Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00187 ATGGAACCTAAGGGGATTGGCGAACTCAAGGTACCGTTGTTGCAGGCTCCGGAGGCCTCCACCGCCGCAGTTAGGACAGTCACGTTTCAACTGAGCGACATCAAGTGTGCTTCGTGCGTAAATTCCGTCGAGGCCGTCGTCGGGAGTCTTAACGGCGTCAAAAGCGTTGCCGTTTCGCCGCTTGATGGCCGCGCCGCCATCAAGTTTGACCCCAAGTTGGTTACTGTGAAACAATTAAAAGAAGGCATTGAGGAGAGTGGGTTTGGAGTTCATGAGCTTCATGAGCAGGACATAGCAGTGTGCCGGGTGAGGATTAAAGGAATGGCATGCACAAGCTGCTCTGAGTCCGTTGAGAATGCCCTTCAAATGGTTGAAGGGGTGAAAAAGGCAATAGTTGGTCTTGCTTTGGAGGAGGCAAAAGTACACTTTGATCCTAATCTCACTGATGTTGACAAGATAATTGAGGCCATAGAGGATACAGGTTTTGGAACTGATCTTATTAGCTCTGGGAATGATGCTAACAAAGTGTTTCTAAAGCTTGAAGGTGTCTATACCGCAGAAGATGTAAATTTAGTAATGTCTTCTCTTGAGTTAGCTGTCGGGGTGAACCATGTTGAGATGGATTTGTCAGAACATAAAGTTACAGTTAGCTATGATCCGGATGTCACAGGTCCAAGATCTCTCATTCACTGTGTTCAGGAAGCTAGCTGTGGCCCCAAGAAGTATCAAGCAACCTTATACTCTCCTTCGAGGCAAAGAGGAAGGGATAAGGTGAACGAAATCCGTATGTATAGGGACCAATTTTTGTTCAGCTGCTTATTTTCTGTTCCGGTGTTTGTATTTGCCATGGTGCTTCCCATGCTTCCTCCTTATGGCAACTGGTTAAACTACAGGATCCACAACATGCTTACTCTTGGGCTGTTTTTAAGATGGATTCTTTGCACGCCTGTCCAGTTCATAATTGGCAAAAGGTTCTATGTTGGATCATATCATGCACTGAAGCGAAAATCTGCTAACATGGATGTGCTTGTTGCGCTTGGCACAAATGCTGCTTATTTTTATTCTCTATATATTTTAGTAAAAGCGCTGACTTCGGATACATTTGAAGGACAAGATTTCTTTGAAACAAGTTCTATGTTGATATCCTTTATTCTATTAGGGAAGTATTTGGAAATTGTGGCTAAAGGGAAAACATCGGATGCTTTAGGAAAGCTGACTCAACTTGTTCCTGATAAAGCTTATTTAGTAGCCATTGATACTGATGGAAATATAATCTCTGAGACAGAAATTGACACTCAACTTATACAAAAAAATGACATAATTAAGATTGTTCCTGGGACCAAAATTCCTGTTGATGGTATTGTTATAAAAGGACAAAGCTACGCAAATGAAAGTATGATCACTGGGGAGGCAAGACCTGTTGATAAAAGCCCAGGAGACAAGGTCATCAGTGGAACCATCAATGAAAATGGATGCTTACTGGTTAAGGCCACACATGTTGGATCAGACACTGCACTTTCTCAAATAGTTCAACTCGTTGAAGCTGCTCAACTAGCCAAAGCACCAGTTCAAAAACTTGCTGACCATATTTCAAGGGTTTTTGTTCCAATAGTGGTTGCTGTGGCACTAATAACTTGGCTTGGATGGTTCATTCCTGGCAAAGCTGGTATTTTCCCTAAAGATTGGATACCAACAGCAATGGATGCATTTGAGCTTGCTTTGCAGTTTGCTATTTCTGTGTTGGTTGTTGCTTGCCCATGTGCTTTGGGACTTGCAACACCAACAGCAGTCATGGTTGCTTCAGGCATGGGTGCTTCTCAAGGTGTGCTCATCAAGGGTGGAAATGCACTGGAAAAGGCCCACAAGGTAACAGTTGTTGTGTTTGATAAGACTGGCACACTAACAGTTGGGAAGCCAGAGGTAGTTGGTGCAGTTTTGTTTTCTGAATTTTCCATGGAAGAGTTATGTGACGTGACAATTGCTGTGGAGGTATTTTTCTATGTTGAATACTGCACATATTTGGATATCTGA 2031 0.4303 MEPKGIGELKVPLLQAPEASTAAVRTVTFQLSDIKCASCVNSVEAVVGSLNGVKSVAVSPLDGRAAIKFDPKLVTVKQLKEGIEESGFGVHELHEQDIAVCRVRIKGMACTSCSESVENALQMVEGVKKAIVGLALEEAKVHFDPNLTDVDKIIEAIEDTGFGTDLISSGNDANKVFLKLEGVYTAEDVNLVMSSLELAVGVNHVEMDLSEHKVTVSYDPDVTGPRSLIHCVQEASCGPKKYQATLYSPSRQRGRDKVNEIRMYRDQFLFSCLFSVPVFVFAMVLPMLPPYGNWLNYRIHNMLTLGLFLRWILCTPVQFIIGKRFYVGSYHALKRKSANMDVLVALGTNAAYFYSLYILVKALTSDTFEGQDFFETSSMLISFILLGKYLEIVAKGKTSDALGKLTQLVPDKAYLVAIDTDGNIISETEIDTQLIQKNDIIKIVPGTKIPVDGIVIKGQSYANESMITGEARPVDKSPGDKVISGTINENGCLLVKATHVGSDTALSQIVQLVEAAQLAKAPVQKLADHISRVFVPIVVAVALITWLGWFIPGKAGIFPKDWIPTAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGMGASQGVLIKGGNALEKAHKVTVVVFDKTGTLTVGKPEVVGAVLFSEFSMEELCDVTIAVEVFFYVEYCTYLDI* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00187 676 ProSitePatterns Heavy-metal-associated domain. 105 134 IPR017969 GO:0046872
Phac10g00187 676 FunFam Copper-transporting ATPase 1, putative 395 517 - -
Phac10g00187 676 FunFam ATPase copper transporting beta 22 95 - -
Phac10g00187 676 PRINTS Copper-transporting ATPase 1 signature 26 51 - -
Phac10g00187 676 PRINTS Copper-transporting ATPase 1 signature 52 75 - -
Phac10g00187 676 PRINTS Copper-transporting ATPase 1 signature 123 144 - -
Phac10g00187 676 SUPERFAMILY HMA, heavy metal-associated domain 170 239 IPR036163 GO:0046872
Phac10g00187 676 Gene3D - 20 91 - -
Phac10g00187 676 CDD HMA 28 91 IPR006121 GO:0046872
Phac10g00187 676 SUPERFAMILY HMA, heavy metal-associated domain 22 96 IPR036163 GO:0046872
Phac10g00187 676 Pfam E1-E2 ATPase 420 605 - -
Phac10g00187 676 Gene3D - 395 517 - -
Phac10g00187 676 Gene3D - 100 170 - -
Phac10g00187 676 ProSitePatterns E1-E2 ATPases phosphorylation site. 629 635 IPR018303 -
Phac10g00187 676 ProSiteProfiles Heavy-metal-associated domain profile. 99 165 IPR006121 GO:0046872
Phac10g00187 676 NCBIfam HAD-IC family P-type ATPase 380 658 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac10g00187 676 ProSiteProfiles Heavy-metal-associated domain profile. 174 240 IPR006121 GO:0046872
Phac10g00187 676 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 20 664 - -
Phac10g00187 676 ProSiteProfiles Heavy-metal-associated domain profile. 25 91 IPR006121 GO:0046872
Phac10g00187 676 SUPERFAMILY Calcium ATPase, transmembrane domain M 372 618 IPR023298 -
Phac10g00187 676 Gene3D - 594 660 IPR023214 -
Phac10g00187 676 NCBIfam copper ion binding protein 103 162 IPR006122 GO:0005507
Phac10g00187 676 NCBIfam copper ion binding protein 27 90 IPR006122 GO:0005507
Phac10g00187 676 SUPERFAMILY Calcium ATPase, transduction domain A 427 513 IPR008250 -
Phac10g00187 676 Pfam Heavy-metal-associated domain 28 88 IPR006121 GO:0046872
Phac10g00187 676 Pfam Heavy-metal-associated domain 102 162 IPR006121 GO:0046872
Phac10g00187 676 FunFam Copper-transporting ATPase HMA5 98 169 - -
Phac10g00187 676 ProSitePatterns Heavy-metal-associated domain. 31 59 IPR017969 GO:0046872
Phac10g00187 676 CDD HMA 103 163 IPR006121 GO:0046872
Phac10g00187 676 Gene3D - 172 248 - -
Phac10g00187 676 SUPERFAMILY HMA, heavy metal-associated domain 95 169 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00187 Phac-Chr10 3242435 3248879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00187 29 664 Primary Pumps ATPases AT1G63440 54.829 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00187 K17686 - gmx:100793894 1189.48