Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00241 ATGGAAGGTCGCCGGAGAATAACGCTCTACGATCAAATGACAGCTGGCAACGGCAACAACCGCCACAACAGCAGCAGCAGCAACCGAGACTCACTCGCGAGCCTCATGCTCGACGACGTCGTGTTCAATAAGACCGAAGCCGAAGCCGAAGCGAGCCGCGATCTGAGCCGAAGCCGGACTCTCCAAGACATCATTCGCGAAGAGAAACCTAACGGAGACGCGAAGGATCGCAACTCTTGGAAAGCCTTCAAGGAGAAGCTTCGGCTCAAGCGCGCTGTCGGCTTGGCTTGGTCCTCCGCCACTGGTCACAGCAATAATAACGACAATGATGATGGAAACTTACCTCAAACTCGCCTCCACTCGGACGACGCGGCGACTCAGCAGAACGACGTGGTTGCGGAGGACGCAAACGATTCAGATCCGATTGAACGGTTCGGATCTCCGGCGGAGAACACGGCGGCCGGAGGCGATTCCTCCGAGGGGGAGAACAACCAGGAGGCGGCGGTTGGCGTGTCGTTGATGGATTTGTTGGAGGAAGCGGAGCAGGAACTGGATTTGTACAGAGTGAGCGATGATGATGTGGTGGCAGATTTTGAGAAGAGAGAAGAAGATGAAGAAGAAAAGGAGGGTTTGGTAGAGTACAACTGCAACTGCTGCGTCTGCATGGTACGCCATAAAGGCGCGGCGTTTATCCCCTGCGGACACACCTTCTGCAGAATGTGCTCAAGGGAGATTTGGGCCAGCAGAGGGAATTGCCCTCTCTGCAATAATTTAATTTTGGAAATTCTTGATATTTTCTGA 801 0.5393 MEGRRRITLYDQMTAGNGNNRHNSSSSNRDSLASLMLDDVVFNKTEAEAEASRDLSRSRTLQDIIREEKPNGDAKDRNSWKAFKEKLRLKRAVGLAWSSATGHSNNNDNDDGNLPQTRLHSDDAATQQNDVVAEDANDSDPIERFGSPAENTAAGGDSSEGENNQEAAVGVSLMDLLEEAEQELDLYRVSDDDVVADFEKREEDEEEKEGLVEYNCNCCVCMVRHKGAAFIPCGHTFCRMCSREIWASRGNCPLCNNLILEILDIF* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00241 266 MobiDBLite consensus disorder prediction 12 29 - -
Phac10g00241 266 MobiDBLite consensus disorder prediction 135 163 - -
Phac10g00241 266 MobiDBLite consensus disorder prediction 99 119 - -
Phac10g00241 266 CDD RING-HC 218 255 - -
Phac10g00241 266 Pfam Zinc finger, C3HC4 type (RING finger) 216 259 - -
Phac10g00241 266 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 176 263 IPR013083 -
Phac10g00241 266 SMART ring_2 218 255 IPR001841 -
Phac10g00241 266 MobiDBLite consensus disorder prediction 1 29 - -
Phac10g00241 266 ProSiteProfiles Zinc finger RING-type profile. 218 256 IPR001841 -
Phac10g00241 266 SUPERFAMILY RING/U-box 217 262 - -
Phac10g00241 266 PANTHER OS01G0917900 PROTEIN 6 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00241 Phac-Chr10 3765680 3767592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00241 4 266 C3H Transcription Factor Family AT3G25030 37.956 6.93e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00241 - - gmx:100819018 359.762