Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00174 ATGGAGCTGGAAGAACACTTGCGAGCAATAGCAGCCTCTAAGATTGCAATAATCGTTTTCTCCAAATCATATACTGAATCTACCTGCTGTCTTCTTCAGCTTCAAAAAATCATTGAATGCCAAGAAACTTTTGGCCAAATAGTTCTGCCCATATTTTATGAGATTGACCCATTGGATGTACGTGATCAGAAGGATGATTTTGGAAAAGCGTTGGAAGAAGCTGCACACAAAATCTATTCAGGAGAACAACTGGAACATGCATTGTCAATGTGGAGCCATGCACTCACCAAAGCTGCAGGTATCAGTGGTTGGGATGTCAGAGATCTCAGGCATGATGCTGAACTTGTGGAGCAAATTGTTGGCCACGTTCAGACATTGTTGGGCTATGCAGACTTGCCTATTACCCAATTTCCTGTTGGATTAGACTCTCAGGTGGAAAAGGTGATTAGATGTATTGAAAATCATTCCAGGAAAGTGTGTATGATAGGGATATGGGGAATGGGAGGATCAGGTAAAACTACCATAGCCAAAGCCATCTATAATCGAATTTATCGTCCATTCATCGGTAAGAGTTTTTTTGAAAATATTAGACAAGTTTCGGATCGAGTATTTAGAAGGTGTTATCCTTTGCAAAAAAATCTTCTTTATGATGTCCTAAAATCCAAGCTTGAGGTGGAAAGCGTTTGGATGGGAAGAACTATGATCCAGAACGTACTTTCTCGAAAAAAGTTGTTGATTGTGCTTGATGATGTGAATGAGTTTGACCAATTAGAAAATCTATGCGGGAATCGTGAATGGTTCGGTCAAGGAACTGTGATAATCATTACAACTAGAGATGTTCACGTACTGAACAGACTCAAAGTTGATTATGTTTATAAAATGGATGATATGAACGAAAATGAGTCCCTTGAGCTTTTTAGTTGGCATGCCTTTAGAGAAGCAAAACCAAGAAAAGACTTCAATGAATTTTCAAGAAACATAGTTGCTTACTGTGGAGGACTACCACTAGCTCTTAAGGTCCTTGGTTCCACTTATCGTGAAAATATAGGACCGTGGAAAATTTTATCGTCAAAACTAAAAATATTTTCCGTTGATAATGTTCATAATGTATTAAAAATAAGTTTTGACAGTTTACATGACAGGGATCAGGATATATTTCTTGATGTATGTTGTTTCTTTATTGGTAAAGATAGAGGCTATGTCACAGAGATATTAAATGGCTGTGGACTACCTGCTGATATTGGAATAAGAGTTCTCATAGAGCGTGGTCTCATAAAAGTTGAAAGGAACAACAAACTTCAAATGCATCCTTTGTTACGAGACATGGCAAGACAAATTATTTGTCAACGTTGGCCAAAGAAACTGGGGAAATGGAGTCGATTATGGTTTCAGGATGATGAAAAAGATGCATTGAAAAAGAATAGTGGGACAGAAGCTACCCAGGGATTGTCCCTGAAACTGCATTCAACCAGCAGAGATTGCTTCAAAGCTCGTGCTTTCAAGAAAATGAAGAGATTAAGACTGCTACAACTGGATAATGTACAACTTACTGGAGATTATGGGTACATTTCTAAACAATTGAGATGGATTTGTTGGCAAGGGTTTCGTTCTAAGTACATACCAAATAACTTTCATATGGAAAATGTAATTGCAATTGATTTAAAACATAGTCATCTTCAACTCGTCTGGAAACAACCCCAGGTTTTAAAGTGGCTAAAATTCCTTAATCTTAGTCACTCCAAGTTTTTGAGAGAAACACCTGACTTTTCAGGACTACCAAGTCTTGAAAAGCTCATTCTAAAAGATTGCCCAAGTTTGTGCAAGGTACACCAATCCATTGGAGATCTCCGCAATCTAATACTGATAAATTTGAAAGACTGCACAAGTCTAAGCAATCTCCCCAGAGAGGTATATAAGTTGAAATCTTTAAGAACTTTCATTCTCTCTGGTTGTTTGAAGATTGACATATTCGAAGAAGATATAGCGCAGATGAAATCCTTGATAACTCTAGTTGCTGAAAATACATCTGTGAAACAAGTGCCCTTTTCAATTGTAAGCTCAAAAAGCATTGGATATATATCCCTACGTGGATTTGAAGGATTGTCAACTAGTATTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAACACTAAATCCCCAATCTTTTGTTAGTCCGTTTTGCATGGATATGGAGAATAATAATTGGCGTGACCTTGCGCCATTGCATAGCAGCCTTGCAAATCTTCGCAGTATTTTGGTTCAAGGGGACACGGAGTTTCAACTATCTAATGAAGTGAAAACAATTCTTGTTGAATACGGTGTAAATTTTACAGAATCAAGAATTTCAAAGCATCACTTGAGGTTTTCTTTGATTGGTGTTGGAAGTTACAATGAATTCCTCAATACTCTCAGCAATAACGTTTCTGAGGGATTGGCAAGTAGTGAGTCTTGTGATGTTTCTCTTCCAGGTGATAACCATCCTTATTGGTTGGGCAATGTGGGTGAGGGACAATCAGTTTGTTTCAATGTGCCTCAGGATTGTGACATGAAGGGAATGGTTTTGTGTGTTGTTTATTTATCAACCCCTGAAATAGTGGCAACTGAATGTCTTACAAGTGTCTTAGTGGTTAATTACACAAAGTGCACATTACATATGCACAGGCATGGCAGAGTAATTTCCTTCAATGATGAAGATTGGTATGGCATAATTTCAAATTTAGGATATGGAGACAAGGTGGAGATTTTCGTGACTTTTGGTCATGGATTGGTGGTCAAGAACACAGTTCTGTATTTGATATGTGGTGAATCTAATGACTTGGAAAAAGAACCTGTTGAGTAG 2841 0.3784 MELEEHLRAIAASKIAIIVFSKSYTESTCCLLQLQKIIECQETFGQIVLPIFYEIDPLDVRDQKDDFGKALEEAAHKIYSGEQLEHALSMWSHALTKAAGISGWDVRDLRHDAELVEQIVGHVQTLLGYADLPITQFPVGLDSQVEKVIRCIENHSRKVCMIGIWGMGGSGKTTIAKAIYNRIYRPFIGKSFFENIRQVSDRVFRRCYPLQKNLLYDVLKSKLEVESVWMGRTMIQNVLSRKKLLIVLDDVNEFDQLENLCGNREWFGQGTVIIITTRDVHVLNRLKVDYVYKMDDMNENESLELFSWHAFREAKPRKDFNEFSRNIVAYCGGLPLALKVLGSTYRENIGPWKILSSKLKIFSVDNVHNVLKISFDSLHDRDQDIFLDVCCFFIGKDRGYVTEILNGCGLPADIGIRVLIERGLIKVERNNKLQMHPLLRDMARQIICQRWPKKLGKWSRLWFQDDEKDALKKNSGTEATQGLSLKLHSTSRDCFKARAFKKMKRLRLLQLDNVQLTGDYGYISKQLRWICWQGFRSKYIPNNFHMENVIAIDLKHSHLQLVWKQPQVLKWLKFLNLSHSKFLRETPDFSGLPSLEKLILKDCPSLCKVHQSIGDLRNLILINLKDCTSLSNLPREVYKLKSLRTFILSGCLKIDIFEEDIAQMKSLITLVAENTSVKQVPFSIVSSKSIGYISLRGFEGLSTSIFPSIIRSWMSPTLNPQSFVSPFCMDMENNNWRDLAPLHSSLANLRSILVQGDTEFQLSNEVKTILVEYGVNFTESRISKHHLRFSLIGVGSYNEFLNTLSNNVSEGLASSESCDVSLPGDNHPYWLGNVGEGQSVCFNVPQDCDMKGMVLCVVYLSTPEIVATECLTSVLVVNYTKCTLHMHRHGRVISFNDEDWYGIISNLGYGDKVEIFVTFGHGLVVKNTVLYLICGESNDLEKEPVE* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00174 946 Gene3D - 127 291 IPR027417 -
Phac10g00174 946 Gene3D - 2 126 IPR035897 -
Phac10g00174 946 Gene3D Ribonuclease Inhibitor 449 773 IPR032675 -
Phac10g00174 946 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 673 IPR044974 GO:0006952
Phac10g00174 946 PRINTS Disease resistance protein signature 331 345 - -
Phac10g00174 946 PRINTS Disease resistance protein signature 238 252 - -
Phac10g00174 946 PRINTS Disease resistance protein signature 614 630 - -
Phac10g00174 946 PRINTS Disease resistance protein signature 161 176 - -
Phac10g00174 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 388 IPR027417 -
Phac10g00174 946 SUPERFAMILY L domain-like 449 753 - -
Phac10g00174 946 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 104 IPR035897 -
Phac10g00174 946 Pfam TIR domain 8 123 IPR000157 GO:0007165
Phac10g00174 946 Pfam NB-ARC domain 143 365 IPR002182 GO:0043531
Phac10g00174 946 Gene3D - 296 379 IPR042197 -
Phac10g00174 946 ProSiteProfiles TIR domain profile. 1 127 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00174 Phac-Chr10 3124003 3127954 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00174 9 706 WRKY Transcription Factor Family AT4G12020 29.167 2.47e-72 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00174 - - pvu:PHAVU_010G027900g 1611.66