Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00272 ATGTCTCTTCCAAGATCACGAACTGAAGAGAAACCCCTTTCTCAGCTTACAGAAGGAGCACCACCACCATCATCAGCACCACCACCACCTTCATCCTCTTCTTCATGGAATCGCCTACACAACTTCCCTCCTTTAAATCTTCACAACAAGACTAGCAAAATTGACAGTGATGAAGATATGTTCACAGTTCCAGATGTGGAAACCACAGCCATTAGTGTTCATTCTGCGTTGACTCTACAAAATAGTAACCTTAATCAACGTAATGTGACAGACCCTCAATTTCAAACGGGTTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCTGATAAGGAACATAGACGTCTCAAGAGGTTGTTAAGAAATAGAGTTTCTGCTCAACAAGCCCGTGAAAGAAAGAAGGTTTATGTGAATGATTTGGAAGCAAGAGGCAAAGAGTTGCAAGATAAAAATGCTATCTTAGAAGAACGTATCTCTACTTTGATCAATGAGAACACCATGCTTAGGAAGGTTCTTATGAATGCAAGGCCAAAAGTAGACGATAACAATGAACAAAAGCAAGATCAGTTAAGTGAGAGCTAA 582 0.4141 MSLPRSRTEEKPLSQLTEGAPPPSSAPPPPSSSSSWNRLHNFPPLNLHNKTSKIDSDEDMFTVPDVETTAISVHSALTLQNSNLNQRNVTDPQFQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLEARGKELQDKNAILEERISTLINENTMLRKVLMNARPKVDDNNEQKQDQLSES* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00272 193 Gene3D Single helix bin 133 174 - -
Phac10g00272 193 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 112 175 IPR004827 GO:0003700|GO:0006355
Phac10g00272 193 MobiDBLite consensus disorder prediction 1 42 - -
Phac10g00272 193 Pfam bZIP transcription factor 111 170 IPR004827 GO:0003700|GO:0006355
Phac10g00272 193 CDD bZIP_HY5-like 124 165 - -
Phac10g00272 193 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 117 132 IPR004827 GO:0003700|GO:0006355
Phac10g00272 193 SMART brlzneu 110 174 IPR004827 GO:0003700|GO:0006355
Phac10g00272 193 MobiDBLite consensus disorder prediction 83 112 - -
Phac10g00272 193 FunFam Transcription factor HY5 133 174 - -
Phac10g00272 193 Coils Coil 137 164 - -
Phac10g00272 193 SUPERFAMILY Leucine zipper domain 114 173 IPR046347 GO:0003700|GO:0006355
Phac10g00272 193 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 25 188 IPR044280 GO:0000981|GO:0045944
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00272 Phac-Chr10 3937949 3941820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00272 93 182 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 74.725 7.12e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac10g00272 bZIP_1 7.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00272 K16241 - gmx:778143 299.286