Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g00170 ATGTTCTGCCCGTTTATTACGAAATTCACCCATCTCATGTACGTCTTCAGATGGGTGATTTTGGTAAAGCTTTCAAAGAAACGGCACACCAAACATTCTCAGGACAACAACTGGAGCATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTATTTGGATGGGATGAGAGCAATCACAGTTGGATTACAATACCAAGTGGAGGATCTGATTGGAACTATCAAAAGTAAATCCACGGAAGATTGTAGGATAGCGATATGTGGACAGGGAGGATGTGGTAAAACCACCCTTGCAAAAGCCATCTATAATCAAATTCATGGTACATTCACGGAGAAAAGTTTCATTGAAGATATTGGACAATTTAGTGGAATAAGAGGGGATCTTCGTTTACAAGAACAACTTCTTTCAGATGTCCTAAAAACAAAGGTGAAGATAAGCAGCGTTGAGATGGGAAAAAGAATGATTCGGGAAAGACTTTCTGGGAAAAGGGTGTTCATTGTACTTGACGATGTGCCTGAGTTTTGTGCATTACTCGACATATGGGAATGCCGCCGTTGCTTCAGTGGAGGAACTATAATAATAATTACAACGAGAGATGAACACATACTGAGGATACATGAAGTTGATTCTGTTTATCGGATAACTCCAATGAGCCCAAACGAATCCCTTGAGCTTCTTAGCTGGTACGCATTTAGAGAACCAAAACCAAAAGAAGAATACCATTTCCTTGCAAAAAGAGTAGTTGCTTATTGTGGAGGACTACCTCTTGCTCTTGAAGTCATTGGAAGTTACTTATATGAAAGGAAGAAAAAAGAATGGGATAGAGTAATTTTAAGATTAGACAATATTCCTCAGCATGAAATGTCACATATATTGAAAATAAGCTTCGACGGTTTACATAGTGAAATGGAAAAAGATTTATTTCTTGATGTGTGTTGTTTCTTTGTTGGTAAAAGCAGAGCCTATGTTACCAAGATCCTAAGTGGCTGTGGAGTAGACCATGATAGTGGAATAAGAGTTCTCATACAGCGTAACCTCATAAAAGTTAAAGAAAACAACAAATTTGGAATGCATCATTTGCTACGAGAAATGGGAAGAGAAATTATTCGTCGAATTTCAGGAAAGGGACCTGAGGAACCTGGGAAGAGAAGTCGACTGTGGCTTGATGAGGATATGGAACATGCGCTATCTGATAATACTCTCTTTTCGTCACAGGAGACAAAAGTCATTCAGAGATTGCCTTTGAAAATGCTTTTAACAACAAAAGATTTCTTCCACCGTTATCCTTTAGTGGTAAGAGACACATCAAGACTGCTGAGATTCGCAGAAAATTATGAGTACCACTATACGAAACTGAGATGGTTCAGTTTGCAAGGGTTTTCTTCAGAACACCTTCCTAATGACTTTTTTCTGCATTATGCAATAGCAATTGATTTAAAATACAGTCTTCTTCAATTCGTCTGGAATGAACCCCAGGTTTTGGCGTGGCTAAAAGTCCTTAATCTTAGTCACTCCAAGTACTTGACAAAAACCCCTGATATTTCGAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGCCCAGAATTGCGCGAAGTACACCCTTCTATTGGATGTCTCCGCAATCTTATACTGCTAAATTTGAAGGATTGTACAAGTCTAAGCAATCTGCCCAGAAAGATATATAAGTTGAAGTCTTTGAAAACTCTCATTCTCTCTGGTTGTTCGAAGATTGACCTATTGGAAAAAGATATAGTGCAGATGGAATCATTGATAACACTAATTGCTGAAAATACAGCTGTCAAACAAGTGCCTTTTTCAATTGTATACTCAAAAAGCATTGGATATATATCCCTTAGTGGATTTGAGGGATTGTCACATAATCTTTTTCCTTCTATCATTAGGTCTTGGATATCACCAACAATGGATCCCCTATCTTATATACATTTGGTTTATGAGGAGGATAGTAGTTGGGATGATATTGCACCGTTGTTTAAAATTCTTTCAAATCTTCGAAGTGTTTTGGTGCAATGTGATACCGAGTTTCAGCAATCTAAGCAAGTAAAAACTATTCTGGTTGAATATGGTGCAAATATTTCAGAATCAGGAATTTCAAAGTATCACTTGAGGTCTTCTTTCCTTGGTTTTGGAAGATACAATGAACTCTTCAATACTGTGAACGATAGCATATCTAAGGTATTGGTAAGCAGTGAGTCTTGTGATGTTTCTCTCCCGGGTGACAATGATCCTTATTGGTTGGCCCATAAGGGTGAGGGACATTCTGTTTCTTTCACTATACCTGGAGATCGTGAGATAAAGGGAATGGCTTTGTGTGTTGTTTATTTATCAACCTCCAAAATCATTGAACCCAAACTTACTACTGTCTTAATTGTTAATTACACAAAGTGCACGTTACATATGCACAAGCATGACGCAGTAATTTCCTTTAATGATGAAGATTGGCATGGCATAATGTCAAGTTTAGGATCAGGAGACAACGTGGAGATTTTTGTGACTTTTGGTCATGGATTGGTGGTTAACACAGTTGCCTATCTGATATATGGCGAATCAAATGACTTGGAAATGGATTCTTGCCTTGAGCTAAAGGAAAATACCTTAATTAAATTCTTTAAGAAAATGGTAATGTGTGACTTCTGCTGA 2673 0.3808 MFCPFITKFTHLMYVFRWVILVKLSKKRHTKHSQDNNWSMACPGGATHSPKLQIYLDGMRAITVGLQYQVEDLIGTIKSKSTEDCRIAICGQGGCGKTTLAKAIYNQIHGTFTEKSFIEDIGQFSGIRGDLRLQEQLLSDVLKTKVKISSVEMGKRMIRERLSGKRVFIVLDDVPEFCALLDIWECRRCFSGGTIIIITTRDEHILRIHEVDSVYRITPMSPNESLELLSWYAFREPKPKEEYHFLAKRVVAYCGGLPLALEVIGSYLYERKKKEWDRVILRLDNIPQHEMSHILKISFDGLHSEMEKDLFLDVCCFFVGKSRAYVTKILSGCGVDHDSGIRVLIQRNLIKVKENNKFGMHHLLREMGREIIRRISGKGPEEPGKRSRLWLDEDMEHALSDNTLFSSQETKVIQRLPLKMLLTTKDFFHRYPLVVRDTSRLLRFAENYEYHYTKLRWFSLQGFSSEHLPNDFFLHYAIAIDLKYSLLQFVWNEPQVLAWLKVLNLSHSKYLTKTPDISRLPSLEQLILKDCPELREVHPSIGCLRNLILLNLKDCTSLSNLPRKIYKLKSLKTLILSGCSKIDLLEKDIVQMESLITLIAENTAVKQVPFSIVYSKSIGYISLSGFEGLSHNLFPSIIRSWISPTMDPLSYIHLVYEEDSSWDDIAPLFKILSNLRSVLVQCDTEFQQSKQVKTILVEYGANISESGISKYHLRSSFLGFGRYNELFNTVNDSISKVLVSSESCDVSLPGDNDPYWLAHKGEGHSVSFTIPGDREIKGMALCVVYLSTSKIIEPKLTTVLIVNYTKCTLHMHKHDAVISFNDEDWHGIMSSLGSGDNVEIFVTFGHGLVVNTVAYLIYGESNDLEMDSCLELKENTLIKFFKKMVMCDFC* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g00170 890 Gene3D Ribonuclease Inhibitor 437 726 IPR032675 -
Phac10g00170 890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 313 IPR027417 -
Phac10g00170 890 Gene3D - 220 303 IPR042197 -
Phac10g00170 890 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 59 605 IPR044974 GO:0006952
Phac10g00170 890 SUPERFAMILY L domain-like 360 677 - -
Phac10g00170 890 SMART AAA_5 83 221 IPR003593 GO:0016887
Phac10g00170 890 PRINTS Disease resistance protein signature 86 101 - -
Phac10g00170 890 PRINTS Disease resistance protein signature 161 175 - -
Phac10g00170 890 PRINTS Disease resistance protein signature 566 582 - -
Phac10g00170 890 PRINTS Disease resistance protein signature 254 268 - -
Phac10g00170 890 Pfam NB-ARC domain 67 289 IPR002182 GO:0043531
Phac10g00170 890 Gene3D - 56 213 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g00170 Phac-Chr10 3115277 3119828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g00170 87 584 WRKY Transcription Factor Family AT5G45050 29.885 3.32e-58 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g00170 - - pvu:PHAVU_010G029600g 1044.26