Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac10g00187 | ATGGAACCTAAGGGGATTGGCGAACTCAAGGTACCGTTGTTGCAGGCTCCGGAGGCCTCCACCGCCGCAGTTAGGACAGTCACGTTTCAACTGAGCGACATCAAGTGTGCTTCGTGCGTAAATTCCGTCGAGGCCGTCGTCGGGAGTCTTAACGGCGTCAAAAGCGTTGCCGTTTCGCCGCTTGATGGCCGCGCCGCCATCAAGTTTGACCCCAAGTTGGTTACTGTGAAACAATTAAAAGAAGGCATTGAGGAGAGTGGGTTTGGAGTTCATGAGCTTCATGAGCAGGACATAGCAGTGTGCCGGGTGAGGATTAAAGGAATGGCATGCACAAGCTGCTCTGAGTCCGTTGAGAATGCCCTTCAAATGGTTGAAGGGGTGAAAAAGGCAATAGTTGGTCTTGCTTTGGAGGAGGCAAAAGTACACTTTGATCCTAATCTCACTGATGTTGACAAGATAATTGAGGCCATAGAGGATACAGGTTTTGGAACTGATCTTATTAGCTCTGGGAATGATGCTAACAAAGTGTTTCTAAAGCTTGAAGGTGTCTATACCGCAGAAGATGTAAATTTAGTAATGTCTTCTCTTGAGTTAGCTGTCGGGGTGAACCATGTTGAGATGGATTTGTCAGAACATAAAGTTACAGTTAGCTATGATCCGGATGTCACAGGTCCAAGATCTCTCATTCACTGTGTTCAGGAAGCTAGCTGTGGCCCCAAGAAGTATCAAGCAACCTTATACTCTCCTTCGAGGCAAAGAGGAAGGGATAAGGTGAACGAAATCCGTATGTATAGGGACCAATTTTTGTTCAGCTGCTTATTTTCTGTTCCGGTGTTTGTATTTGCCATGGTGCTTCCCATGCTTCCTCCTTATGGCAACTGGTTAAACTACAGGATCCACAACATGCTTACTCTTGGGCTGTTTTTAAGATGGATTCTTTGCACGCCTGTCCAGTTCATAATTGGCAAAAGGTTCTATGTTGGATCATATCATGCACTGAAGCGAAAATCTGCTAACATGGATGTGCTTGTTGCGCTTGGCACAAATGCTGCTTATTTTTATTCTCTATATATTTTAGTAAAAGCGCTGACTTCGGATACATTTGAAGGACAAGATTTCTTTGAAACAAGTTCTATGTTGATATCCTTTATTCTATTAGGGAAGTATTTGGAAATTGTGGCTAAAGGGAAAACATCGGATGCTTTAGGAAAGCTGACTCAACTTGTTCCTGATAAAGCTTATTTAGTAGCCATTGATACTGATGGAAATATAATCTCTGAGACAGAAATTGACACTCAACTTATACAAAAAAATGACATAATTAAGATTGTTCCTGGGACCAAAATTCCTGTTGATGGTATTGTTATAAAAGGACAAAGCTACGCAAATGAAAGTATGATCACTGGGGAGGCAAGACCTGTTGATAAAAGCCCAGGAGACAAGGTCATCAGTGGAACCATCAATGAAAATGGATGCTTACTGGTTAAGGCCACACATGTTGGATCAGACACTGCACTTTCTCAAATAGTTCAACTCGTTGAAGCTGCTCAACTAGCCAAAGCACCAGTTCAAAAACTTGCTGACCATATTTCAAGGGTTTTTGTTCCAATAGTGGTTGCTGTGGCACTAATAACTTGGCTTGGATGGTTCATTCCTGGCAAAGCTGGTATTTTCCCTAAAGATTGGATACCAACAGCAATGGATGCATTTGAGCTTGCTTTGCAGTTTGCTATTTCTGTGTTGGTTGTTGCTTGCCCATGTGCTTTGGGACTTGCAACACCAACAGCAGTCATGGTTGCTTCAGGCATGGGTGCTTCTCAAGGTGTGCTCATCAAGGGTGGAAATGCACTGGAAAAGGCCCACAAGGTAACAGTTGTTGTGTTTGATAAGACTGGCACACTAACAGTTGGGAAGCCAGAGGTAGTTGGTGCAGTTTTGTTTTCTGAATTTTCCATGGAAGAGTTATGTGACGTGACAATTGCTGTGGAGGTATTTTTCTATGTTGAATACTGCACATATTTGGATATCTGA | 2031 | 0.4303 | MEPKGIGELKVPLLQAPEASTAAVRTVTFQLSDIKCASCVNSVEAVVGSLNGVKSVAVSPLDGRAAIKFDPKLVTVKQLKEGIEESGFGVHELHEQDIAVCRVRIKGMACTSCSESVENALQMVEGVKKAIVGLALEEAKVHFDPNLTDVDKIIEAIEDTGFGTDLISSGNDANKVFLKLEGVYTAEDVNLVMSSLELAVGVNHVEMDLSEHKVTVSYDPDVTGPRSLIHCVQEASCGPKKYQATLYSPSRQRGRDKVNEIRMYRDQFLFSCLFSVPVFVFAMVLPMLPPYGNWLNYRIHNMLTLGLFLRWILCTPVQFIIGKRFYVGSYHALKRKSANMDVLVALGTNAAYFYSLYILVKALTSDTFEGQDFFETSSMLISFILLGKYLEIVAKGKTSDALGKLTQLVPDKAYLVAIDTDGNIISETEIDTQLIQKNDIIKIVPGTKIPVDGIVIKGQSYANESMITGEARPVDKSPGDKVISGTINENGCLLVKATHVGSDTALSQIVQLVEAAQLAKAPVQKLADHISRVFVPIVVAVALITWLGWFIPGKAGIFPKDWIPTAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGMGASQGVLIKGGNALEKAHKVTVVVFDKTGTLTVGKPEVVGAVLFSEFSMEELCDVTIAVEVFFYVEYCTYLDI* | 677 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac10g00187 | 676 | ProSitePatterns | Heavy-metal-associated domain. | 105 | 134 | IPR017969 | GO:0046872 | |
Phac10g00187 | 676 | FunFam | Copper-transporting ATPase 1, putative | 395 | 517 | - | - | |
Phac10g00187 | 676 | FunFam | ATPase copper transporting beta | 22 | 95 | - | - | |
Phac10g00187 | 676 | PRINTS | Copper-transporting ATPase 1 signature | 26 | 51 | - | - | |
Phac10g00187 | 676 | PRINTS | Copper-transporting ATPase 1 signature | 52 | 75 | - | - | |
Phac10g00187 | 676 | PRINTS | Copper-transporting ATPase 1 signature | 123 | 144 | - | - | |
Phac10g00187 | 676 | SUPERFAMILY | HMA, heavy metal-associated domain | 170 | 239 | IPR036163 | GO:0046872 | |
Phac10g00187 | 676 | Gene3D | - | 20 | 91 | - | - | |
Phac10g00187 | 676 | CDD | HMA | 28 | 91 | IPR006121 | GO:0046872 | |
Phac10g00187 | 676 | SUPERFAMILY | HMA, heavy metal-associated domain | 22 | 96 | IPR036163 | GO:0046872 | |
Phac10g00187 | 676 | Pfam | E1-E2 ATPase | 420 | 605 | - | - | |
Phac10g00187 | 676 | Gene3D | - | 395 | 517 | - | - | |
Phac10g00187 | 676 | Gene3D | - | 100 | 170 | - | - | |
Phac10g00187 | 676 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 629 | 635 | IPR018303 | - | |
Phac10g00187 | 676 | ProSiteProfiles | Heavy-metal-associated domain profile. | 99 | 165 | IPR006121 | GO:0046872 | |
Phac10g00187 | 676 | NCBIfam | HAD-IC family P-type ATPase | 380 | 658 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Phac10g00187 | 676 | ProSiteProfiles | Heavy-metal-associated domain profile. | 174 | 240 | IPR006121 | GO:0046872 | |
Phac10g00187 | 676 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 20 | 664 | - | - | |
Phac10g00187 | 676 | ProSiteProfiles | Heavy-metal-associated domain profile. | 25 | 91 | IPR006121 | GO:0046872 | |
Phac10g00187 | 676 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 372 | 618 | IPR023298 | - | |
Phac10g00187 | 676 | Gene3D | - | 594 | 660 | IPR023214 | - | |
Phac10g00187 | 676 | NCBIfam | copper ion binding protein | 103 | 162 | IPR006122 | GO:0005507 | |
Phac10g00187 | 676 | NCBIfam | copper ion binding protein | 27 | 90 | IPR006122 | GO:0005507 | |
Phac10g00187 | 676 | SUPERFAMILY | Calcium ATPase, transduction domain A | 427 | 513 | IPR008250 | - | |
Phac10g00187 | 676 | Pfam | Heavy-metal-associated domain | 28 | 88 | IPR006121 | GO:0046872 | |
Phac10g00187 | 676 | Pfam | Heavy-metal-associated domain | 102 | 162 | IPR006121 | GO:0046872 | |
Phac10g00187 | 676 | FunFam | Copper-transporting ATPase HMA5 | 98 | 169 | - | - | |
Phac10g00187 | 676 | ProSitePatterns | Heavy-metal-associated domain. | 31 | 59 | IPR017969 | GO:0046872 | |
Phac10g00187 | 676 | CDD | HMA | 103 | 163 | IPR006121 | GO:0046872 | |
Phac10g00187 | 676 | Gene3D | - | 172 | 248 | - | - | |
Phac10g00187 | 676 | SUPERFAMILY | HMA, heavy metal-associated domain | 95 | 169 | IPR036163 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac10g00187 | Phac-Chr10 | 3242435 | 3248879 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac10g00187 | 29 | 664 | Primary Pumps ATPases | AT1G63440 | 54.829 | 0.0 | 712 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac10g00187 | K17686 | - | gmx:100793894 | 1189.48 |