Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00197 ATGCAATGCAACTTTGAAAATGTTGGAATCATTCGTGATGTTCCAGACATTGAATATCATTCTTCTCAAAATTACATATCTTTTGAAAGTAGAAAGTTAAAATTTGAAGAACTCTTTAATGCATTGACAAATGACAACAACTATATGATCGGATTGCAAGGGATGGGGGGCACAGGTAAAACAACATTAGCAAAAGAGATTGGTAAGAAGCTTAAGAAATCAAAATTTTTTGATCAAGTCATTGATACTACAGTATCTAATACCCCTGATACAAAGAAGATTCAGGATGATATTGCAGGACCATTAGGACTATCATTGAAGGATTATACTGAATCAGAGAGACCTAGAAGGTTGTGGGATAGATTGACCAATGGTGAGAAAATTCTTGTAGTTCTAGATGATGTGTGGGGAGATATCAATTTTGAAGAAATAGGTATTCCATTTAAGGACAACCACAATGGTTGCAAAATTCTTGTAACAACTCGCAATATGAGCATATGCCATAAAATGGAATGTGAAAAGATAATTCAACTTGATATCTTACCAGAGGAAGAGGGGTGGATATTGTTCCAAAAGCATGCTGGTTTAAGTGATACTTCCTCTAAAAGTGTTCTTAATAAAGGTCATAAAATTTCCAAAGAATGTAAAGGATTGCCAATTGCAATTGCAGTTATCGCTGGTAGTTTAAAGGGCCAAACACGTCCAGAAGAATGGGATGTAGCCTTAAAATCCTTGCAAAAGTCCATGCTCGTACGTGATGATGATGAAAATTGGAGTAAAGTTTATGCATGTTTGAAGTATAGTTATGACAATATGAAGAATAAAACAGCTAAGAAATTGTTCCTTTTATGTTCTGTGTTTCGAGAAGATGAAGAAATATCTGAAGTCCTTTTAGTCAGGCTTGCCATAGGAGCAGGTCTCATTGAGAAAAATGTTGATGATTACAATTATGATGCATGCCGTAATGAAGTTATTGTAGCAATATATAAACTCATAGATTCATGTTTATTATTGAAGGGAGAATTTGGAGGTGTGAAAATGCATGACTTGGTTCGTGAAGTGGCTTTATCAATAGCTAACAAGGAGATTTTGGCAGTGAATACATCTAACAAGAATGAAATGACAATGGTTGAAAAGGGGAAGAACATCAAATATTTGTTGTGTGAAGGAAAGAGCACGGATGTGTTTTCTTTCAAATTTGATGGATCTAAACTTGATATTCTTATTGTCTACTTAAATGAATATGGTTATGTGGAAGTACCAAATTCATTCTTTGAAAATATAGCAGGACTACGAGTTTTGTATTTACAAAATATCCATATATATGGAAAAGCAACTCTGTCATTACCACAATCAATTCAATTGTTGACCAATATTCGATCTTTATACCTTGAAGGATTCAACTTGGGTAACATATCTGTGTTTGGAATCCTAAAGGGCCTTCAGACTCTTGAATTGGTTAGGTGTTCAATGGATGAATTGCCTAGAGAGATTTCAAAATTGGTGAAAGTTAAATTATTGAACTTGAAACTTAATAATTTTGAAAGGAACAATCCATATGAAGTGATTGAAAGTTGCACTTCATTGGAAGAATTTTATTTCATTGGTAATCGCATTTCAATGACGCCTCACAATGTAAAGCTTCCTAACTATCAAAGGTTTTGTATATTTGACTGTACTGGCTACTTCATTTCGAAGGAAAGCCTCGTAAGAAATTTTCTGGATGTTTCCATGGCTGATGAAACCTTTTCTAAAGATACATTCAAGAATCTAATGCAAAAAGTAGAATTACTTCATCTAAGGCAACTTCGAGGAGCATGGAAAAATCTCATACCTGAGATTATTTTTCCTGATGATGAAGGTGCGACTAATCTAGTTGAGATTGGTTTAATTAATATTTCACAACTCAGATGCCTAATTGACAATACTGATTCTGGTGTACAAAATGCCTTATCCAAGTTGGTTGTGCTTGAACTTGTACGAATGAAGAATTTGAAAGAAATATGTAGTGGACCCCTTCCCTTTGATCTTCTGAAGAGCTTAGAAAGTTTCATTCTATGTTATTGTATACATTTTGAAGGCGCATTGTTAAAGAGCAAGATATCCTTATGCAATCTTAAGTGCTTGACTATAAGGGGATGCCCAATGTTGACATCTCTGTTTGAGTTGTCGACCACACAAAGCCTACTGTTGTTGGAGAACTTGTGGATAGATGATTGTGAAAAACTGAAAAGTATAGTAAGAGATGAAAATGAAAGGAAAAATTTAGGGAAAGAAATAGTTGATGATCATAATCATAGCAAGAATTTTACTTCAACCTTTCCAAATTTAACCACTCTTTGTATCAACAAATGTCCCCAATTAGTCTTTATACTTCCAATTGCTATTGCTCAAAATGTTCCAAGACTTGAATGTATGGATATAAGGGAGTGTAATGGGCTAAAATACTTATTTGGCTCATACCAACATAAGTATAATGAGGAAGATTTACATCATGAGTTAAAAGATGTCATATTCACTACTCTAAGTCAAAGGTCATTTTCCAGAGATGAGTCCAAGGCACAAATAGAATCAAACCCCATGAAATGTAAGATTTTACATTGGATCCATAAATATAAAAAGAAATGGAGAACTACCAAAATTCCTTTGGATTCCAATGATCAATTGCAAGACTCTTCTCTCTCAATGGTGAATGACTCCAATGCAAATGATGTGATTGGACAAACTATGGATGTATCTTTAAAAAACATAGCATTGAATGATACACCTCAAACACCTGTGAGCTCCAAGATTTTTTTTACTCTACAAAACGTTACAGTGTTAGTAATTGAGAACTATGAAAATGCTGAAGTAATATTTTGTGCTTCTATGTTGGAATGCTTACCATATTTGCATACACTTGTCATATCTGGATGCAATGAATTAAAGCAGATAATTGGTGAGGATACAAAGAATCAGAGAAAGCCATTTTTCCCAAGGCTAACAAATTGA 2991 0.3397 MQCNFENVGIIRDVPDIEYHSSQNYISFESRKLKFEELFNALTNDNNYMIGLQGMGGTGKTTLAKEIGKKLKKSKFFDQVIDTTVSNTPDTKKIQDDIAGPLGLSLKDYTESERPRRLWDRLTNGEKILVVLDDVWGDINFEEIGIPFKDNHNGCKILVTTRNMSICHKMECEKIIQLDILPEEEGWILFQKHAGLSDTSSKSVLNKGHKISKECKGLPIAIAVIAGSLKGQTRPEEWDVALKSLQKSMLVRDDDENWSKVYACLKYSYDNMKNKTAKKLFLLCSVFREDEEISEVLLVRLAIGAGLIEKNVDDYNYDACRNEVIVAIYKLIDSCLLLKGEFGGVKMHDLVREVALSIANKEILAVNTSNKNEMTMVEKGKNIKYLLCEGKSTDVFSFKFDGSKLDILIVYLNEYGYVEVPNSFFENIAGLRVLYLQNIHIYGKATLSLPQSIQLLTNIRSLYLEGFNLGNISVFGILKGLQTLELVRCSMDELPREISKLVKVKLLNLKLNNFERNNPYEVIESCTSLEEFYFIGNRISMTPHNVKLPNYQRFCIFDCTGYFISKESLVRNFLDVSMADETFSKDTFKNLMQKVELLHLRQLRGAWKNLIPEIIFPDDEGATNLVEIGLINISQLRCLIDNTDSGVQNALSKLVVLELVRMKNLKEICSGPLPFDLLKSLESFILCYCIHFEGALLKSKISLCNLKCLTIRGCPMLTSLFELSTTQSLLLLENLWIDDCEKLKSIVRDENERKNLGKEIVDDHNHSKNFTSTFPNLTTLCINKCPQLVFILPIAIAQNVPRLECMDIRECNGLKYLFGSYQHKYNEEDLHHELKDVIFTTLSQRSFSRDESKAQIESNPMKCKILHWIHKYKKKWRTTKIPLDSNDQLQDSSLSMVNDSNANDVIGQTMDVSLKNIALNDTPQTPVSSKIFFTLQNVTVLVIENYENAEVIFCASMLECLPYLHTLVISGCNELKQIIGEDTKNQRKPFFPRLTN* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00197 996 Gene3D - 180 273 IPR042197 -
Phac10g00197 996 PRINTS Disease resistance protein signature 49 64 - -
Phac10g00197 996 PRINTS Disease resistance protein signature 122 136 - -
Phac10g00197 996 PRINTS Disease resistance protein signature 798 814 - -
Phac10g00197 996 PRINTS Disease resistance protein signature 215 229 - -
Phac10g00197 996 FunFam Probable disease resistance protein At1g61300 12 175 - -
Phac10g00197 996 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 284 IPR027417 -
Phac10g00197 996 SUPERFAMILY L domain-like 346 979 - -
Phac10g00197 996 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 7 840 - -
Phac10g00197 996 Gene3D - 12 177 IPR027417 -
Phac10g00197 996 Gene3D Ribonuclease Inhibitor 572 826 IPR032675 -
Phac10g00197 996 Gene3D Ribonuclease Inhibitor 348 566 IPR032675 -
Phac10g00197 996 Pfam NB-ARC domain 35 271 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00197 Phac-Chr10 3391017 3394466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00197 26 536 WRKY Transcription Factor Family AT5G45050 24.417 9.64e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00197 - - pvu:PHAVU_010G025100g 1401.73