:114165123 967.992