Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00271 ATGTCTCTTCCAAGATCACGAACTGAAGAGAAACCCCTTTCTCAGCTTACAGAAGGAGCACCACCACCATCATCAGCACCACCACCACCTTCATCCTCTTCTTCATGGAATCGCCTACACAACTTCCCTCCTTTAAATCTTCACAACAAGACTAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCAGATGTGGAAACCACAGCCATTAGTGTTCATTCTGCGTTGACTCTACAAAATAGTAACCTTAATCAACGTAATGTGACAGACCCTCAATTTCAAACGGGTTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCTGATAAGGAACATAGACGTCTCAAGAGGTTGTTAAGAAATAGAGTTTCTGCTCAACAAGCCCGTGAAAGAAAGAAGGTTTATGTGAATGATTTGGAAGCAAGAGGCAAAGAGTTGCAAGATAAAAATGCTATCTTAGAAGAACGTATCTCTACTTTGATCAATGAGAACACCATGCTTAGGAAGGTTCTTATGAATGCAAGGCCAAAAGTAGACGATAACAATGAACAAAAGCAAGATCAGTTAAGTGAGAGCTAA 585 0.4137 MSLPRSRTEEKPLSQLTEGAPPPSSAPPPPSSSSSWNRLHNFPPLNLHNKTSKIEDSDEDMFTVPDVETTAISVHSALTLQNSNLNQRNVTDPQFQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLEARGKELQDKNAILEERISTLINENTMLRKVLMNARPKVDDNNEQKQDQLSES* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00271 194 Pfam bZIP transcription factor 112 171 IPR004827 GO:0003700|GO:0006355
Phac10g00271 194 SMART brlzneu 111 175 IPR004827 GO:0003700|GO:0006355
Phac10g00271 194 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 25 189 IPR044280 GO:0000981|GO:0045944
Phac10g00271 194 MobiDBLite consensus disorder prediction 88 113 - -
Phac10g00271 194 CDD bZIP_HY5-like 125 166 - -
Phac10g00271 194 MobiDBLite consensus disorder prediction 1 53 - -
Phac10g00271 194 MobiDBLite consensus disorder prediction 31 50 - -
Phac10g00271 194 Gene3D Single helix bin 134 175 - -
Phac10g00271 194 Coils Coil 138 165 - -
Phac10g00271 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 118 133 IPR004827 GO:0003700|GO:0006355
Phac10g00271 194 FunFam Transcription factor HY5 134 175 - -
Phac10g00271 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 113 176 IPR004827 GO:0003700|GO:0006355
Phac10g00271 194 SUPERFAMILY Leucine zipper domain 115 174 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00271 Phac-Chr10 3937949 3941820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00271 94 183 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 74.725 7.44e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac10g00271 bZIP_1 7.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00271 K16241 - gmx:778143 305.834