Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00286 ATGGGAACAAGTATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGCTCATTGTACTTGACGAAGTGGATCCCTATTGTCCATTATTATTAGACCTATGGGAAAGTCGAGCATGGTTCGGTGAAGGAACTGTAATAATCATTACAACCAGAAATGAAGGCCTACTGAACATACATCAAGTTGATTCTGTTTTTCGTATAAAGATGAACGAAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAACCAAAACCAAAACAAGAATACTATAACCTTGCAAGAAGAGTAGTTGCTTATTGTGGAGAACTACCTCTTGCTCTTGAAGTCATTGGAACTTATTTATATGAAAGGACGGAAAAAGAATGGATCATAGTATTGTCAAGATTAGAGAAAATTCCCCGGTATGAATCTAGACGGATATTGAAAATAAGCTTCGATGGTTTAGAACAAATGGAAAAAGATTTATTCGTTGATGTATGTTGTTTCTTTGTTGGCAAAGACAGAAACTATGTTACCAATATCCTAAATGACCGTGGAGTAGACGCTGATAGTGGAATAAGAGTTCTCATAGAGCGTAGTCTCATACAAGTTAAAAAGAGCAACAAATTGGGAATACATCCTTTGCTACGAGAATTGGGAATTGAAATTTCAAGATACAAATTTTATGAGGATGGGGAATATGTATTGACAGATAATACAGGGACAGAAGCCATTGACGGATTGTTTGTTAAACTGCGTTCATCCAGAAGAGATTACTCCGAAGCTTATCCTTTAGAGATAAGAGACAGATCAACACTGCTGCAACCAGATCAAATACAAACTGGAAATTATGAGTATAGTTCTAAGAATCTGAGATGGATGAGTTTGCACGGGTTTCATTCAGAATACCTACCTAACGACTTTTATCTGCATGATGCAATAGCGATCGATTTAAAACACAGTCTTCTTCGGTTCGTCTGGAAAGAACCCAAGGTTTTGAGGTGGCTAAAAGTTCTTAATCTTAGTCACTCTGTGTACTTGACAGAAACCCCTGACTTTTCCACACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAGGATTGGTCGAAGTACACCCATCTATTGGATGTCTCTGCTATCTTAGATTGCTAAATTTGAAGAACTGTACAAGTCTAAGCAATCTCCCCAGAGAGATATATAAGTTAGAATCTTTAAATACTCTCATTCTCTCTGGCTGTTCGAAAATTGACCTATTGGAAAAAGATATAGTGCAAATGGAAACCTTGATAACACTAATGGCTGAAAACACAGCTGTGAAACAAGTTCCTTTTTCAATTGTAAGCTCAAAAAGCATTGGATATATTTCCCTACGTGGATTTAAGGGATTGTCTCGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAACAATGAATCCCTTATCTTATATTCATTCATTTTGCACGGATATGGAGGATAATAATTGGGGTTATATTGCGCCATTGCTTAGCACCCTTCCAAATCTTCGAAGTGTTTTGGTGCAATGTGACTCTGAGTTTCAACTATATAAGCAAGTAGAAACCATTCTGGTCGAATATGGTCTAAATACTACAGAATCAGGAATTTTGAAGCATCACTTCAGGTCTTCTTTGATTGGTGTTGGAACATACAATGAATTCTTCAATACTGTCAGTAATAACATATCTGAGACATTGGGAAGGAGTGAGTCTAGTGATGTTGCTCTCCCGGGTGACAATGATCCTTATTGGTTGAGCCATAAGGGTGATGGACATTCTGTTTCTTTCACTGTAGCTCAAGATCGTGACATGAAGGGAATGGCTTTGTGGGTTGCTTATTTATCAAATCAAGAAATCATTGAACCTGAATGTCTTGCGAGTGTCTTAATTGTTAATTACACAAAGTGCACATGCCAGATACACAACCGAGGGACGGTAGTTTCCTTTAATGATGAAGATTGGCATGGCATAATGTCAAATTTAGGATATGGAGACAAGGTGGAGATTTTTGTGAGTTTTGGTCATGGATTGGTAGTCAAGAACACAGCTCTCTATTTGATATATGGGGAATCAAATGACTTTGAAAGAGAGCCCACCAAAGAAAAATTCCCCCATTAG 2133 0.3793 MGTSMIRERLSGKRVLIVLDEVDPYCPLLLDLWESRAWFGEGTVIIITTRNEGLLNIHQVDSVFRIKMNENESLELLSWHAFREPKPKQEYYNLARRVVAYCGELPLALEVIGTYLYERTEKEWIIVLSRLEKIPRYESRRILKISFDGLEQMEKDLFVDVCCFFVGKDRNYVTNILNDRGVDADSGIRVLIERSLIQVKKSNKLGIHPLLRELGIEISRYKFYEDGEYVLTDNTGTEAIDGLFVKLRSSRRDYSEAYPLEIRDRSTLLQPDQIQTGNYEYSSKNLRWMSLHGFHSEYLPNDFYLHDAIAIDLKHSLLRFVWKEPKVLRWLKVLNLSHSVYLTETPDFSTLPSLEQLILKDCPGLVEVHPSIGCLCYLRLLNLKNCTSLSNLPREIYKLESLNTLILSGCSKIDLLEKDIVQMETLITLMAENTAVKQVPFSIVSSKSIGYISLRGFKGLSRNLFPSIIRSWMSPTMNPLSYIHSFCTDMEDNNWGYIAPLLSTLPNLRSVLVQCDSEFQLYKQVETILVEYGLNTTESGILKHHFRSSLIGVGTYNEFFNTVSNNISETLGRSESSDVALPGDNDPYWLSHKGDGHSVSFTVAQDRDMKGMALWVAYLSNQEIIEPECLASVLIVNYTKCTCQIHNRGTVVSFNDEDWHGIMSNLGYGDKVEIFVSFGHGLVVKNTALYLIYGESNDFEREPTKEKFPH* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00286 710 PRINTS Disease resistance protein signature 9 23 - -
Phac10g00286 710 PRINTS Disease resistance protein signature 102 116 - -
Phac10g00286 710 PRINTS Disease resistance protein signature 397 413 - -
Phac10g00286 710 SUPERFAMILY "Winged helix" DNA-binding domain 141 221 IPR036390 -
Phac10g00286 710 Gene3D - 67 151 IPR042197 -
Phac10g00286 710 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 432 IPR044974 GO:0006952
Phac10g00286 710 SUPERFAMILY L domain-like 282 511 - -
Phac10g00286 710 Gene3D - 2 63 IPR027417 -
Phac10g00286 710 Gene3D Ribonuclease Inhibitor 266 534 IPR032675 -
Phac10g00286 710 Pfam NB-ARC domain 4 135 IPR002182 GO:0043531
Phac10g00286 710 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 160 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00286 Phac-Chr10 4071775 4075844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00286 4 415 WRKY Transcription Factor Family AT5G45050 27.753 1.97e-39 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00286 - - vun:114165123 881.322