Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00186 ATGGAACCTAAGGGGATTGGCGAACTCAAGGTACCGTTGTTGCAGGCTCCGGAGGCCTCCACCGCCGCAGTTAGGACAGTCACGTTTCAACTGAGCGACATCAAGTGTGCTTCGTGCGTAAATTCCGTCGAGGCCGTCGTCGGGAGTCTTAACGGCGTCAAAAGCGTTGCCGTTTCGCCGCTTGATGGCCGCGCCGCCATCAAGTTTGACCCCAAGTTGGTTACTGTGAAACAATTAAAAGAAGGCATTGAGGAGAGTGGGTTTGGAGTTCATGAGCTTCATGAGCAGGACATAGCAGTGTGCCGGGTGAGGATTAAAGGAATGGCATGCACAAGCTGCTCTGAGTCCGTTGAGAATGCCCTTCAAATGGTTGAAGGGGTGAAAAAGGCAATAGTTGGTCTTGCTTTGGAGGAGGCAAAAGTACACTTTGATCCTAATCTCACTGATGTTGACAAGATAATTGAGGCCATAGAGGATACAGGTTTTGGAACTGATCTTATTAGCTCTGGGAATGATGCTAACAAAGTGTTTCTAAAGCTTGAAGGTGTCTATACCGCAGAAGATGTAAATTTAGTAATGTCTTCTCTTGAGTTAGCTGTCGGGGTGAACCATGTTGAGATGGATTTGTCAGAACATAAAGTTACAGTTAGCTATGATCCGGATGTCACAGGTCCAAGATCTCTCATTCACTGTGTTCAGGAAGCTAGCTGTGGCCCCAAGAAGTATCAAGCAACCTTATACTCTCCTTCGAGGCAAAGAGGAAGGGATAAGGTGAACGAAATCCGTATGTATAGGGACCAATTTTTGTTCAGCTGCTTATTTTCTGTTCCGGTGTTTGTATTTGCCATGGTGCTTCCCATGCTTCCTCCTTATGGCAACTGGTTAAACTACAGGATCCACAACATGCTTACTCTTGGGCTGTTTTTAAGATGGATTCTTTGCACGCCTGTCCAGTTCATAATTGGCAAAAGGTTCTATGTTGGATCATATCATGCACTGAAGCGAAAATCTGCTAACATGGATGTGCTTGTTGCGCTTGGCACAAATGCTGCTTATTTTTATTCTCTATATATTTTAGTAAAAGCGCTGACTTCGGATACATTTGAAGGACAAGATTTCTTTGAAACAAGTTCTATGTTGATATCCTTTATTCTATTAGGGAAGTATTTGGAAATTGTGGCTAAAGGGAAAACATCGGATGCTTTAGGAAAGCTGACTCAACTTGTTCCTGATAAAGCTTATTTAGTAGCCATTGATACTGATGGAAATATAATCTCTGAGACAGAAATTGACACTCAACTTATACAAAAAAATGACATAATTAAGATTGTTCCTGGGACCAAAATTCCTGTTGATGGTATTGTTATAAAAGGACAAAGCTACGCAAATGAAAGTATGATCACTGGGGAGGCAAGACCTGTTGATAAAAGCCCAGGAGACAAGGTCATCAGTGGAACCATCAATGAAAATGGATGCTTACTGGTTAAGGCCACACATGTTGGATCAGACACTGCACTTTCTCAAATAGTTCAACTCGTTGAAGCTGCTCAACTAGCCAAAGCACCAGTTCAAAAACTTGCTGACCATATTTCAAGGGTTTTTGTTCCAATAGTGGTTGCTGTGGCACTAATAACTTGGCTTGGATGGTTCATTCCTGGCAAAGCTGGTATTTTCCCTAAAGATTGGATACCAACAGCAATGGATGCATTTGAGCTTGCTTTGCAGTTTGCTATTTCTGTGTTGGTTGTTGCTTGCCCATGTGCTTTGGGACTTGCAACACCAACAGCAGTCATGGTTGCTTCAGGCATGGGTGCTTCTCAAGGTGTGCTCATCAAGGGTGGAAATGCACTGGAAAAGGCCCACAAGGTAACAGTTGTTGTGTTTGATAAGACTGGCACACTAACAGTTGGGAAGCCAGAGGTAGTTGGTGCAGTTTTGTTTTCTGAATTTTCCATGGAAGAGTTATGTGACGTGACAATTGCTGTGGAGGCAAGCAGTGAGCACCCGATAGCAAAAGCTGTTGTGGTACATGCAAATAGACTGCGCAAGAAGTTTGGTTCTTCCACAGAGGAAGTCCTGGATGTGGATGATTTTGAGGTACACATGGGAGCTGGTGTAAGGGGAAAAGTTGGTAATAGAACGGTTGTAGTTGGAAACAAGAGACTCATGCATGCTTGTAATATTCCAATAAGTTCTGAGGTTGAGAAGTACATCTCTGAAAATGAAAATCTGGCTAGAACTTGCATTTTAGTTTCAATTGATGGAAAGATTGCTGGTGCATTCTGTGTAACTGATCCTGTAAAGCCAGAGGCTAGACGTGTTGTATCTTTTCTTCACTCCATGGGCATCTCAAGCATCATAGTGACTGGTGATAACCGTGCTACCGCAACTGCTATAGCAAATGAAGTAGGTATTGATGAGGTTTTTGCTGAGACAGATCCTGTTGGCAAAGCTAACAAGTGA 2463 0.432 MEPKGIGELKVPLLQAPEASTAAVRTVTFQLSDIKCASCVNSVEAVVGSLNGVKSVAVSPLDGRAAIKFDPKLVTVKQLKEGIEESGFGVHELHEQDIAVCRVRIKGMACTSCSESVENALQMVEGVKKAIVGLALEEAKVHFDPNLTDVDKIIEAIEDTGFGTDLISSGNDANKVFLKLEGVYTAEDVNLVMSSLELAVGVNHVEMDLSEHKVTVSYDPDVTGPRSLIHCVQEASCGPKKYQATLYSPSRQRGRDKVNEIRMYRDQFLFSCLFSVPVFVFAMVLPMLPPYGNWLNYRIHNMLTLGLFLRWILCTPVQFIIGKRFYVGSYHALKRKSANMDVLVALGTNAAYFYSLYILVKALTSDTFEGQDFFETSSMLISFILLGKYLEIVAKGKTSDALGKLTQLVPDKAYLVAIDTDGNIISETEIDTQLIQKNDIIKIVPGTKIPVDGIVIKGQSYANESMITGEARPVDKSPGDKVISGTINENGCLLVKATHVGSDTALSQIVQLVEAAQLAKAPVQKLADHISRVFVPIVVAVALITWLGWFIPGKAGIFPKDWIPTAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGMGASQGVLIKGGNALEKAHKVTVVVFDKTGTLTVGKPEVVGAVLFSEFSMEELCDVTIAVEASSEHPIAKAVVVHANRLRKKFGSSTEEVLDVDDFEVHMGAGVRGKVGNRTVVVGNKRLMHACNIPISSEVEKYISENENLARTCILVSIDGKIAGAFCVTDPVKPEARRVVSFLHSMGISSIIVTGDNRATATAIANEVGIDEVFAETDPVGKANK* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00186 820 Gene3D - 172 248 - -
Phac10g00186 820 ProSitePatterns Heavy-metal-associated domain. 105 134 IPR017969 GO:0046872
Phac10g00186 820 NCBIfam HAD-IC family P-type ATPase 380 818 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac10g00186 820 Gene3D - 100 170 - -
Phac10g00186 820 NCBIfam heavy metal translocating P-type ATPase 340 819 IPR027256 GO:0006812|GO:0016020|GO:0019829
Phac10g00186 820 Gene3D - 20 91 - -
Phac10g00186 820 SUPERFAMILY Calcium ATPase, transmembrane domain M 372 618 IPR023298 -
Phac10g00186 820 Gene3D - 618 819 IPR023214 -
Phac10g00186 820 FunFam Copper-transporting ATPase 1, putative 395 517 - -
Phac10g00186 820 CDD HMA 28 91 IPR006121 GO:0046872
Phac10g00186 820 PRINTS P-type cation-transporting ATPase superfamily signature 759 770 - -
Phac10g00186 820 PRINTS P-type cation-transporting ATPase superfamily signature 463 477 - -
Phac10g00186 820 PRINTS P-type cation-transporting ATPase superfamily signature 781 791 - -
Phac10g00186 820 PRINTS P-type cation-transporting ATPase superfamily signature 627 641 - -
Phac10g00186 820 Pfam haloacid dehalogenase-like hydrolase 624 818 - -
Phac10g00186 820 Pfam Heavy-metal-associated domain 28 88 IPR006121 GO:0046872
Phac10g00186 820 Pfam Heavy-metal-associated domain 102 162 IPR006121 GO:0046872
Phac10g00186 820 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 20 820 - -
Phac10g00186 820 ProSitePatterns E1-E2 ATPases phosphorylation site. 629 635 IPR018303 -
Phac10g00186 820 SUPERFAMILY HMA, heavy metal-associated domain 170 239 IPR036163 GO:0046872
Phac10g00186 820 ProSiteProfiles Heavy-metal-associated domain profile. 99 165 IPR006121 GO:0046872
Phac10g00186 820 ProSiteProfiles Heavy-metal-associated domain profile. 174 240 IPR006121 GO:0046872
Phac10g00186 820 ProSiteProfiles Heavy-metal-associated domain profile. 25 91 IPR006121 GO:0046872
Phac10g00186 820 NCBIfam copper ion binding protein 103 162 IPR006122 GO:0005507
Phac10g00186 820 NCBIfam copper ion binding protein 27 90 IPR006122 GO:0005507
Phac10g00186 820 SUPERFAMILY HAD-like 614 818 IPR036412 -
Phac10g00186 820 SUPERFAMILY HMA, heavy metal-associated domain 96 169 IPR036163 GO:0046872
Phac10g00186 820 SUPERFAMILY Calcium ATPase, transduction domain A 427 513 IPR008250 -
Phac10g00186 820 Gene3D - 395 517 - -
Phac10g00186 820 Pfam E1-E2 ATPase 420 605 - -
Phac10g00186 820 Gene3D - 638 767 IPR023299 GO:0000166
Phac10g00186 820 SUPERFAMILY HMA, heavy metal-associated domain 23 96 IPR036163 GO:0046872
Phac10g00186 820 FunFam Copper-transporting ATPase HMA5 98 169 - -
Phac10g00186 820 ProSitePatterns Heavy-metal-associated domain. 31 59 IPR017969 GO:0046872
Phac10g00186 820 PRINTS Copper-transporting ATPase 1 signature 123 144 - -
Phac10g00186 820 PRINTS Copper-transporting ATPase 1 signature 26 51 - -
Phac10g00186 820 PRINTS Copper-transporting ATPase 1 signature 52 75 - -
Phac10g00186 820 FunFam ATPase copper transporting beta 22 95 - -
Phac10g00186 820 CDD HMA 103 163 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00186 Phac-Chr10 3240680 3248879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00186 29 820 Primary Pumps ATPases AT1G63440 52.632 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00186 K17686 - gmx:100793894 1457.2