Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00182 ATGGAAAGATATAAAATTTTGAGAGAGCTTGGGGATGGTTCTTGCGGTCATGTATATAAAGCCCGTGATATGCAAACATACGAGATTGTTGCTGTCAAAAAGTTGAAAAGAAAGTTTTGTTTCTGGGAAGAATACACAAATTTAAGAGAAGTTAAGGCCCTCCGTATAATGAATCACCCAAATATCATAAAGTTGAAAGAGGTTGTTAGAGAAAATAATGAACTATTTTTCATTTTTGAATACATGGATTGTAATCTTTATCAATTAATAAAGGAGAGAGAAAATCCATTTTCAGAGGAAGAGATACGGTGCTTTGTGAGGCAAGTGCTACAAGGACTTAGTCATATGCACAAGAAAGGATTCTTTCATCGGGATTTAAAACCTGAGAATTTGCTGGTAACAAATGATGTTCTGAAAATTGCTGATTTTGGACTGGCTAGAGAAGTATCATCGATGCCTCCATATACTCAATATGTTTCCACACGATGGTATCGAGCTCCAGAAGTTTTGCTGCGTGCCCCTTCTTATACTCCTGCTGTTGACATGTGGGCAGTTGGTGCTATATTAGCTGAGCTTTTTACTTTGACCCCTTTATTTCCTGGTGAAAGTGAAATAGATCAACTGTACAAAATATATGGCATTCTTGGGGCGCCACATTCCACTGCTTTCACCTTAGGGGCAAACAACTCTCAATTATTGGACTTAGTTGCTCATGATGTTGTTCCCCCTGTGAAGCTTTCTAACATTATTCCAAATGCTAGTTCGGAAGCTATAGACTTGATGACACAACTGCTACATTGGGACCCATCAAGAAGGCCAGATGCAGATCAGTCATTACAACATCCATTTTTTCATGTGGACGCATGGGTTTCTTGTCCACTCGGTGATCCACTTGAGCTGAAGCTGAGTAGCAAGAGGGCAAAGCCAAATCTCGAGCTGAAACTGCAGGATTTTGGCCCTGATCCCGATGATTGTTTTCTTGGCTTGACTTTAGCTGTAAAGCCCAGTATTTCAAACTTAGATGTGGTCCAAAATGTATCGCAGGGTGTCAGAGAGAACATGCTATTTTGCTCAGATTTTAATGATCATTCAGACCAGTCAGTATTCTGGACCTTATTATCTCCTGATCGAAATGGTGTCGCCAACTCAGCCGAGACTTCACTGTCACTGTCATTCAGTTCAGTGCAACAACATCCGCCAATTGGAGTTCCACAATCAGCGGGATTTTCTTTTCAGCCTTTGCAGCCTAACATCTTAACAACACCATTTTTGGCACTGTCTTCTCCCTTCCAGCGCGGCCACTGCCTTTGA 1311 0.4104 MERYKILRELGDGSCGHVYKARDMQTYEIVAVKKLKRKFCFWEEYTNLREVKALRIMNHPNIIKLKEVVRENNELFFIFEYMDCNLYQLIKERENPFSEEEIRCFVRQVLQGLSHMHKKGFFHRDLKPENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLRAPSYTPAVDMWAVGAILAELFTLTPLFPGESEIDQLYKIYGILGAPHSTAFTLGANNSQLLDLVAHDVVPPVKLSNIIPNASSEAIDLMTQLLHWDPSRRPDADQSLQHPFFHVDAWVSCPLGDPLELKLSSKRAKPNLELKLQDFGPDPDDCFLGLTLAVKPSISNLDVVQNVSQGVRENMLFCSDFNDHSDQSVFWTLLSPDRNGVANSAETSLSLSFSSVQQHPPIGVPQSAGFSFQPLQPNILTTPFLALSSPFQRGHCL* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00182 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Phac10g00182 436 CDD STKc_MAK_like 4 284 - -
Phac10g00182 436 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Phac10g00182 436 FunFam Probable serine/threonine-protein kinase DDB_G0268078 83 292 - -
Phac10g00182 436 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Phac10g00182 436 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00182 436 FunFam Serine/threonine-protein kinase MHK 1 83 - -
Phac10g00182 436 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
Phac10g00182 436 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00182 436 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac10g00182 436 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00182 Phac-Chr10 3198310 3209272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00182 1 284 Core Cell Cycle Gene Families AT3G48750 38.305 1.46e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Phac10g00182 Pkinase 3.7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00182 K08829 K08830 gmx:100792842 822.387