Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00237 ATGTTTGTTCCAACAGTGAACCAAAAGTTGCTTGAAGACCTTGAAGTAATGGGATTTCCAAAGGCCCGGGCAACCAGAGCACTTCATTATTCTGGCAATACCAACTTAGAGGATGCTATAAATTGGATCGTTGATCATGAGAATGACATTGATATTGATGAGATGCCATTGGTAGATGTAGACATTGAGGTAGAGTCCACTGAGTCCTTCCCCATCTCAGAAGAAATGAGAATCAAAGCACAGAGTTTAAGGGAACAAGAACGTAAGAGGAAAGAGCAGGAAGAGAAAAGATTGGAGAGAGAAAGGGAGAAGGAGAGGATTCAAGCAGGTAAGAGACTCCTTGAAGCAAAGCGAATTGCTGAAGAAAATGAAAGAAAACGGGATTTATCCCTGAGAAAAGCAGAAAAAGAAGAAGAGAAAAGAGCTAGAGAGAGAGTTCTACAGAAACTAGAGCAGGATAAGTTAAATAGAAGATTTAAGCAAGGATTGCCTTTAGAAGGCCAAGCAACTGTTAGATCTTCTGCTACTAAAATACAACAGGAAAAGAAGTTAAATCCTGTTTATACAACTACAAAATCTGAGCAGTTAAGAGAATGTCTGAGGAATCTGAAGCGTAACCATCAGGGTGAGGATGCCAGAGTCAGAAGAGCCTTTCAAACACTGCTAGTCTATATTGGAAATGTTGCGAAGAATCCTAAGGAGGAAAAGTACAGGAAGATACGACTGCATAACCCATTATTCCTGGATAGAGTTGGAAGCTTAAATGGAGGTGTAGAGTTTCTTGAGCTATGTGGTTTTGAGAGAACTGGTGACTTCTTGCTTCTTCCTCAAGAAAAGATTGACATGGCACTGCTGAATTCAGCTGGTTTTGTCTTAAATTCTGCAATGACAAACCCTTTCTTTGGAGTTTTAAGTAAAGCTCACAATTAA 930 0.3978 MFVPTVNQKLLEDLEVMGFPKARATRALHYSGNTNLEDAINWIVDHENDIDIDEMPLVDVDIEVESTESFPISEEMRIKAQSLREQERKRKEQEEKRLEREREKERIQAGKRLLEAKRIAEENERKRDLSLRKAEKEEEKRARERVLQKLEQDKLNRRFKQGLPLEGQATVRSSATKIQQEKKLNPVYTTTKSEQLRECLRNLKRNHQGEDARVRRAFQTLLVYIGNVAKNPKEEKYRKIRLHNPLFLDRVGSLNGGVEFLELCGFERTGDFLLLPQEKIDMALLNSAGFVLNSAMTNPFFGVLSKAHN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00237 309 Pfam PUB domain 213 281 IPR018997 -
Phac10g00237 309 CDD PUB_UBA_plant 200 304 - -
Phac10g00237 309 Coils Coil 76 108 - -
Phac10g00237 309 CDD UBA_PUB_plant 5 53 - -
Phac10g00237 309 Gene3D - 192 294 - -
Phac10g00237 309 PANTHER F13M7.16 PROTEIN 1 304 - -
Phac10g00237 309 SUPERFAMILY UBA-like 4 57 IPR009060 GO:0005515
Phac10g00237 309 Gene3D - 8 53 - -
Phac10g00237 309 Pfam UBA/TS-N domain 7 43 IPR015940 -
Phac10g00237 309 Coils Coil 119 156 - -
Phac10g00237 309 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Phac10g00237 309 SUPERFAMILY PUG domain-like 188 300 IPR036339 -
Phac10g00237 309 MobiDBLite consensus disorder prediction 81 105 - -
Phac10g00237 309 SMART PGNneu 216 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00237 Phac-Chr10 3727217 3734780 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00237 1 304 C2H2 Transcription Factor Family AT1G04850 62.662 2.48e-105 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00237 - K24348 gmx:100781260 499.204