Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00193 ATGGAAAATCAGTTCTTTCTCAATGATGGGGTGTCACAAACACAGCATCATCATCCCCTTCACTTTCAACCCTCACCACCACCTTCTTCACTGCCCTCTTGGCAATCACTCTCACCCACCATGGGAATTCAACCAACAGTTCTGAATTGTGCCTCTGACCAAACCCAGGATTGCTTTTACAACCCCAATTGGGACAAGTCAGCAGATCATCATGGACTTCACTTTGATTCCTCAGAACTCAGTTCAATGGTCTCATCTCCTGCAGCATCATCCAACCCCAACAGCAACAGCAACATGTCCAATGAGAATTTCATCATCAGGGAATTGGTGGGGAGATTGGGAGCTATTGGGAGCTCTGATGAGATCCCACAGCACTCTCCTCACCCTTTGGTTGTGGCCTCTTCTTACATGAATAATGGCAGTAACAGCCCCAACACTTCATGTTACACCACACCTTTGAGTTCCCCTCCAAAGGTTAAGACTGTCCAGAGTTTGGTGAACGAGAGGTTGGCAAATTTGGGAGGAAAGTCAATGACTTTGAATTCCAGTGTGGCTGAATTCTCAGCTGACCCTGGCTTCGCTGAGAGGGCTGCAAAGTTTTCTTGCTTTGGCAGCAGGAGTTTCAATGGTAGGAATGTCCAATTGGGGGTGAACAACGGTGAATTGGCTCAAAGATCTGCTCCAGTGGTGGAAAATGGTGGAAAGTTATCTAGAATCTCAAGTAGTCCTTTGCTTATGACACTTGGATCTCAAATGGGTACCCAAGAGAACAAGAATTCAGCAATTCAGGACCAGGAGAAAATGGAAGTAACCAATTCTCAAGAGGAATCTACAATATCTGAGCAAACACCGAATGGAGAAATTGGGATGAAAATTCACCAAGATATGACGAATTCCAGGAAAAGAAAAGCATCTTCCAAAGGAAAAACCAGAGAAACTTCGAACTCCATCAATCCCTCCAAGGGTGTTGAAGTCAATGAGGATTCAAATTCAAAGCGCACCAAGCCAAATGATGCTGAGGGAAATGAAAAAGGGCCAGTGAAGGTTGAGGAAGAGTCCAAAGCAGTGGAAGAGAAACAGAACAAAAGCAACTCAAAACCTCCTGAGCCACCAAAAGATTACATTCATGTGAGAGCAAGAAGAGGCCAAGCCACTGACAGCCATAGTCTTGCAGAACGTGTACGGAGGGAGAAAATCAGTGAGCGGATGAAGCTGCTCCAAGATCTTGTACCAGGTTGCAATAAGGTCACTGGCAAAGCACTTATGCTAGATGAAATTATAAATTATGTTCAGTCATTGCAGCGTCAAGTTGAGTTCCTGTCCATGAAGTTGGCTTCTGTTAACACAAGGATGGATCTTGGTATTGAGAGTCTTGTTTCAAAAGATGTATTTCAATCTAATAATTCTTTGGCAACACACCAAAATCCAATATTCCCACTAGATTCCTCAGCACAAGCCTTTTATGGGCACCAGCCTCAGCAAAACCCAGTTATCCATAATAACATACCTAACAGAACGGTGACCCACTGCTCAGTGGACCCATTAGACACATCTTTGTGCCAAAATCTTGCCTTGCAATTACCTCCCCTAAATGGGTTTAGTGAAGTTGGCTCTCAGTTTCCATTAACATTCTGTGAGGATGATCTCCACACCATTGTGCAGATGGGGTTTGGGCAAACTGCAAACTGGAAAACACCAATTCAATCCCCAAGTTTCAACGGTTCAAATAATGTACCCCAGATGAAAGTTGAGCTCTGA 1758 0.4425 MENQFFLNDGVSQTQHHHPLHFQPSPPPSSLPSWQSLSPTMGIQPTVLNCASDQTQDCFYNPNWDKSADHHGLHFDSSELSSMVSSPAASSNPNSNSNMSNENFIIRELVGRLGAIGSSDEIPQHSPHPLVVASSYMNNGSNSPNTSCYTTPLSSPPKVKTVQSLVNERLANLGGKSMTLNSSVAEFSADPGFAERAAKFSCFGSRSFNGRNVQLGVNNGELAQRSAPVVENGGKLSRISSSPLLMTLGSQMGTQENKNSAIQDQEKMEVTNSQEESTISEQTPNGEIGMKIHQDMTNSRKRKASSKGKTRETSNSINPSKGVEVNEDSNSKRTKPNDAEGNEKGPVKVEEESKAVEEKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLGIESLVSKDVFQSNNSLATHQNPIFPLDSSAQAFYGHQPQQNPVIHNNIPNRTVTHCSVDPLDTSLCQNLALQLPPLNGFSEVGSQFPLTFCEDDLHTIVQMGFGQTANWKTPIQSPSFNGSNNVPQMKVEL* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00193 585 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 383 433 IPR011598 GO:0046983
Phac10g00193 585 Pfam Helix-loop-helix DNA-binding domain 387 434 IPR011598 GO:0046983
Phac10g00193 585 MobiDBLite consensus disorder prediction 1 20 - -
Phac10g00193 585 Gene3D - 380 453 IPR036638 GO:0046983
Phac10g00193 585 SMART finulus 389 439 IPR011598 GO:0046983
Phac10g00193 585 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 381 451 IPR036638 GO:0046983
Phac10g00193 585 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 267 487 IPR024097 GO:0006355
Phac10g00193 585 MobiDBLite consensus disorder prediction 310 325 - -
Phac10g00193 585 Coils Coil 430 450 - -
Phac10g00193 585 MobiDBLite consensus disorder prediction 253 287 - -
Phac10g00193 585 CDD bHLH_AtBPE_like 373 458 - -
Phac10g00193 585 MobiDBLite consensus disorder prediction 1 38 - -
Phac10g00193 585 FunFam Basic helix-loop-helix transcription factor 380 452 - -
Phac10g00193 585 MobiDBLite consensus disorder prediction 253 374 - -
Phac10g00193 585 MobiDBLite consensus disorder prediction 326 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00193 Phac-Chr10 3320893 3324544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00193 1 544 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 41.133 2.44e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac10g00193 HLH 4.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00193 - - gmx:100801233 890.567