Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00198 ATGCGTGTTGAAATGGATTGGTATGAGATTCAAGAGTGTTCCAAGCTTTTACTCAAAACAAGAACAAAGAAGAGAACTTTGTGGAAGAGAAACATTGCACACCACACATATCTTCAGATGACGAGCATTGCATCTGATTTGGCAAAGTCAAATTTGGAGAAATTGATTAATGCCATACTAGAACAATCACGTTATATTTGTTGCTTCACAAGCATTACTGAGGACTTTGAAAAGGAAAGGAAAAACTTGATAGCAAAAAAGGAAACATTGGAAGAGTATGTTAGAGTGGCAAAGAGAAGAAATGATAACATACCAAGAGATGTCACTCTTTGGCAAAAGCAAGCTGAAGACCTTATTGAAGAAGACACAAAAACGAAAGTGACATGTTTTTTTGGGAGCTTTCCTAACTACAAACGACAATATAGTAGGGGGAAGGATTTGGAAAGCAAGACAGGGGAGATTAAAAGACTCATGGAACGTAACCTTCATAATTTTGGAATCACTCGTGATGTTCCAGACATTGAATATCATTCTTCTCAAAATTACATTTCTTTCGAAAGTAGAAAGTTAAAATTTGAAGAACTTTTTAATGCATTGACAGATGTGAACAACTATATGATTGGATTGCAAGGGATGGGGGGAACAGGTAAAACAACATTAGCAAAAGAGATTGGTAAGAAGCTTAAGAAATCAAAAATTTTTGATCATGTTGTTGATACTGCAGTATCTAATACCCCTGATACAAAAAAAATTCAAGATGATATTGCAGGACCACTAGGATTGCCATTGAACGATTGTACTGAATTAGAAAGGCATAGAAAGTTGTGGGATAGATTGACCAATGGTGAGAAAATTCTTGTAATTCTAGATGATGTGTGGGGAGATATCAGTTTTGAAAAAATAGGTATTCCATTGAAGGGCGACCACAATGGTTGCAAAATTCTTGTAACAACCCGCGATATGAACATATGCCATAAAATGGATTGTGAGAAGATAATTCAACTTGATATCTTACCGGAGGAAGAGGGATGGATATTGTTCCAAAAGCATGCTGGTTTAAGTGATACTTCCTCTAAAAGTATTCTTAATAAAGGTCGAAAAATTGCCAAAGAATGTAAAGGATTGCCAATTGCAATTGCAGTTATTGCTGCTAGTTTAAAGGGGAAACAACGTCCAGAAGAATGGGATGTAGCCTTACAATCCTTGCAAAAGTCCGTGCCCGTACGAGGTGATGATGAAAACTGGAGTAAAATTTACACATGTCTGAAGTATAGTTATGACAATATGAAGAATGAAAGAGACAAGAAATTGTTCCTCTTATGTTCTGTGTTTCGAGAAGATGAAGAAATATCTGAAGAAGTTTTTCTGAGGCTTGCCATAGGAATGAGTCTCATTGATAACATTGATGAAAATTCCAGTTATGGTGAATGTCGTAATCAAGCTATTGTAGCAAAATATAGACTCATAGATTCATGTTTATTATTGCATGGAGACTTTGGAAGTGTAAAAATGCATGATTTGGTTCGTGAAGTGGCTTTATCGATAGCTAACAAGGAGATTCTGGCAGTGGATACATCTAACAATAATGAAATGACAATGGTTGAAAAGGGGAAGAATATTAAATATTTTTTGTTTGAAGGGAAAAGAAAAAATCTTTTTTCCTTCAAATTTGATGGATCTAAACTTGATCTTCTTATAGCCTACTTAAATGAAACGGAAAATTTTGATGTGGAAGTCCCAAATTCATTCTTTGAAAATATAGCAGGGCTTCGAGTTTTGTATTTATCAAGCAATTTAAGGAGCCTTCAAGGAATGTGGAAAAATCTCATACCTGAGATTATTTATATTGATGATGATGGTGAGTCTAATCTAGTTGAGATTATTTTAAAATATATTCCACAACTCAAATGCCTAATCGACAATACTAATTATCGTGTACAAAATGCCTTATCCAAGTTGGTTGCACTTAGACTTTTTGAAATGGAAAATTTGAAAGAAATATGTTGTGGACCCCTTCCCTTTGAACTTTTGAAGAGTTTAGAAAATTTCATTCTCAATGATTGTATACATTTAGAAGGCATGCTGTTTAAGAGCAAGATATCCCTCTGCAATCTTAAGCAATTGAGGATACAGAAATGTCCAATGTTAACATCTCTGTTTGAGTTATCGACCACACAAAGCCTACTATTGTTGGAGAGGTTGGAGATAAAGAATTGCGAACAACTGAAAAGTATAGTAAAAGATGAAAACAAAAGGAAAGAGGATTCAGGAGAAGGAGAAGAAATAGTTGATGCTCATAATCATAGCAAGAGTTTTACTTCAACCTTTCCAAATTTAAAGACTCTTATTATCTCCAAGTGTCCCCAATTACTCTTTATACTTCCAGTGGTTGTTGCTCGAAATGTTCCAAAACTTGAATATATGGATATAACAGAGTGTAATCTGTTAAAATACGTATTTGGCCCATACCAGCATAAGCATGAAGAGGAAGATTTACATCATGAGTCAAAGGATGTCATATTCACTACTCTAAGTCAAGTTCATCTAGCAAACTTGCCTAATTTTGTGGACATTTTTCCAGAATGTGATGAGTTCATGTGTTTATCAGTGCACATGTCATCTTCTAGATATGAGTCCAAGGCACAAGTAGAATCAAACCCTATGAAATGTAAGATTTTACATTGGATCCATAAATATAGAAACAAATGGAGAACTGCCAAAATTCCTTCAGATTCCAAGGATCAATTACAAGATTGTTCTCTCTCAGTGGTAAATGACTCCGGTGCAAATGATGTGATTGGACAAGAAATGATTGTAACTTTGAAAAACATTGCATTGAATTATATGGCTCTACAAAATGTTACAGCGTTAGTAATTGAAGAATGTAAAAAAATTGAAGTAATATTTTGTCCGTCTATGCTGGAAGGGTTACCATATATGCATACACTTATCATATTAAGATGCAATGAATTAAAAGAGATAATTGGTGAGGATACAAAGAATCAGAGAAAGCCATTTTTCCCAAGGTTGAAAGTTCTTGTGATAGGAGAATGCAACAAATTGAAATGTGTCTTTCCCATTTCAACTTCCAAAATGTTATCCGAGTTAGAAGTTGTGGTAATCATAGAAGCAAGTATGCTAGAAGAAGTATTCGAAGGGGATAGTGATGTAAGAGCTGAGATTCCAAATATGAAAGTTGCAATATTTGTTCAACTTCCAAGACTTCGCCAAGAGATTGAATTTCTTACGGTAAAAGATTGTTGGGTGGAGAAATGTCCAAAACTTTCCTTGTCTTCATCCCTTCAAAGATTTTTTAAAGGAACATGGTTTGTCTTTCAAAGATTAAAAGCAGCTCTTTGTGATAAGATTTATGAAGAAAACCAACATGAACATGACTTTGAATCAAATGAGTTGGAGGATATAGTGAAACAAAAGGAAGAAAGAATAGAGGAAGAACAAGAAATTGTTGAAAAAGCTTCAATGGCAATATCACCAACAGATACTCCACTCAATAAAAGACAGTCACCAGTAAGTTCTTTTGAATTTGGGTCAAAACTGAGAAATCAGCTTATAGGGAACACATTACAGGAGATGTCAGATGATGTTTATGAAGATTCTAAAGGAAGAGTAATCAGCAATCAGAATGAAATGGCAAAAGCCACTGAAGACTTTCCAATTGGAAATAAAGTTGAAGTAGCATCAGGGACTGATTTTGCTTGTACTATAACAAAGGAGCTTGAGCAACTGGTGTCTAACAAGCATTTGAGTTTAGAGAACTTGGGTCTGTTAAGTAATTTCCTTGTGAAGCATCCTTGTGTTGGTTTAATGGGAAATACAGTGAGTGATAGATACAAGGGCTTTGCCTACACTTGTCTGGCTAACCTTTTGAAGTTTCTCCAAAGCCATAGTATTTTGGATGTGTTGGGGTCAAGTCAATCTGAATTTATTGAGTTGTTACAAGATCTTCGTAATCTTGGTTTCAACAAGGATTGCAAAGTCAAATTTGGAGAAATTGATTAA 4020 0.3478 MRVEMDWYEIQECSKLLLKTRTKKRTLWKRNIAHHTYLQMTSIASDLAKSNLEKLINAILEQSRYICCFTSITEDFEKERKNLIAKKETLEEYVRVAKRRNDNIPRDVTLWQKQAEDLIEEDTKTKVTCFFGSFPNYKRQYSRGKDLESKTGEIKRLMERNLHNFGITRDVPDIEYHSSQNYISFESRKLKFEELFNALTDVNNYMIGLQGMGGTGKTTLAKEIGKKLKKSKIFDHVVDTAVSNTPDTKKIQDDIAGPLGLPLNDCTELERHRKLWDRLTNGEKILVILDDVWGDISFEKIGIPLKGDHNGCKILVTTRDMNICHKMDCEKIIQLDILPEEEGWILFQKHAGLSDTSSKSILNKGRKIAKECKGLPIAIAVIAASLKGKQRPEEWDVALQSLQKSVPVRGDDENWSKIYTCLKYSYDNMKNERDKKLFLLCSVFREDEEISEEVFLRLAIGMSLIDNIDENSSYGECRNQAIVAKYRLIDSCLLLHGDFGSVKMHDLVREVALSIANKEILAVDTSNNNEMTMVEKGKNIKYFLFEGKRKNLFSFKFDGSKLDLLIAYLNETENFDVEVPNSFFENIAGLRVLYLSSNLRSLQGMWKNLIPEIIYIDDDGESNLVEIILKYIPQLKCLIDNTNYRVQNALSKLVALRLFEMENLKEICCGPLPFELLKSLENFILNDCIHLEGMLFKSKISLCNLKQLRIQKCPMLTSLFELSTTQSLLLLERLEIKNCEQLKSIVKDENKRKEDSGEGEEIVDAHNHSKSFTSTFPNLKTLIISKCPQLLFILPVVVARNVPKLEYMDITECNLLKYVFGPYQHKHEEEDLHHESKDVIFTTLSQVHLANLPNFVDIFPECDEFMCLSVHMSSSRYESKAQVESNPMKCKILHWIHKYRNKWRTAKIPSDSKDQLQDCSLSVVNDSGANDVIGQEMIVTLKNIALNYMALQNVTALVIEECKKIEVIFCPSMLEGLPYMHTLIILRCNELKEIIGEDTKNQRKPFFPRLKVLVIGECNKLKCVFPISTSKMLSELEVVVIIEASMLEEVFEGDSDVRAEIPNMKVAIFVQLPRLRQEIEFLTVKDCWVEKCPKLSLSSSLQRFFKGTWFVFQRLKAALCDKIYEENQHEHDFESNELEDIVKQKEERIEEEQEIVEKASMAISPTDTPLNKRQSPVSSFEFGSKLRNQLIGNTLQEMSDDVYEDSKGRVISNQNEMAKATEDFPIGNKVEVASGTDFACTITKELEQLVSNKHLSLENLGLLSNFLVKHPCVGLMGNTVSDRYKGFAYTCLANLLKFLQSHSILDVLGSSQSEFIELLQDLRNLGFNKDCKVKFGEID* 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00198 1339 Gene3D - 426 514 IPR036388 -
Phac10g00198 1339 Gene3D Ribonuclease Inhibitor 760 1108 IPR032675 -
Phac10g00198 1339 Gene3D - 162 334 IPR027417 -
Phac10g00198 1339 FunFam Probable disease resistance protein At1g61300 168 332 - -
Phac10g00198 1339 Pfam NB-ARC domain 193 428 IPR002182 GO:0043531
Phac10g00198 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 441 IPR027417 -
Phac10g00198 1339 SUPERFAMILY RNI-like 946 1053 - -
Phac10g00198 1339 SUPERFAMILY RNI-like 580 819 - -
Phac10g00198 1339 Coils Coil 1135 1162 - -
Phac10g00198 1339 PRINTS Disease resistance protein signature 206 221 - -
Phac10g00198 1339 PRINTS Disease resistance protein signature 279 293 - -
Phac10g00198 1339 PRINTS Disease resistance protein signature 800 816 - -
Phac10g00198 1339 PRINTS Disease resistance protein signature 372 386 - -
Phac10g00198 1339 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 619 791 - -
Phac10g00198 1339 Gene3D - 337 425 IPR042197 -
Phac10g00198 1339 Coils Coil 73 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00198 Phac-Chr10 3394768 3416368 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00198 183 745 WRKY Transcription Factor Family AT5G45050 24.320 2.97e-19 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00198 - - pvu:PHAVU_010G025100g 1179.85