Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00270 ATGTTCTCTAAATACAGTACTGGTTTCTTGAGTCTTTCTTGTGGTGGAAGAACCAGTTTCAGGGATTCATCTAACATTTCTTGGGTACCAGACACCACCTACGTAACTACAGGCAAGACTACCACCATCACATACAGTGAAGATTCCTCTTCACTGAACATCTCAGCTCGGTTCTTCCCAAATTCGGGAAGGCGAAAATGTTACAGAATACCAGCAAACAATTCAACCACTTTGGTTCTTGTTAGAGCAAAATTTGTGTACAAGAACTATGATGGACTTGGGAAACCCCCTAAGTTCTATGTTTCAATTGGGACATCTATTGCTTCCACCATTAATCTTGCTGAAGATGATCCATGGAGTGAAGAGTTTCTATGGACAGTCAACATGGATACACTGCCATTCTGCTTAATTCCAATGCCTAAAGGGGGTTCACCTGTAATTTCTTCTCTTGAAATCAGACCACTTCCTCAGGGAGCCTACACAAATGGCATGAAAGATTTTCCTAACAAGTTGCTTAGGAAGAGTTATAGAATTGATTGTGGACACTCAAATGATTCTATAAGGTATCCCTTGGATCCATTTGATAGAATATGGGATGCTGATAGAAGTTTCACACCCTTTCATGTTGCCATTGGGTTTAAGATTCAACTCAGCTTCAGACAGTCTAGTCTTGTAGAAGAACCACCAGCAGCTGTTCTTCAAACTGGGAGAGTTTTGGCTCGAAGTAATACTCTGACATACAACCTCCCTCTTGATGCATTAGGGGACTACTACATCATCCTCTACTTTGCAGGGATTCTTCCTGTCTTCCCCTCATTTGATGTTCTCATAAATGGAGAACTAGTAAAATCAAACTACAAAATAAATAGCTCTGAAACAAGTGCTTTGTACTTAACAAAAAAGGGAATTGGGAGCTTGAATATCACATTAAAGAGTATCAGCTTTTACCCTCAGATCAATGCATTTGAAGTTTATGAGATGGTTGATATTCCAACTGATGCCTCCTCAACCACAGTTTCAGCACTGGAGGTTATTCAGCAGTCCACTGGATTGGATCTTGGATGGCAGGATGATCCATGTCTGCCTTCCCCATGGGAGAAAATTGGCTGTGAAGGAAGCCATGTTACATCATTGGATCTTTCAGACATAAATTTGAGATTCATTAGTCCTACATTCGGTGACTTGTTAGACCTCAAAATATTGGATTTGCACAACACATCGCTTACTGGTGAAATACAGAGTTTGGATGGCTTGCAGCATCTTGAGAAACTGAACCTAAGTTTCAATCAGCTAACATCTATTGGTGCAGATCTGGAGAACTTAATTAACCTTCAAATATTAGACTTGCAGAACAATAGTTTAATGGGAGTAGTACCTGATAGCTTGGGAGAGTTAGAGAACCTCCACTTACTGAATCTGGAAAACAACAAACTACAAGGTCCTCTGCCACAGTCATTGAACAAAGAAACATTAGAGATCAGGACATCTGGTAATTTGTGTCTTACCTTTTCCTTAACATCATGTGATGATGCATCATCCAGTCCTCCAATTGAAGCACCACAAGTAACTGTAGTTCCTCAGAAGAAGCACAATGTACATAACCATCTAGCAATCATAATAGGCATGGTTGGAGGAGCCACACTAGCCTTTCTCTTAATGTGTATTTCAGTGTTGATATACAAGACCAAACAACAATATGAAGCCTCACACACATCAAGAGGAGAAATGGATATGAGGAACTGGGGTGCTGCAAAAGTATTTTCCTACAAAGAAATCAAAGTAGCTACACGAAACTTCAAAGAAGTCATAGGAAAGGGTAGTTTTGGATCTGTTTATCTTGGGAAACTTCCAGATGGAAAATCTGTAGCTGTCAAAGTTCGGTTTGACAAGTCTCAACTGGGTGCTGATTCTTTCATCAATGAGGTTAATCTTCTGTCAAAAATCAGGCATCAAAATCTTGTGTCTTTGGAAGGATTTTGCCATGAAAGAAAGCATCAGATATTGGTTTATGAGTACTTGCCTGGTGGATCCCTTGCTGATCATCTCTATGATACAAACAATCAAAAGACTTCCTTAAGCTGGGTGAGAAGGTTGAAAATTGCTGTTGATGCAGCAAAAGGTTTGGACTATTTGCACAATGGAAGTGAACCAAGAATCATACATCGTGATGTGAAGTGCAGTAACATCCTCTTGGACATGGATATGAATGGCAAGGTCTGTGACTTAGGTCTCTCTAAGCAAGTAACTCAGGCAGATGCAACTCATGTCACCACTGTTGTCAAGGGCACTGCTGGTTACCTTGATCCAGAGTACTATTCCACTCAGCAGTTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGGGAGCCATTGATTCACTCTGGAACTCCTGATTCATTCAACTTGGTGTTATGGGCCAAGCCATACTTGCAGGCTGGTGCATTTGAGATAGTGGATGAAGACATAAGAGGAAGTTTTGATCCCTTGAGTATGAGAAAGGTAGCTCTCATGGCTATAAAGTCTGTGGAAAGGGATGCATCACAGAGGCCATCTATTGCAGAGGTATTGGCAGAGCTAAAGGAAGCCTACAATATTCAGCTCAGATTCCTTGAATCTTGTCAAAATGAGAATTGA 2661 0.4055 MFSKYSTGFLSLSCGGRTSFRDSSNISWVPDTTYVTTGKTTTITYSEDSSSLNISARFFPNSGRRKCYRIPANNSTTLVLVRAKFVYKNYDGLGKPPKFYVSIGTSIASTINLAEDDPWSEEFLWTVNMDTLPFCLIPMPKGGSPVISSLEIRPLPQGAYTNGMKDFPNKLLRKSYRIDCGHSNDSIRYPLDPFDRIWDADRSFTPFHVAIGFKIQLSFRQSSLVEEPPAAVLQTGRVLARSNTLTYNLPLDALGDYYIILYFAGILPVFPSFDVLINGELVKSNYKINSSETSALYLTKKGIGSLNITLKSISFYPQINAFEVYEMVDIPTDASSTTVSALEVIQQSTGLDLGWQDDPCLPSPWEKIGCEGSHVTSLDLSDINLRFISPTFGDLLDLKILDLHNTSLTGEIQSLDGLQHLEKLNLSFNQLTSIGADLENLINLQILDLQNNSLMGVVPDSLGELENLHLLNLENNKLQGPLPQSLNKETLEIRTSGNLCLTFSLTSCDDASSSPPIEAPQVTVVPQKKHNVHNHLAIIIGMVGGATLAFLLMCISVLIYKTKQQYEASHTSRGEMDMRNWGAAKVFSYKEIKVATRNFKEVIGKGSFGSVYLGKLPDGKSVAVKVRFDKSQLGADSFINEVNLLSKIRHQNLVSLEGFCHERKHQILVYEYLPGGSLADHLYDTNNQKTSLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMDMNGKVCDLGLSKQVTQADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLIHSGTPDSFNLVLWAKPYLQAGAFEIVDEDIRGSFDPLSMRKVALMAIKSVERDASQRPSIAEVLAELKEAYNIQLRFLESCQNEN* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00270 886 ProSiteProfiles Protein kinase domain profile. 597 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00270 886 SMART serkin_6 597 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00270 886 Gene3D Phosphorylase Kinase; domain 1 559 672 - -
Phac10g00270 886 FunFam serine/threonine-protein kinase PBS1-like 564 672 - -
Phac10g00270 886 Gene3D Transferase(Phosphotransferase) domain 1 673 882 - -
Phac10g00270 886 SMART LRR_typ_2 441 464 IPR003591 -
Phac10g00270 886 SMART LRR_typ_2 465 488 IPR003591 -
Phac10g00270 886 SMART LRR_typ_2 418 440 IPR003591 -
Phac10g00270 886 Pfam Leucine rich repeat 420 478 IPR001611 GO:0005515
Phac10g00270 886 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
Phac10g00270 886 SUPERFAMILY L domain-like 341 488 - -
Phac10g00270 886 PANTHER OS07G0107800 PROTEIN-RELATED 433 872 - -
Phac10g00270 886 Pfam Malectin-like domain 12 326 IPR024788 -
Phac10g00270 886 Gene3D - 174 329 - -
Phac10g00270 886 SUPERFAMILY Protein kinase-like (PK-like) 577 868 IPR011009 -
Phac10g00270 886 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 673 879 - -
Phac10g00270 886 CDD STKc_IRAK 603 870 - -
Phac10g00270 886 Pfam Protein tyrosine and serine/threonine kinase 599 867 IPR001245 GO:0004672|GO:0006468
Phac10g00270 886 ProSiteProfiles Leucine-rich repeat profile. 420 442 IPR001611 GO:0005515
Phac10g00270 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Phac10g00270 886 Gene3D Ribonuclease Inhibitor 339 510 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00270 Phac-Chr10 3922803 3930693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00270 8 881 Receptor kinase-like Gene Family AT5G48740 62.929 0.0 1091
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phac10g00270 Malectin_like 3.9e-54 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00270 - - gmx:100812804 1601.65