Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00287 ATGTTCTTCCTGTTTATTACGAAATTGAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAATGCCTTCAAAGCAACTGCACACCAAACGTTTTCAGGACGAGAACTGGAGGATGGTATGTCTAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGAATGAAAGCAATTACAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGTGTGGAGGATGTGATTCAAACCATAAAAAATAAATCCACGCAAGTTTGTACCATAGCGATATGTGGAATTGATGGATCTGGTAAAACCACCCTTGCCAAAGCCATCTACCGTCAAATTCATGGTTCATTCACGGAGAAAAGTTTCATCGAAGATATTGCACAAGTTAGTCGAACGAGAGGGGATGTCCATTTACAAGGACAACTTCTTTCAGATGTCCTGAAAACAAAGGTGGAGATAGATAGCGTTGAGATGGGAACAAGTATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGCTCATTGTACTTGACGAAGTGGATCCCTATTGTCCATTATTATTAGACCTATGGGAAAGTCGAGCATGGTTCGGTGAAGGAACTGTAATAATCATTACAACCAGAAATGAAGGCCTACTGAACATACATCAAGTTGATTCTGTTTTTCGTATAAAGATGAACGAAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAACAAGAATACTATAACCTTGCAAGAAGAGTAGTTGCTTATTGTGGAGAACTACCTCTTGCTCTTGAAGTCATTGGAACTTATTTATATGAAAGGACGGAAAAAGAATGGATCATAGTATTGTCAAGATTAGAGAAAATTCCCCGGTATGAATCTAGACGGATATTGAAAATAAGCTTCGATGGTTTAGAACAAATGGAAAAAGATTTATTCGTTGATGTATGTTGTTTCTTTGTTGGCAAAGACAGAAACTATGTTACCAATATCCTAAATGACCGTGGAGTAGACGCTGATAGTGGAATAAGAGTTCTCATAGAGCGTAGTCTCATACAAGTTAAAAAGAGCAACAAATTGGGAATACATCCTTTGCTACGAGAATTGGGAATTGAAATTTCAAGATACAAATTTTATGAGGATGGGGAATATGTATTGACAGATAATACAGGGACAGAAGCCATTGACGGATTGTTTGTTAAACTGCGTTCATCCAGAAGAGATTACTCCGAAGCTTATCCTTTAGAGATAAGAGACAGATCAACACTGCTGCAACCAGATCAAATACAAACTGGAAATTATGAGTATAGTTCTAAGAATCTGAGATGGATGAGTTTGCACGGGTTTCATTCAGAATACCTACCTAACGACTTTTATCTGCATGATGCAATAGCGATCGATTTAAAACACAGTCTTCTTCGGTTCGTCTGGAAAGAACCCAAGGTTTTGAGGTGGCTAAAAGTTCTTAATCTTAGTCACTCTGTGTACTTGACAGAAACCCCTGACTTTTCCACACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAGGATTGGTCGAAGTACACCCATCTATTGGATGTCTCTGCTATCTTAGATTGCTAAATTTGAAGAACTGTACAAGTCTAAGCAATCTCCCCAGAGAGATATATAAGTTAGAATCTTTAAATACTCTCATTCTCTCTGGCTGTTCGAAAATTGACCTATTGGAAAAAGATATAGTGCAAATGGAAACCTTGATAACACTAATGGCTGAAAACACAGCTGTGAAACAAGTTCCTTTTTCAATTGTAAGCTCAAAAAGCATTGGATATATTTCCCTACGTGGATTTAAGGGATTGTCTCGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAACAATGAATCCCTTATCTTATATTCATTCATTTTGCACGGATATGGAGGATAATAATTGGGGTTATATTGCGCCATTGCTTAGCACCCTTCCAAATCTTCGAAGTGTTTTGGTGCAATGTGACTCTGAGTTTCAACTATATAAGCAAGTAGAAACCATTCTGGTCGAATATGGTCTAAATACTACAGAATCAGGAATTTTGAAGCATCACTTCAGGTCTTCTTTGATTGGTGTTGGAACATACAATGAATTCTTCAATACTGTCAGTAATAACATATCTGAGACATTGGGAAGGAGTGAGTCTAGTGATGTTGCTCTCCCGGGTGACAATGATCCTTATTGGTTGAGCCATAAGGGTGATGGACATTCTGTTTCTTTCACTGTAGCTCAAGATCGTGACATGAAGGGAATGGCTTTGTGGGTTGCTTATTTATCAAATCAAGAAATCATTGAACCTGAATGTCTTGCGAGTGTCTTAATTGTTAATTACACAAAGTGCACATGCCAGATACACAACCGAGGGACGGTAGTTTCCTTTAATGATGAAGATTGGCATGGCATAATGTCAAATTTAGGATATGGAGACAAGGTGGAGATTTTTGTGAGTTTTGGTCATGGATTGGTAGTCAAGAACACAGCTCTCTATTTGATATATGGGGAATCAAATGACTTTGAAAGAGAGCCCACCAAAGAAAAATTCCCCCATTAG 2613 0.3861 MFFLFITKLSHLMYVFRRVILEMPSKQLHTKRFQDENWRMVCLGGATHSPKLQISLDGMKAITVLSATKFPVGLQSRVEDVIQTIKNKSTQVCTIAICGIDGSGKTTLAKAIYRQIHGSFTEKSFIEDIAQVSRTRGDVHLQGQLLSDVLKTKVEIDSVEMGTSMIRERLSGKRVLIVLDEVDPYCPLLLDLWESRAWFGEGTVIIITTRNEGLLNIHQVDSVFRIKMNENESLELLSWHAFREPKPKQEYYNLARRVVAYCGELPLALEVIGTYLYERTEKEWIIVLSRLEKIPRYESRRILKISFDGLEQMEKDLFVDVCCFFVGKDRNYVTNILNDRGVDADSGIRVLIERSLIQVKKSNKLGIHPLLRELGIEISRYKFYEDGEYVLTDNTGTEAIDGLFVKLRSSRRDYSEAYPLEIRDRSTLLQPDQIQTGNYEYSSKNLRWMSLHGFHSEYLPNDFYLHDAIAIDLKHSLLRFVWKEPKVLRWLKVLNLSHSVYLTETPDFSTLPSLEQLILKDCPGLVEVHPSIGCLCYLRLLNLKNCTSLSNLPREIYKLESLNTLILSGCSKIDLLEKDIVQMETLITLMAENTAVKQVPFSIVSSKSIGYISLRGFKGLSRNLFPSIIRSWMSPTMNPLSYIHSFCTDMEDNNWGYIAPLLSTLPNLRSVLVQCDSEFQLYKQVETILVEYGLNTTESGILKHHFRSSLIGVGTYNEFFNTVSNNISETLGRSESSDVALPGDNDPYWLSHKGDGHSVSFTVAQDRDMKGMALWVAYLSNQEIIEPECLASVLIVNYTKCTCQIHNRGTVVSFNDEDWHGIMSNLGYGDKVEIFVSFGHGLVVKNTALYLIYGESNDFEREPTKEKFPH* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00287 870 SUPERFAMILY "Winged helix" DNA-binding domain 301 381 IPR036390 -
Phac10g00287 870 Gene3D Ribonuclease Inhibitor 426 694 IPR032675 -
Phac10g00287 870 Pfam NB-ARC domain 76 295 IPR002182 GO:0043531
Phac10g00287 870 PRINTS Disease resistance protein signature 94 109 - -
Phac10g00287 870 PRINTS Disease resistance protein signature 262 276 - -
Phac10g00287 870 PRINTS Disease resistance protein signature 169 183 - -
Phac10g00287 870 PRINTS Disease resistance protein signature 557 573 - -
Phac10g00287 870 Gene3D - 58 223 IPR027417 -
Phac10g00287 870 Gene3D - 227 311 IPR042197 -
Phac10g00287 870 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 65 593 IPR044974 GO:0006952
Phac10g00287 870 SUPERFAMILY L domain-like 442 671 - -
Phac10g00287 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 320 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00287 Phac-Chr10 4071775 4075776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00287 72 575 WRKY Transcription Factor Family AT5G45050 27.839 8.52e-51 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00287 - - vun:114165123 1005.36