Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00180 ATGGAATTCGCCTCTTCAACATCAAAACTCCCAACGATGTACGATGTGGTGATAAACTTCAATGGAGAAGACATCGAAAGGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCTGCTGTTGGCCTCACCACCTTCCTTCATCACCAGAATGCACAGAACCCAATTCACATCCAACAACCTATTCTCAATCTCTATCGTGTAGCAATTCTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATCAAATGGCACCAAACTTATTGCCGACATGTTCTTCCCGTTTATTACGAAATTCACCCATCTGATGTACGGCTTCAGATGGGTGATTTTGGTAAAGCCTTCAAAGCAACTGCAGAGCAAGAATTCTCAGGACAAGAACTGGAGCATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTATTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTCGACAAAATTGTTAAGACCGTTCTTCATTTACCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGTGTGGAAGATGTGATTCGAACTATAAAAGATAAATCCACGGAAGTTTACACGATAGGGATAAGTGGAGCGGGAGGATCTGGGAAAACCACCCTGGCCAAAGCAATCTACAATCAACTTAGTGCTACATTCACAGAGGGAAGTTTCATTGAAGATATTGGACAAGTTAGTGGAACAAGAGCGGATCTTCGTTTAGAGAAACAACTTCTTTTAGATGTCCTAAAAACAAAGGTGGAGATACCTAGCGGTGAGATGGGGAGAAGAATGATTCAGGACAGACTTTCTGGGAAAAGGGTGCTCATTGTGCTTGACGATATGCCTGAGTCTGGTGCATCATTAGTATGGAAATGGCGTGAATGGTTCAGTGGAGGAACTGTAATAATCATTACAACAAGAGATGTAGACCTACTAAGGATTCTTCGAGTTGATTCTTTTTTTCCGTTAAAGCCGATGAACGCAAACGAGTCCCTTGAGCTTCTTAGTTGGCATGCATTTGGAGAAGCAAAACCAAAAGAAGAATACAATTACCTAGCAAAAAGTGTAGTTAGTCACTGTGGAGGACTACCTCTAGCTCTTGAAGTCATTGGAAGTTGTTTATTTGAAAGGACAAAAGAAGAATGGAATAGTGTTTTGTTAAAATTAGAGAAAATTCCCCTGCACGACATTCAACGGAAATTGAAAATAAGCTTCGATGGTTTACGCAATGAAATGGAAAAAGATTTATTCCTTGATGTATGTTGTTGCTTCGTTGGTGAGGGCAGAGCTTATGTTACCAAGATCCTAAATGACTGTGGAGTAGATGCTGATACTGGAATAAGAGTTCTGATAGAACGTAGCCTCATAAAAGTTAAAAAGAACAACAAACTTGGAATGCATCCTTTGATACAAGAAATGGGAAGAGAAATTATTAGTGAAATTTCAGAAGAGGAATTTTGGGTGGAGAGGAAACTGCAGTTTGATGATGCAGTATATGTGTTGACAGATAATTCAGGGACAAACTCTCGAGCAGTGCCTGTGAAACTGCGTTCAGCCAGAAGAGAACCATCAAGACTGCTGAAACAGGCTGGAGATTCCAAATATCTTTTTGGGAAACTGAGATGGACCAGTTTGCAAAGGTTTTCTGCAGAATACCTATCTAACCACTTTCTGCATTATGCAATAGCGATTGATTTAAAATACAGTCTTCTTCAATTCGTCTGGAAAGAACCACAGGTTTTGAGGTGGCTAAAAGTCCTTAATCTTAGTCACTCCAAGTATTTAACAGAAACGCCTGACTTTTCCGGACTACCAAGTCTTGAACAGCTGATTCTCAAAGATTGTCCAGGATTGCGCGAGGTACACCAATCTATTGGATGTCTCTGCAATCTTACACTGCTAAATTTGAAGGACTGTACAAGTCTGAGTAATCTCCCCAGAGAGATATATATGTTGAAATCTTTAAAAACTCTCATTTTCTCTGGGTGTTCGATGATTGACATATTGGAAAAAGATACAGTGCAAATGGAATCCTTGATAACTCTAATTGCTGAAAATACAGCTGTTAAACAAGTGCCCTTTTCAATTGTAAGATCAAAAAGTATTGGATATATATCCCTATGTGTATTTGAGAGATTGCCACGTAATCTTTTTCCTTCTATCATTCGGTATTGGATGTCGCCACCAATGAATTCAATGTCTTATATTCATTCGTTTTACATGGATATGGAGGATAATAGTTGGGATGACATTACGCCATCGCTTAGCAGCCTGGCAAAACTTCGAAGTATTTTGGTGCAATGTGACACGGAGTTTCAACTATCTAAGCAAGTGCAAAATATTCTGGTCGAATATTTTGCAACTATTACCGAATCAAGCATTTCAAAGCAGCATTTCAGGTCTTCTTTTATTGGTATTGGTGCATACCATGAATTCTTCAATTCTGTCAGCGATTACATATCTGAGGTATCGGCAAGCAGTGAGTCATGTGATGTTTCTCTCCCAGGTGACAATGATCCTTATTGGTTGGCCCATATGGGTGAGGGACATTCTGTTTCTTTCATTGTGCCTCCAGATCGTGACATGAAGGGAATAGCTTTGTGTGTTGTTTATTTATCAACCCCTGAAATCGTGGCAACTGAATGTCTTAAAAGTGTCTTAATTGTTAATTACACAAAGTGTACATTGCATATACACAGGCATGGCACAGTAATTTCCTTCAATGATATAGATTGGCAGGGTATAATGTCAAATTTAGGATCTGGAGACAAGGTGGAGATTTTTTTGAGTTTTGGTCATGGATTGGTAGTCAAGAAAACAGTTGTCTATCCCATATTTGGTGAATCAAATTACTTGAGAAAAGAGCCTGAGCCAAAGGAAAATTCTCTCCTTAGATTCAAAAAGAAAAATGTAATGTGA 2970 0.3943 MEFASSTSKLPTMYDVVINFNGEDIERKFVSHLDSALSAVGLTTFLHHQNAQNPIHIQQPILNLYRVAILVFTKTYSQSAWCLHQLQQIIKWHQTYCRHVLPVYYEIHPSDVRLQMGDFGKAFKATAEQEFSGQELEHGMSRWSHALTKAANLFGWDESNYRSDAELVDKIVKTVLHLPVLSATKFPVGLQSRVEDVIRTIKDKSTEVYTIGISGAGGSGKTTLAKAIYNQLSATFTEGSFIEDIGQVSGTRADLRLEKQLLLDVLKTKVEIPSGEMGRRMIQDRLSGKRVLIVLDDMPESGASLVWKWREWFSGGTVIIITTRDVDLLRILRVDSFFPLKPMNANESLELLSWHAFGEAKPKEEYNYLAKSVVSHCGGLPLALEVIGSCLFERTKEEWNSVLLKLEKIPLHDIQRKLKISFDGLRNEMEKDLFLDVCCCFVGEGRAYVTKILNDCGVDADTGIRVLIERSLIKVKKNNKLGMHPLIQEMGREIISEISEEEFWVERKLQFDDAVYVLTDNSGTNSRAVPVKLRSARREPSRLLKQAGDSKYLFGKLRWTSLQRFSAEYLSNHFLHYAIAIDLKYSLLQFVWKEPQVLRWLKVLNLSHSKYLTETPDFSGLPSLEQLILKDCPGLREVHQSIGCLCNLTLLNLKDCTSLSNLPREIYMLKSLKTLIFSGCSMIDILEKDTVQMESLITLIAENTAVKQVPFSIVRSKSIGYISLCVFERLPRNLFPSIIRYWMSPPMNSMSYIHSFYMDMEDNSWDDITPSLSSLAKLRSILVQCDTEFQLSKQVQNILVEYFATITESSISKQHFRSSFIGIGAYHEFFNSVSDYISEVSASSESCDVSLPGDNDPYWLAHMGEGHSVSFIVPPDRDMKGIALCVVYLSTPEIVATECLKSVLIVNYTKCTLHIHRHGTVISFNDIDWQGIMSNLGSGDKVEIFLSFGHGLVVKKTVVYPIFGESNYLRKEPEPKENSLLRFKKKNVM* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00180 989 Gene3D - 343 426 IPR042197 -
Phac10g00180 989 Gene3D - 175 335 IPR027417 -
Phac10g00180 989 PRINTS Disease resistance protein signature 285 299 - -
Phac10g00180 989 PRINTS Disease resistance protein signature 377 391 - -
Phac10g00180 989 PRINTS Disease resistance protein signature 210 225 - -
Phac10g00180 989 PRINTS Disease resistance protein signature 596 612 - -
Phac10g00180 989 SUPERFAMILY "Winged helix" DNA-binding domain 413 506 IPR036390 -
Phac10g00180 989 SMART AAA_5 207 342 IPR003593 GO:0016887
Phac10g00180 989 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 705 IPR044974 GO:0006952
Phac10g00180 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 436 IPR027417 -
Phac10g00180 989 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Phac10g00180 989 Gene3D Ribonuclease Inhibitor 544 819 IPR032675 -
Phac10g00180 989 Pfam TIR domain 14 180 IPR000157 GO:0007165
Phac10g00180 989 Gene3D - 7 174 IPR035897 -
Phac10g00180 989 SUPERFAMILY L domain-like 531 778 - -
Phac10g00180 989 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Phac10g00180 989 SMART till_3 13 153 IPR000157 GO:0007165
Phac10g00180 989 Pfam NB-ARC domain 192 418 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00180 Phac-Chr10 3187844 3191895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00180 14 713 WRKY Transcription Factor Family AT4G12020 25.881 1.70e-50 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00180 - - vun:114165123 1329.31