Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00171 ATGGGAAAAAGAATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGTTCATTGTACTTGACGATGTGCCTGAGTTTTGTGCATTACTCGACATATGGGAATGCCGCCGTTGCTTCAGTGGAGGAACTATAATAATAATTACAACGAGAGATGAACACATACTGAGGATACATGAAGTTGATTCTGTTTATCGGATAACTCCAATGAGCCCAAACGAATCCCTTGAGCTTCTTAGCTGGTACGCATTTAGAGAACCAAAACCAAAAGAAGAATACCATTTCCTTGCAAAAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTTGCTCTTGAAGTCATTGGAAGTTACTTATATGAAAGGAAGAAAAAAGAATGGGATAGAGTAATTTTAAGATTAGACAATATTCCTCAGCATGAAATGTCACATATATTGAAAATAAGCTTCGACGGTTTACATAGTGAAATGGAAAAAGATTTATTTCTTGATGTGTGTTGTTTCTTTGTTGGTAAAAGCAGAGCCTATGTTACCAAGATCCTAAGTGGCTGTGGAGTAGACCATGATAGTGGAATAAGAGTTCTCATACAGCGTAACCTCATAAAAGTTAAAGAAAACAACAAATTTGGAATGCATCATTTGCTACGAGAAATGGGAAGAGAAATTATTCGTCGAATTTCAGGAAAGGGACCTGAGGAACCTGGGAAGAGAAGTCGACTGTGGCTTGATGAGGATATGGAACATGCGCTATCTGATAATACTCTCTTTTCGTCACAGGAGACAAAAGTCATTCAGAGATTGCCTTTGAAAATGCTTTTAACAACAAAAGATTTCTTCCACCGTTATCCTTTAGTGGTAAGAGACACATCAAGACTGCTGAGATTCGCAGAAAATTATGAGTACCACTATACGAAACTGAGATGGTTCAGTTTGCAAGGGTTTTCTTCAGAACACCTTCCTAATGACTTTTTTCTGCATTATGCAATAGCAATTGATTTAAAATACAGTCTTCTTCAATTCGTCTGGAATGAACCCCAGGTTTTGGCGTGGCTAAAAGTCCTTAATCTTAGTCACTCCAAGTACTTGACAAAAACCCCTGATATTTCGAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGCCCAGAATTGCGCGAAGTACACCCTTCTATTGGATGTCTCCGCAATCTTATACTGCTAAATTTGAAGGATTGTACAAGTCTAAGCAATCTGCCCAGAAAGATATATAAGTTGAAGTCTTTGAAAACTCTCATTCTCTCTGGTTGTTCGAAGATTGACCTATTGGAAAAAGATATAGTGCAGATGGAATCATTGATAACACTAATTGCTGAAAATACAGCTGTCAAACAAGTGCCTTTTTCAATTGTATACTCAAAAAGCATTGGATATATATCCCTTAGTGGATTTGAGGGATTGTCACATAATCTTTTTCCTTCTATCATTAGGTCTTGGATATCACCAACAATGGATCCCCTATCTTATATACATTTGGTTTATGAGGAGGATAGTAGTTGGGATGATATTGCACCGTTGTTTAAAATTCTTTCAAATCTTCGAAGTGTTTTGGTGCAATGTGATACCGAGTTTCAGCAATCTAAGCAAGTAAAAACTATTCTGGTTGAATATGGTGCAAATATTTCAGAATCAGGAATTTCAAAGTATCACTTGAGGTCTTCTTTCCTTGGTTTTGGAAGATACAATGAACTCTTCAATACTGTGAACGATAGCATATCTAAGGTATTGGTAAGCAGTGAGTCTTGTGATGTTTCTCTCCCGGGTGACAATGATCCTTATTGGTTGGCCCATAAGGGTGAGGGACATTCTGTTTCTTTCACTATACCTGGAGATCGTGAGATAAAGGGAATGGCTTTGTGTGTTGTTTATTTATCAACCTCCAAAATCATTGAACCCAAACTTACTACTGTCTTAATTGTTAATTACACAAAGTGCACGTTACATATGCACAAGCATGACGCAGTAATTTCCTTTAATGATGAAGATTGGCATGGCATAATGTCAAGTTTAGGATCAGGAGACAACGTGGAGATTTTTGTGACTTTTGGTCATGGATTGGTGGTTAACACAGTTGCCTATCTGATATATGGCGAATCAAATGACTTGGAAATGGATTCTTGCCTTGAGCTAAAGGAAAATACCTTAATTAAATTCTTTAAGAAAATGGTAATGTGTGACTTCTGCTGA 2217 0.3744 MGKRMIRERLSGKRVFIVLDDVPEFCALLDIWECRRCFSGGTIIIITTRDEHILRIHEVDSVYRITPMSPNESLELLSWYAFREPKPKEEYHFLAKRVVAYCGGLPLALEVIGSYLYERKKKEWDRVILRLDNIPQHEMSHILKISFDGLHSEMEKDLFLDVCCFFVGKSRAYVTKILSGCGVDHDSGIRVLIQRNLIKVKENNKFGMHHLLREMGREIIRRISGKGPEEPGKRSRLWLDEDMEHALSDNTLFSSQETKVIQRLPLKMLLTTKDFFHRYPLVVRDTSRLLRFAENYEYHYTKLRWFSLQGFSSEHLPNDFFLHYAIAIDLKYSLLQFVWNEPQVLAWLKVLNLSHSKYLTKTPDISRLPSLEQLILKDCPELREVHPSIGCLRNLILLNLKDCTSLSNLPRKIYKLKSLKTLILSGCSKIDLLEKDIVQMESLITLIAENTAVKQVPFSIVYSKSIGYISLSGFEGLSHNLFPSIIRSWISPTMDPLSYIHLVYEEDSSWDDIAPLFKILSNLRSVLVQCDTEFQQSKQVKTILVEYGANISESGISKYHLRSSFLGFGRYNELFNTVNDSISKVLVSSESCDVSLPGDNDPYWLAHKGEGHSVSFTIPGDREIKGMALCVVYLSTSKIIEPKLTTVLIVNYTKCTLHMHKHDAVISFNDEDWHGIMSSLGSGDNVEIFVTFGHGLVVNTVAYLIYGESNDLEMDSCLELKENTLIKFFKKMVMCDFC* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00171 738 Pfam NB-ARC domain 3 137 IPR002182 GO:0043531
Phac10g00171 738 PRINTS Disease resistance protein signature 102 116 - -
Phac10g00171 738 PRINTS Disease resistance protein signature 414 430 - -
Phac10g00171 738 PRINTS Disease resistance protein signature 9 23 - -
Phac10g00171 738 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 454 IPR044974 GO:0006952
Phac10g00171 738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 161 IPR027417 -
Phac10g00171 738 Gene3D Ribonuclease Inhibitor 285 574 IPR032675 -
Phac10g00171 738 Gene3D - 1 62 IPR027417 -
Phac10g00171 738 SUPERFAMILY L domain-like 208 525 - -
Phac10g00171 738 Gene3D - 68 151 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00171 Phac-Chr10 3115277 3119828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00171 5 432 WRKY Transcription Factor Family AT5G45050 29.204 7.27e-49 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00171 - - pvu:PHAVU_010G029600g 955.281